RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 FRAT2O75474 233 aaPredicted RBP16.41■□□□□ 0.22
LINC00563-201ENST00000566370 KSR2Q6VAB6 950 aa16.41■□□□□ 0.22
LINC00563-201ENST00000566370 C16orf71Q8IYS4 520 aaPredicted RBP16.41■□□□□ 0.22
LINC00563-201ENST00000566370 TTC5Q8N0Z6 440 aa16.41■□□□□ 0.22
LINC00563-201ENST00000566370 PI4KAP1Q8N8J0 262 aa16.41■□□□□ 0.22
LINC00563-201ENST00000566370 CRYBG1Q9Y4K1 1723 aa16.4■□□□□ 0.22
LINC00563-201ENST00000566370 K7ELQ4 463 aaPredicted RBP16.4■□□□□ 0.22
LINC00563-201ENST00000566370 BEND3Q5T5X7 828 aa16.4■□□□□ 0.22
LINC00563-201ENST00000566370 ERC1Q8IUD2 1116 aa16.4■□□□□ 0.22
LINC00563-201ENST00000566370 KIF1BPQ96EK5 621 aa16.4■□□□□ 0.22
LINC00563-201ENST00000566370 DCAF5Q96JK2 942 aa16.4■□□□□ 0.22
LINC00563-201ENST00000566370 SLC52A2Q9HAB3 445 aa16.4■□□□□ 0.22
LINC00563-201ENST00000566370 DDX21Q9NR30 783 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC00563-201ENST00000566370 C9orf78Q9NZ63 289 aaPredicted RBP16.4■□□□□ 0.22
LINC00563-201ENST00000566370 PKD1L3Q7Z443 1732 aa16.39■□□□□ 0.22
LINC00563-201ENST00000566370 PARP4Q9UKK3 1724 aaKnown RBP16.39■□□□□ 0.22
LINC00563-201ENST00000566370 ST18O60284 1047 aa16.39■□□□□ 0.21
LINC00563-201ENST00000566370 PHKG2P15735 406 aa16.39■□□□□ 0.21
LINC00563-201ENST00000566370 NEXNQ0ZGT2 675 aa16.39■□□□□ 0.21
LINC00563-201ENST00000566370 STAP2Q9UGK3 403 aa16.39■□□□□ 0.21
LINC00563-201ENST00000566370 PNMA6EA0A0J9YXQ4 647 aa16.38■□□□□ 0.21
LINC00563-201ENST00000566370 OS9Q13438 667 aaPredicted RBP16.38■□□□□ 0.21
LINC00563-201ENST00000566370 POLA2Q14181 598 aa16.38■□□□□ 0.21
LINC00563-201ENST00000566370 PPP1R42Q7Z4L9 355 aa16.38■□□□□ 0.21
LINC00563-201ENST00000566370 GPATCH3Q96I76 525 aa16.38■□□□□ 0.21
LINC00563-201ENST00000566370 DDX11L8A8MPP1 907 aa16.37■□□□□ 0.21
LINC00563-201ENST00000566370 SRGAP3O43295 1099 aa16.37■□□□□ 0.21
LINC00563-201ENST00000566370 EPB41L2O43491 1005 aaKnown RBP16.37■□□□□ 0.21
LINC00563-201ENST00000566370 KCNQ3O43525 872 aa16.37■□□□□ 0.21
LINC00563-201ENST00000566370 SURF6O75683 361 aaKnown RBP16.37■□□□□ 0.21
LINC00563-201ENST00000566370 ZNF790Q6PG37 636 aa16.37■□□□□ 0.21
LINC00563-201ENST00000566370 LINS1Q8NG48 757 aa16.37■□□□□ 0.21
LINC00563-201ENST00000566370 MAP3K2Q9Y2U5 619 aa16.37■□□□□ 0.21
LINC00563-201ENST00000566370 MRC1P22897 1456 aa16.37■□□□□ 0.21
LINC00563-201ENST00000566370 LARP1Q6PKG0 1096 aaKnown RBP16.36■□□□□ 0.21
LINC00563-201ENST00000566370 OTUD7AQ8TE49 926 aaPredicted RBP16.36■□□□□ 0.21
LINC00563-201ENST00000566370 USP26Q9BXU7 913 aa16.36■□□□□ 0.21
LINC00563-201ENST00000566370 ADCY9O60503 1353 aa16.36■□□□□ 0.21
LINC00563-201ENST00000566370 TRIM6-TRIM34B2RNG4 842 aa16.36■□□□□ 0.21
LINC00563-201ENST00000566370 MTX1Q13505 466 aa16.36■□□□□ 0.21
LINC00563-201ENST00000566370 SPRYD3Q8NCJ5 442 aa16.36■□□□□ 0.21
LINC00563-201ENST00000566370 GBP4Q96PP9 640 aa16.36■□□□□ 0.21
LINC00563-201ENST00000566370 FMNL2Q96PY5 1086 aa16.36■□□□□ 0.21
LINC00563-201ENST00000566370 SALL3Q9BXA9 1300 aa16.35■□□□□ 0.21
LINC00563-201ENST00000566370 RHPN1Q8TCX5 695 aa16.35■□□□□ 0.21
LINC00563-201ENST00000566370 XIRP1Q702N8 1843 aaKnown RBP16.35■□□□□ 0.21
LINC00563-201ENST00000566370 MEGF6O75095 1541 aa16.35■□□□□ 0.21
LINC00563-201ENST00000566370 KDM6AO15550 1401 aaPredicted RBP16.34■□□□□ 0.21
LINC00563-201ENST00000566370 SNRPA1P09661 255 aaKnown RBP16.34■□□□□ 0.21
LINC00563-201ENST00000566370 HSPA2P54652 639 aa16.34■□□□□ 0.21
LINC00563-201ENST00000566370 CABP4P57796 275 aa16.34■□□□□ 0.21
LINC00563-201ENST00000566370 RIC3Q7Z5B4 369 aa16.34■□□□□ 0.21
LINC00563-201ENST00000566370 RILPL2Q969X0 211 aa16.34■□□□□ 0.21
LINC00563-201ENST00000566370 PRDM11Q9NQV5 511 aa16.34■□□□□ 0.21
LINC00563-201ENST00000566370 PCDH11XQ9BZA7 1347 aa16.33■□□□□ 0.21
LINC00563-201ENST00000566370 PCDH11YQ9BZA8 1340 aa16.33■□□□□ 0.21
LINC00563-201ENST00000566370 MCM2P49736 904 aa16.33■□□□□ 0.2
LINC00563-201ENST00000566370 BRINP3Q76B58 766 aa16.33■□□□□ 0.2
LINC00563-201ENST00000566370 CNTROBQ8N137 903 aa16.33■□□□□ 0.2
LINC00563-201ENST00000566370 TTC41PQ6P2S7 1318 aa16.32■□□□□ 0.2
LINC00563-201ENST00000566370 TUBGCP6Q96RT7 1819 aa16.32■□□□□ 0.2
LINC00563-201ENST00000566370 AK9Q5TCS8 1911 aa16.32■□□□□ 0.2
LINC00563-201ENST00000566370 GOLGA6L22H0YM25 854 aa16.32■□□□□ 0.2
LINC00563-201ENST00000566370 CLASRPQ8N2M8 674 aaKnown RBP16.32■□□□□ 0.2
LINC00563-201ENST00000566370 KIF2CQ99661 725 aa16.32■□□□□ 0.2
LINC00563-201ENST00000566370 LAMB4A4D0S4 1761 aa16.32■□□□□ 0.2
LINC00563-201ENST00000566370 ERBB4Q15303 1308 aa16.32■□□□□ 0.2
LINC00563-201ENST00000566370 WDR17Q8IZU2 1322 aa16.32■□□□□ 0.2
LINC00563-201ENST00000566370 GRM8O00222 908 aa16.31■□□□□ 0.2
LINC00563-201ENST00000566370 NBPF7P0C2Y1 421 aaPredicted RBP16.31■□□□□ 0.2
LINC00563-201ENST00000566370 MCM4P33991 863 aa16.31■□□□□ 0.2
LINC00563-201ENST00000566370 ANAPC15P60006 121 aa16.31■□□□□ 0.2
LINC00563-201ENST00000566370 CHRNA2Q15822 529 aa16.31■□□□□ 0.2
LINC00563-201ENST00000566370 CABLES1Q8TDN4 633 aa16.31■□□□□ 0.2
LINC00563-201ENST00000566370 DDX17Q92841 729 aaKnown RBP16.31■□□□□ 0.2
LINC00563-201ENST00000566370 ESYT1Q9BSJ8 1104 aa16.31■□□□□ 0.2
LINC00563-201ENST00000566370 C5P01031 1676 aa16.3■□□□□ 0.2
LINC00563-201ENST00000566370 ANXA1P04083 346 aa16.3■□□□□ 0.2
LINC00563-201ENST00000566370 TOM1L2Q6ZVM7 507 aa16.3■□□□□ 0.2
LINC00563-201ENST00000566370 NFATC2IPQ8NCF5 419 aa16.3■□□□□ 0.2
LINC00563-201ENST00000566370 CWC22Q9HCG8 908 aaKnown RBP16.3■□□□□ 0.2
LINC00563-201ENST00000566370 SLAIN2Q9P270 581 aa16.3■□□□□ 0.2
LINC00563-201ENST00000566370 UTYO14607 1347 aa16.3■□□□□ 0.2
LINC00563-201ENST00000566370 SOS2Q07890 1332 aaPredicted RBP16.3■□□□□ 0.2
LINC00563-201ENST00000566370 GLRX3O76003 335 aaKnown RBP16.29■□□□□ 0.2
LINC00563-201ENST00000566370 RUFY2Q8WXA3 655 aa16.29■□□□□ 0.2
LINC00563-201ENST00000566370 IL1RAPL2Q9NP60 686 aa16.29■□□□□ 0.2
LINC00563-201ENST00000566370 STRCQ7RTU9 1775 aa16.29■□□□□ 0.2
LINC00563-201ENST00000566370 IFIT2P09913 472 aaKnown RBP16.28■□□□□ 0.2
LINC00563-201ENST00000566370 CHMLP26374 656 aa16.28■□□□□ 0.2
LINC00563-201ENST00000566370 NUCB2P80303 420 aa16.28■□□□□ 0.2
LINC00563-201ENST00000566370 AIMP1Q12904 312 aaKnown RBP16.28■□□□□ 0.2
LINC00563-201ENST00000566370 G3BP1Q13283 466 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC00563-201ENST00000566370 SKOR2Q2VWA4 1001 aaPredicted RBP16.28■□□□□ 0.2
LINC00563-201ENST00000566370 ZCRB1Q8TBF4 217 aaKnown RBP16.28■□□□□ 0.2
LINC00563-201ENST00000566370 USP42Q9H9J4 1324 aaKnown RBP16.28■□□□□ 0.2
LINC00563-201ENST00000566370 ERVV-2B6SEH9 535 aa16.28■□□□□ 0.2
LINC00563-201ENST00000566370 L1TD1Q5T7N2 865 aaKnown RBP16.28■□□□□ 0.2
LINC00563-201ENST00000566370 KIAA1211Q6ZU35 1233 aa16.28■□□□□ 0.2
LINC00563-201ENST00000566370 ANO2Q9NQ90 1003 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms