RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 KCNQ3O43525 872 aa28.54■■■□□ 2.16
SPG7-214ENST00000566371 NLGN2Q8NFZ4 835 aa28.54■■■□□ 2.16
SPG7-214ENST00000566371 COL15A1P39059 1388 aa28.53■■■□□ 2.16
SPG7-214ENST00000566371 UTRNP46939 3433 aa28.51■■■□□ 2.15
SPG7-214ENST00000566371 PNISRQ8TF01 805 aaKnown RBP28.51■■■□□ 2.15
SPG7-214ENST00000566371 KDM3BQ7LBC6 1761 aa28.5■■■□□ 2.15
SPG7-214ENST00000566371 SRP68Q9UHB9 627 aaKnown RBP28.5■■■□□ 2.15
SPG7-214ENST00000566371 ZPR1O75312 459 aa28.49■■■□□ 2.15
SPG7-214ENST00000566371 SNRPA1P09661 255 aaKnown RBP28.48■■■□□ 2.15
SPG7-214ENST00000566371 CANXP27824 592 aaKnown RBP28.48■■■□□ 2.15
SPG7-214ENST00000566371 TMPOP42166 694 aaKnown RBP28.48■■■□□ 2.15
SPG7-214ENST00000566371 RIPK4P57078 832 aa28.48■■■□□ 2.15
SPG7-214ENST00000566371 RUNDC1Q96C34 613 aa28.48■■■□□ 2.15
SPG7-214ENST00000566371 NARFQ9UHQ1 456 aa28.48■■■□□ 2.15
SPG7-214ENST00000566371 ADAMTS8Q9UP79 889 aa28.48■■■□□ 2.15
SPG7-214ENST00000566371 GOLGB1Q14789 3259 aaKnown RBP28.48■■■□□ 2.15
SPG7-214ENST00000566371 KIF13BQ9NQT8 1826 aa28.48■■■□□ 2.15
SPG7-214ENST00000566371 EIF5P55010 431 aaKnown RBP28.47■■■□□ 2.15
SPG7-214ENST00000566371 LMOD3Q0VAK6 560 aa28.47■■■□□ 2.15
SPG7-214ENST00000566371 FKBP8Q14318 412 aa28.47■■■□□ 2.15
SPG7-214ENST00000566371 A0A087WZG4 1122 aa28.46■■■□□ 2.15
SPG7-214ENST00000566371 THUMPD2Q9BTF0 503 aaKnown RBP28.46■■■□□ 2.15
SPG7-214ENST00000566371 PARP3Q9Y6F1 533 aa28.46■■■□□ 2.15
SPG7-214ENST00000566371 IL6STP40189 918 aaPredicted RBP28.45■■■□□ 2.14
SPG7-214ENST00000566371 GPR162Q16538 588 aa28.45■■■□□ 2.14
SPG7-214ENST00000566371 USPL1Q5W0Q7 1092 aa28.45■■■□□ 2.14
SPG7-214ENST00000566371 CCDC146Q8IYE0 955 aa28.45■■■□□ 2.14
SPG7-214ENST00000566371 MIS18AQ9NYP9 233 aa28.45■■■□□ 2.14
SPG7-214ENST00000566371 C10orf71Q711Q0 1435 aa28.43■■■□□ 2.14
SPG7-214ENST00000566371 USP16Q9Y5T5 823 aa28.43■■■□□ 2.14
SPG7-214ENST00000566371 LAMB4A4D0S4 1761 aa28.42■■■□□ 2.14
SPG7-214ENST00000566371 A1BGP04217 495 aa28.42■■■□□ 2.14
SPG7-214ENST00000566371 PRAMEF22A3QJZ6 481 aa28.41■■■□□ 2.14
SPG7-214ENST00000566371 TM4SF1P30408 202 aa28.41■■■□□ 2.14
SPG7-214ENST00000566371 SCN7AQ01118 1682 aa28.41■■■□□ 2.14
SPG7-214ENST00000566371 DDR1Q08345 913 aa28.4■■■□□ 2.14
SPG7-214ENST00000566371 BABAM1Q9NWV8 329 aa28.4■■■□□ 2.14
SPG7-214ENST00000566371 BCL2L12Q9HB09 334 aa28.39■■■□□ 2.14
SPG7-214ENST00000566371 RRP7AQ9Y3A4 280 aaKnown RBP28.39■■■□□ 2.14
SPG7-214ENST00000566371 EIF4A1P60842 406 aaKnown RBP28.38■■■□□ 2.13
SPG7-214ENST00000566371 NPM2Q86SE8 214 aaKnown RBP28.38■■■□□ 2.13
SPG7-214ENST00000566371 PELP1Q8IZL8 1130 aaKnown RBP28.38■■■□□ 2.13
SPG7-214ENST00000566371 KIAA1551Q9HCM1 1747 aa28.38■■■□□ 2.13
SPG7-214ENST00000566371 POLRMTO00411 1230 aaKnown RBP28.37■■■□□ 2.13
SPG7-214ENST00000566371 YY1P25490 414 aa28.37■■■□□ 2.13
SPG7-214ENST00000566371 TGFB2P61812 414 aa28.37■■■□□ 2.13
SPG7-214ENST00000566371 ZNF330Q9Y3S2 320 aaPredicted RBP28.37■■■□□ 2.13
SPG7-214ENST00000566371 PXDNLA1KZ92 1463 aa28.37■■■□□ 2.13
SPG7-214ENST00000566371 ANP32CO43423 234 aa28.36■■■□□ 2.13
SPG7-214ENST00000566371 GIGYF1O75420 1035 aaPredicted RBP28.36■■■□□ 2.13
SPG7-214ENST00000566371 YBX3P16989 372 aaKnown RBP eCLIP28.36■■■□□ 2.13
SPG7-214ENST00000566371 NEUROD2Q15784 382 aa28.36■■■□□ 2.13
SPG7-214ENST00000566371 CHD4Q14839 1912 aa28.35■■■□□ 2.13
SPG7-214ENST00000566371 GRIN3BO60391 1043 aa28.35■■■□□ 2.13
SPG7-214ENST00000566371 NFIXQ14938 502 aa28.35■■■□□ 2.13
SPG7-214ENST00000566371 TSPYL4Q9UJ04 414 aa28.35■■■□□ 2.13
SPG7-214ENST00000566371 TRIM35Q9UPQ4 493 aa28.35■■■□□ 2.13
SPG7-214ENST00000566371 NRXN2Q9P2S2 1712 aa28.34■■■□□ 2.13
SPG7-214ENST00000566371 BCORQ6W2J9 1755 aa28.34■■■□□ 2.13
SPG7-214ENST00000566371 TBC1D2BQ9UPU7 963 aa28.33■■■□□ 2.13
SPG7-214ENST00000566371 NBPF26B4DH59 902 aa28.32■■■□□ 2.12
SPG7-214ENST00000566371 NBPF10Q6P3W6 841 aaKnown RBP28.32■■■□□ 2.12
SPG7-214ENST00000566371 NBPF15Q8N660 670 aa28.32■■■□□ 2.12
SPG7-214ENST00000566371 N4BP2Q86UW6 1770 aaPredicted RBP28.32■■■□□ 2.12
SPG7-214ENST00000566371 PIP4K2AP48426 406 aaPredicted RBP28.31■■■□□ 2.12
SPG7-214ENST00000566371 AFDNP55196 1824 aaKnown RBP28.31■■■□□ 2.12
SPG7-214ENST00000566371 CAMTA2O94983 1202 aa28.3■■■□□ 2.12
SPG7-214ENST00000566371 CCDC184Q52MB2 194 aa28.3■■■□□ 2.12
SPG7-214ENST00000566371 DZIP3Q86Y13 1208 aaKnown RBP28.3■■■□□ 2.12
SPG7-214ENST00000566371 CHL1O00533 1208 aa28.28■■■□□ 2.12
SPG7-214ENST00000566371 RGL2O15211 777 aa28.28■■■□□ 2.12
SPG7-214ENST00000566371 A0A0G2JLW4 131 aa28.27■■■□□ 2.12
SPG7-214ENST00000566371 APAF1O14727 1248 aa28.27■■■□□ 2.12
SPG7-214ENST00000566371 SERPINB2P05120 415 aa28.27■■■□□ 2.12
SPG7-214ENST00000566371 TBC1D9BQ66K14 1250 aa28.27■■■□□ 2.12
SPG7-214ENST00000566371 BRCA1P38398 1863 aaKnown RBP28.27■■■□□ 2.12
SPG7-214ENST00000566371 CARMIL3Q8ND23 1372 aa28.26■■■□□ 2.12
SPG7-214ENST00000566371 DPEP1P16444 411 aa28.26■■■□□ 2.11
SPG7-214ENST00000566371 CLEC4GQ6UXB4 293 aa28.26■■■□□ 2.11
SPG7-214ENST00000566371 ERBB4Q15303 1308 aa28.25■■■□□ 2.11
SPG7-214ENST00000566371 BICDL1Q6ZP65 573 aa28.25■■■□□ 2.11
SPG7-214ENST00000566371 MRS2Q9HD23 443 aa28.25■■■□□ 2.11
SPG7-214ENST00000566371 ZNF652Q9Y2D9 606 aa28.24■■■□□ 2.11
SPG7-214ENST00000566371 KCNA3P22001 575 aa28.22■■■□□ 2.11
SPG7-214ENST00000566371 CFAP44Q96MT7 982 aa28.22■■■□□ 2.11
SPG7-214ENST00000566371 SETDB2Q96T68 719 aa28.22■■■□□ 2.11
SPG7-214ENST00000566371 CALD1Q05682 793 aaKnown RBP28.21■■■□□ 2.11
SPG7-214ENST00000566371 WWC3Q9ULE0 1092 aa28.21■■■□□ 2.11
SPG7-214ENST00000566371 LAS1LQ9Y4W2 734 aaKnown RBP28.2■■■□□ 2.1
SPG7-214ENST00000566371 PIM2Q9P1W9 311 aa28.19■■■□□ 2.1
SPG7-214ENST00000566371 BCS1LQ9Y276 419 aa28.18■■■□□ 2.1
SPG7-214ENST00000566371 DLEC1Q9Y238 1755 aa28.18■■■□□ 2.1
SPG7-214ENST00000566371 ERVV-1B6SEH8 477 aa28.17■■■□□ 2.1
SPG7-214ENST00000566371 IFT57Q9NWB7 429 aa28.17■■■□□ 2.1
SPG7-214ENST00000566371 ARFGEF1Q9Y6D6 1849 aa28.17■■■□□ 2.1
SPG7-214ENST00000566371 ZNF853P0CG23 659 aa28.16■■■□□ 2.1
SPG7-214ENST00000566371 MYL6BP14649 208 aa28.16■■■□□ 2.1
SPG7-214ENST00000566371 CHRNA5P30532 468 aa28.16■■■□□ 2.1
SPG7-214ENST00000566371 PRR5LQ6MZQ0 368 aa28.16■■■□□ 2.1
SPG7-214ENST00000566371 KIF6Q6ZMV9 814 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms