RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 SCN11AQ9UI33 1791 aa27.56■■■□□ 2
PDXDC1-213ENST00000566426 VEGFAP15692 232 aaPredicted RBP27.56■■■□□ 2
PDXDC1-213ENST00000566426 IL13P35225 146 aa27.56■■■□□ 2
PDXDC1-213ENST00000566426 RASSF7Q02833 373 aa27.56■■■□□ 2
PDXDC1-213ENST00000566426 NFIXQ14938 502 aa27.56■■■□□ 2
PDXDC1-213ENST00000566426 GLTPD2A6NH11 291 aa27.55■■■□□ 2
PDXDC1-213ENST00000566426 CYP19A1P11511 503 aaPredicted RBP27.55■■■□□ 2
PDXDC1-213ENST00000566426 TTLL6Q8N841 843 aa27.54■■■□□ 2
PDXDC1-213ENST00000566426 ADAMTS7Q9UKP4 1686 aa27.54■■■□□ 2
PDXDC1-213ENST00000566426 KNSTRNQ9Y448 316 aa27.54■■■□□ 2
PDXDC1-213ENST00000566426 SERPINB2P05120 415 aa27.53■■■□□ 2
PDXDC1-213ENST00000566426 LGR6Q9HBX8 967 aa27.53■■■□□ 2
PDXDC1-213ENST00000566426 COL15A1P39059 1388 aa27.52■■■□□ 2
PDXDC1-213ENST00000566426 CLSPNQ9HAW4 1339 aa27.52■■■□□ 2
PDXDC1-213ENST00000566426 H0YIN7 160 aa27.51■■□□□ 1.99
PDXDC1-213ENST00000566426 RNMTO43148 476 aaKnown RBP27.51■■□□□ 1.99
PDXDC1-213ENST00000566426 SLC39A6Q13433 755 aa27.51■■□□□ 1.99
PDXDC1-213ENST00000566426 HSPA5P11021 654 aaKnown RBP27.5■■□□□ 1.99
PDXDC1-213ENST00000566426 C2CD5Q86YS7 1000 aa27.5■■□□□ 1.99
PDXDC1-213ENST00000566426 TNS4Q8IZW8 715 aa27.5■■□□□ 1.99
PDXDC1-213ENST00000566426 VSIG10Q8N0Z9 540 aa27.5■■□□□ 1.99
PDXDC1-213ENST00000566426 ZBTB1Q9Y2K1 713 aa27.5■■□□□ 1.99
PDXDC1-213ENST00000566426 AFDNP55196 1824 aaKnown RBP27.48■■□□□ 1.99
PDXDC1-213ENST00000566426 PCNTO95613 3336 aa27.48■■□□□ 1.99
PDXDC1-213ENST00000566426 DPY19L2Q6NUT2 758 aa27.47■■□□□ 1.99
PDXDC1-213ENST00000566426 BCL2L12Q9HB09 334 aa27.47■■□□□ 1.99
PDXDC1-213ENST00000566426 NRXN2Q9P2S2 1712 aa27.47■■□□□ 1.99
PDXDC1-213ENST00000566426 MRC1P22897 1456 aa27.45■■□□□ 1.99
PDXDC1-213ENST00000566426 CAPN15O75808 1086 aa27.45■■□□□ 1.98
PDXDC1-213ENST00000566426 STARD3NLO95772 234 aa27.45■■□□□ 1.98
PDXDC1-213ENST00000566426 PDZRN3Q9UPQ7 1066 aa27.45■■□□□ 1.98
PDXDC1-213ENST00000566426 A0A087WZG4 1122 aa27.44■■□□□ 1.98
PDXDC1-213ENST00000566426 CANXP27824 592 aaKnown RBP27.44■■□□□ 1.98
PDXDC1-213ENST00000566426 PRELPP51888 382 aa27.44■■□□□ 1.98
PDXDC1-213ENST00000566426 HMOX1P09601 288 aa27.43■■□□□ 1.98
PDXDC1-213ENST00000566426 DLEC1Q9Y238 1755 aa27.43■■□□□ 1.98
PDXDC1-213ENST00000566426 NFKBIEO00221 500 aa27.42■■□□□ 1.98
PDXDC1-213ENST00000566426 BICDL1Q6ZP65 573 aa27.42■■□□□ 1.98
PDXDC1-213ENST00000566426 TTC5Q8N0Z6 440 aa27.42■■□□□ 1.98
PDXDC1-213ENST00000566426 MTHFSDQ2M296 383 aaKnown RBP27.41■■□□□ 1.98
PDXDC1-213ENST00000566426 HSPA1AP0DMV8 641 aaKnown RBP27.4■■□□□ 1.98
PDXDC1-213ENST00000566426 HSPA1BP0DMV9 641 aaKnown RBP27.4■■□□□ 1.98
PDXDC1-213ENST00000566426 PDE6BP35913 854 aa27.4■■□□□ 1.98
PDXDC1-213ENST00000566426 ZNF622Q969S3 477 aaKnown RBP eCLIP27.4■■□□□ 1.988e-15■□□□□ 9.6
PDXDC1-213ENST00000566426 CCDC88AQ3V6T2 1871 aa27.39■■□□□ 1.98
PDXDC1-213ENST00000566426 EIF5P55010 431 aaKnown RBP27.39■■□□□ 1.98
PDXDC1-213ENST00000566426 BRIP1Q9BX63 1249 aa27.39■■□□□ 1.98
PDXDC1-213ENST00000566426 AMER1Q5JTC6 1135 aaPredicted RBP27.38■■□□□ 1.97
PDXDC1-213ENST00000566426 TEX13AQ9BXU3 409 aaPredicted RBP27.38■■□□□ 1.97
PDXDC1-213ENST00000566426 CARMIL3Q8ND23 1372 aa27.37■■□□□ 1.97
PDXDC1-213ENST00000566426 ERFEQ4G0M1 354 aa27.37■■□□□ 1.97
PDXDC1-213ENST00000566426 TIAM2Q8IVF5 1701 aa27.37■■□□□ 1.97
PDXDC1-213ENST00000566426 POTECB2RU33 542 aa27.36■■□□□ 1.97
PDXDC1-213ENST00000566426 DIAPH1O60610 1272 aaKnown RBP27.36■■□□□ 1.97
PDXDC1-213ENST00000566426 PCGF6Q9BYE7 350 aa27.36■■□□□ 1.97
PDXDC1-213ENST00000566426 VIRMAQ69YN4 1812 aaKnown RBP27.35■■□□□ 1.97
PDXDC1-213ENST00000566426 C21orf2O43822 256 aa27.35■■□□□ 1.97
PDXDC1-213ENST00000566426 TBC1D9BQ66K14 1250 aa27.35■■□□□ 1.97
PDXDC1-213ENST00000566426 NPM2Q86SE8 214 aaKnown RBP27.35■■□□□ 1.97
PDXDC1-213ENST00000566426 TEFQ10587 303 aa27.33■■□□□ 1.97
PDXDC1-213ENST00000566426 ZNF219Q9P2Y4 722 aaPredicted RBP27.33■■□□□ 1.97
PDXDC1-213ENST00000566426 PRR5LQ6MZQ0 368 aa27.32■■□□□ 1.96
PDXDC1-213ENST00000566426 ZNF330Q9Y3S2 320 aaPredicted RBP27.32■■□□□ 1.96
PDXDC1-213ENST00000566426 UBR2Q8IWV8 1755 aa27.32■■□□□ 1.96
PDXDC1-213ENST00000566426 NPHP1O15259 732 aa27.31■■□□□ 1.96
PDXDC1-213ENST00000566426 IL6STP40189 918 aaPredicted RBP27.31■■□□□ 1.96
PDXDC1-213ENST00000566426 CHADLQ6NUI6 762 aa27.31■■□□□ 1.96
PDXDC1-213ENST00000566426 ZNF790Q6PG37 636 aa27.31■■□□□ 1.96
PDXDC1-213ENST00000566426 CNKSR1Q969H4 720 aa27.31■■□□□ 1.96
PDXDC1-213ENST00000566426 ZNF496Q96IT1 587 aaPredicted RBP27.31■■□□□ 1.96
PDXDC1-213ENST00000566426 TAOK3Q9H2K8 898 aa27.31■■□□□ 1.96
PDXDC1-213ENST00000566426 TBC1D2BQ9UPU7 963 aa27.31■■□□□ 1.96
PDXDC1-213ENST00000566426 LTBP3Q9NS15 1303 aa27.31■■□□□ 1.96
PDXDC1-213ENST00000566426 SETDB2Q96T68 719 aa27.3■■□□□ 1.96
PDXDC1-213ENST00000566426 CREBZFQ9NS37 354 aa27.3■■□□□ 1.96
PDXDC1-213ENST00000566426 HEG1Q9ULI3 1381 aa27.3■■□□□ 1.96
PDXDC1-213ENST00000566426 SOGA3Q5TF21 947 aa27.29■■□□□ 1.96
PDXDC1-213ENST00000566426 DICER1Q9UPY3 1922 aaKnown RBP27.28■■□□□ 1.96
PDXDC1-213ENST00000566426 CNBD1Q8NA66 436 aa27.28■■□□□ 1.96
PDXDC1-213ENST00000566426 GAS2L2Q8NHY3 880 aa27.28■■□□□ 1.96
PDXDC1-213ENST00000566426 GNAT3A8MTJ3 354 aa27.27■■□□□ 1.96
PDXDC1-213ENST00000566426 ST5P78524 1137 aa27.27■■□□□ 1.96
PDXDC1-213ENST00000566426 STYK1Q6J9G0 422 aa27.27■■□□□ 1.96
PDXDC1-213ENST00000566426 CCDC24Q8N4L8 307 aa27.27■■□□□ 1.96
PDXDC1-213ENST00000566426 FER1L6Q2WGJ9 1857 aa27.27■■□□□ 1.96
PDXDC1-213ENST00000566426 ANKRD31Q8N7Z5 1873 aa27.27■■□□□ 1.96
PDXDC1-213ENST00000566426 FMNL2Q96PY5 1086 aa27.26■■□□□ 1.95
PDXDC1-213ENST00000566426 IL17REQ8NFR9 667 aa27.25■■□□□ 1.95
PDXDC1-213ENST00000566426 IQCA1LA6NCM1 817 aa27.24■■□□□ 1.95
PDXDC1-213ENST00000566426 DDNO94850 711 aaPredicted RBP27.24■■□□□ 1.95
PDXDC1-213ENST00000566426 MASTLQ96GX5 879 aa27.24■■□□□ 1.95
PDXDC1-213ENST00000566426 MKRN1Q9UHC7 482 aaKnown RBP27.24■■□□□ 1.95
PDXDC1-213ENST00000566426 SCN7AQ01118 1682 aa27.24■■□□□ 1.95
PDXDC1-213ENST00000566426 SRGNP10124 158 aa27.23■■□□□ 1.95
PDXDC1-213ENST00000566426 PRPF40BQ6NWY9 871 aaKnown RBP27.23■■□□□ 1.95
PDXDC1-213ENST00000566426 U2SURPO15042 1029 aaKnown RBP27.22■■□□□ 1.95
PDXDC1-213ENST00000566426 CAMTA2O94983 1202 aa27.22■■□□□ 1.95
PDXDC1-213ENST00000566426 A1BGP04217 495 aa27.22■■□□□ 1.95
PDXDC1-213ENST00000566426 CC2D1BQ5T0F9 858 aaKnown RBP27.22■■□□□ 1.95
PDXDC1-213ENST00000566426 COL11A2P13942 1736 aaPredicted RBP27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms