RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 NEK4P51957 841 aa12.33□□□□□ -0.44
SNX29-205ENST00000566228 RNF187Q5TA31 235 aaPredicted RBP12.33□□□□□ -0.44
SNX29-205ENST00000566228 AKAP2Q9Y2D5 859 aa12.33□□□□□ -0.44
SNX29-205ENST00000566228 MACROD2A1Z1Q3 448 aa12.32□□□□□ -0.44
SNX29-205ENST00000566228 HLTFQ14527 1009 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNX29-205ENST00000566228 SMARCA4P51532 1647 aa12.32□□□□□ -0.44
SNX29-205ENST00000566228 BLOC1S2Q6QNY1 142 aa12.32□□□□□ -0.44
SNX29-205ENST00000566228 ANO10Q9NW15 660 aa12.32□□□□□ -0.44
SNX29-205ENST00000566228 FIBPO43427 364 aa12.32□□□□□ -0.44
SNX29-205ENST00000566228 MXRA7P84157 204 aa12.32□□□□□ -0.44
SNX29-205ENST00000566228 LARP1BQ659C4 914 aaKnown RBP12.32□□□□□ -0.44
SNX29-205ENST00000566228 CCDC160A6NGH7 325 aa12.32□□□□□ -0.44
SNX29-205ENST00000566228 CCDC94Q9BW85 323 aaPredicted RBP12.32□□□□□ -0.44
SNX29-205ENST00000566228 SPC24Q8NBT2 197 aa12.31□□□□□ -0.44
SNX29-205ENST00000566228 CWC25Q9NXE8 425 aaPredicted RBP12.31□□□□□ -0.44
SNX29-205ENST00000566228 MAP3K11Q16584 847 aa12.31□□□□□ -0.44
SNX29-205ENST00000566228 GON4LQ3T8J9 2241 aa12.31□□□□□ -0.44
SNX29-205ENST00000566228 SYNCQ9H7C4 482 aa12.31□□□□□ -0.44
SNX29-205ENST00000566228 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
SNX29-205ENST00000566228 ELL2O00472 640 aaPredicted RBP12.31□□□□□ -0.44
SNX29-205ENST00000566228 SURF6O75683 361 aaKnown RBP12.31□□□□□ -0.44
SNX29-205ENST00000566228 VCX3BQ9H321 246 aa12.31□□□□□ -0.44
SNX29-205ENST00000566228 RSPH3Q86UC2 560 aa12.31□□□□□ -0.44
SNX29-205ENST00000566228 FAM177A1Q8N128 213 aaPredicted RBP12.31□□□□□ -0.44
SNX29-205ENST00000566228 HSF2BPO75031 334 aa12.3□□□□□ -0.44
SNX29-205ENST00000566228 TUBBP07437 444 aa12.3□□□□□ -0.44
SNX29-205ENST00000566228 CALML4Q96GE6 196 aa12.3□□□□□ -0.44
SNX29-205ENST00000566228 IGHMBP2P38935 993 aaKnown RBP12.3□□□□□ -0.44
SNX29-205ENST00000566228 RNF214Q8ND24 703 aa12.3□□□□□ -0.44
SNX29-205ENST00000566228 TRAK1Q9UPV9 953 aa12.3□□□□□ -0.44
SNX29-205ENST00000566228 VCXQ9H320 206 aa12.3□□□□□ -0.44
SNX29-205ENST00000566228 RNF41Q9H4P4 317 aaPredicted RBP12.3□□□□□ -0.44
SNX29-205ENST00000566228 STRN4Q9NRL3 753 aa12.3□□□□□ -0.44
SNX29-205ENST00000566228 JPH4Q96JJ6 628 aa12.3□□□□□ -0.44
SNX29-205ENST00000566228 IQCA1Q86XH1 822 aa12.29□□□□□ -0.44
SNX29-205ENST00000566228 UQCRHLA0A096LP55 91 aa12.29□□□□□ -0.44
SNX29-205ENST00000566228 NUP133Q8WUM0 1156 aa12.29□□□□□ -0.44
SNX29-205ENST00000566228 CCT6BQ92526 530 aa12.29□□□□□ -0.44
SNX29-205ENST00000566228 PSMD1Q99460 953 aa12.29□□□□□ -0.44
SNX29-205ENST00000566228 CPSF2Q9P2I0 782 aaKnown RBP12.29□□□□□ -0.44
SNX29-205ENST00000566228 PPP1R1BQ9UD71 204 aaPredicted RBP12.29□□□□□ -0.44
SNX29-205ENST00000566228 CADPSQ9ULU8 1353 aa12.29□□□□□ -0.44
SNX29-205ENST00000566228 GIPC1O14908 333 aa12.29□□□□□ -0.44
SNX29-205ENST00000566228 SCAND2PQ9GZW5 306 aaPredicted RBP12.29□□□□□ -0.44
SNX29-205ENST00000566228 TOP1P11387 765 aaKnown RBP12.29□□□□□ -0.44
SNX29-205ENST00000566228 MVPQ14764 893 aaKnown RBP12.29□□□□□ -0.44
SNX29-205ENST00000566228 MIPOL1Q8TD10 442 aa12.29□□□□□ -0.44
SNX29-205ENST00000566228 TBC1D31Q96DN5 1066 aa12.29□□□□□ -0.44
SNX29-205ENST00000566228 SPC25Q9HBM1 224 aa12.29□□□□□ -0.44
SNX29-205ENST00000566228 TCP11L1Q9NUJ3 509 aa12.29□□□□□ -0.44
SNX29-205ENST00000566228 CRACR2BQ8N4Y2 399 aaPredicted RBP12.28□□□□□ -0.44
SNX29-205ENST00000566228 IMPG2Q9BZV3 1241 aa12.28□□□□□ -0.44
SNX29-205ENST00000566228 CEP120Q8N960 986 aa12.28□□□□□ -0.44
SNX29-205ENST00000566228 A6NNZ2 444 aa12.28□□□□□ -0.44
SNX29-205ENST00000566228 TATP17735 454 aaPredicted RBP12.28□□□□□ -0.44
SNX29-205ENST00000566228 KIF5BP33176 963 aa12.28□□□□□ -0.44
SNX29-205ENST00000566228 TUBB8Q3ZCM7 444 aa12.28□□□□□ -0.44
SNX29-205ENST00000566228 CTCFLQ8NI51 663 aaPredicted RBP12.28□□□□□ -0.44
SNX29-205ENST00000566228 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNX29-205ENST00000566228 NLRP2Q9NX02 1062 aa12.28□□□□□ -0.44
SNX29-205ENST00000566228 TUBB4AP04350 444 aa12.28□□□□□ -0.44
SNX29-205ENST00000566228 CASQ2O14958 399 aaPredicted RBP12.28□□□□□ -0.44
SNX29-205ENST00000566228 ATP5DP30049 168 aa12.28□□□□□ -0.44
SNX29-205ENST00000566228 TAOK1Q7L7X3 1001 aa12.28□□□□□ -0.44
SNX29-205ENST00000566228 LNPKQ9C0E8 428 aa12.28□□□□□ -0.44
SNX29-205ENST00000566228 VPS8Q8N3P4 1428 aa12.28□□□□□ -0.44
SNX29-205ENST00000566228 USP5P45974 858 aa12.27□□□□□ -0.44
SNX29-205ENST00000566228 CAVIN4Q5BKX8 364 aa12.27□□□□□ -0.44
SNX29-205ENST00000566228 ZNF428Q96B54 188 aa12.27□□□□□ -0.44
SNX29-205ENST00000566228 TRIM7Q9C029 511 aa12.27□□□□□ -0.44
SNX29-205ENST00000566228 LRP2BPQ9P2M1 347 aa12.27□□□□□ -0.44
SNX29-205ENST00000566228 LUC7L2Q9Y383 392 aaKnown RBP12.27□□□□□ -0.44
SNX29-205ENST00000566228 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.44
SNX29-205ENST00000566228 PANK3Q9H999 370 aa12.27□□□□□ -0.44
SNX29-205ENST00000566228 BCAP29Q9UHQ4 241 aa12.27□□□□□ -0.44
SNX29-205ENST00000566228 TTC36A6NLP5 189 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 SRGAP1Q7Z6B7 1085 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 LMBR1Q8WVP7 490 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 HAUS8Q9BT25 410 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 RRP7AQ9Y3A4 280 aaKnown RBP12.27□□□□□ -0.45
SNX29-205ENST00000566228 NUTM2FA1L443 756 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 ZBTB24O43167 697 aaPredicted RBP12.27□□□□□ -0.45
SNX29-205ENST00000566228 UQCRHP07919 91 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 SARNPP82979 210 aaKnown RBP12.27□□□□□ -0.45
SNX29-205ENST00000566228 ERMNQ8TAM6 284 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 NUF2Q9BZD4 464 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 MNAT1P51948 309 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 CRBNQ96SW2 442 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 NUP88Q99567 741 aaPredicted RBP12.27□□□□□ -0.45
SNX29-205ENST00000566228 CCDC144CPQ8IYA2 1237 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 SPG7Q9UQ90 795 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 PRPF40AO75400 957 aaKnown RBP12.27□□□□□ -0.45
SNX29-205ENST00000566228 CFAP157Q5JU67 520 aa12.27□□□□□ -0.45
SNX29-205ENST00000566228 HNRNPMP52272 730 aaKnown RBP eCLIP12.26□□□□□ -0.456e-7■■■■■ 55.8
SNX29-205ENST00000566228 MSL1Q68DK7 614 aa12.26□□□□□ -0.45
SNX29-205ENST00000566228 SYCP3Q8IZU3 236 aa12.26□□□□□ -0.45
SNX29-205ENST00000566228 OTUD6BQ8N6M0 293 aa12.26□□□□□ -0.45
SNX29-205ENST00000566228 GBP7Q8N8V2 638 aaPredicted RBP12.26□□□□□ -0.45
SNX29-205ENST00000566228 EPSTI1Q96J88 318 aa12.26□□□□□ -0.45
SNX29-205ENST00000566228 HVCN1Q96D96 273 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms