RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 NSD2O96028 1365 aa8.85□□□□□ -0.99
TCF4-229ENST00000565580 INSRP06213 1382 aa8.85□□□□□ -0.99
TCF4-229ENST00000565580 FLT4P35916 1363 aa8.85□□□□□ -0.99
TCF4-229ENST00000565580 TK2O00142 265 aa8.84□□□□□ -0.99
TCF4-229ENST00000565580 PRIM1P49642 420 aaKnown RBP8.84□□□□□ -0.99
TCF4-229ENST00000565580 KCNQ4P56696 695 aa8.84□□□□□ -0.99
TCF4-229ENST00000565580 HS6ST3Q8IZP7 471 aa8.84□□□□□ -0.99
TCF4-229ENST00000565580 SYTL4Q96C24 671 aaPredicted RBP8.84□□□□□ -0.99
TCF4-229ENST00000565580 POLR3GLQ9BT43 218 aa8.84□□□□□ -0.99
TCF4-229ENST00000565580 GPHNQ9NQX3 736 aaPredicted RBP8.84□□□□□ -0.99
TCF4-229ENST00000565580 RYDENQ9NUL5 291 aaKnown RBP8.84□□□□□ -0.99
TCF4-229ENST00000565580 SMG6Q86US8 1419 aaKnown RBP8.83□□□□□ -1
TCF4-229ENST00000565580 HSPA5P11021 654 aaKnown RBP8.83□□□□□ -1
TCF4-229ENST00000565580 PPP4R3BQ5MIZ7 849 aa8.83□□□□□ -1
TCF4-229ENST00000565580 ADGRD1Q6QNK2 874 aa8.83□□□□□ -1
TCF4-229ENST00000565580 POTEEQ6S8J3 1075 aa8.83□□□□□ -1
TCF4-229ENST00000565580 KIF24Q5T7B8 1368 aa8.83□□□□□ -1
TCF4-229ENST00000565580 PPM1GO15355 546 aaPredicted RBP8.82□□□□□ -1
TCF4-229ENST00000565580 TATP17735 454 aaPredicted RBP8.82□□□□□ -1
TCF4-229ENST00000565580 PLPP6Q8IY26 295 aa8.82□□□□□ -1
TCF4-229ENST00000565580 CCER1Q8TC90 406 aaPredicted RBP8.82□□□□□ -1
TCF4-229ENST00000565580 RAPGEF4Q8WZA2 1011 aa8.82□□□□□ -1
TCF4-229ENST00000565580 CGNL1Q0VF96 1302 aa8.81□□□□□ -1
TCF4-229ENST00000565580 ANKRD26Q9UPS8 1709 aa8.81□□□□□ -1
TCF4-229ENST00000565580 CYP27B1O15528 508 aa8.81□□□□□ -1
TCF4-229ENST00000565580 EIF4G2P78344 907 aaKnown RBP eCLIP8.81□□□□□ -12e-7■■■■■ 31.9
TCF4-229ENST00000565580 SLC27A3Q5K4L6 730 aa8.81□□□□□ -1
TCF4-229ENST00000565580 MTFR1LQ9H019 292 aa8.81□□□□□ -1
TCF4-229ENST00000565580 NCAPD2Q15021 1401 aa8.8□□□□□ -1
TCF4-229ENST00000565580 LY75O60449 1722 aa8.8□□□□□ -1
TCF4-229ENST00000565580 FHDC1Q9C0D6 1143 aaPredicted RBP8.8□□□□□ -1
TCF4-229ENST00000565580 POLKQ9UBT6 870 aa8.8□□□□□ -1
TCF4-229ENST00000565580 MAP2P11137 1827 aaKnown RBP8.8□□□□□ -1
TCF4-229ENST00000565580 TUBGCP6Q96RT7 1819 aa8.8□□□□□ -1
TCF4-229ENST00000565580 WASHC2AQ641Q2 1341 aa8.8□□□□□ -1
TCF4-229ENST00000565580 PNPLA7Q6ZV29 1317 aa8.8□□□□□ -1
TCF4-229ENST00000565580 PCDH11XQ9BZA7 1347 aa8.8□□□□□ -1
TCF4-229ENST00000565580 PCDH11YQ9BZA8 1340 aa8.8□□□□□ -1
TCF4-229ENST00000565580 TNNT2P45379 298 aaPredicted RBP8.79□□□□□ -1
TCF4-229ENST00000565580 EYA1Q99502 592 aa8.79□□□□□ -1
TCF4-229ENST00000565580 PANK3Q9H999 370 aa8.79□□□□□ -1
TCF4-229ENST00000565580 CCNL1Q9UK58 526 aaPredicted RBP8.79□□□□□ -1
TCF4-229ENST00000565580 PKD1L3Q7Z443 1732 aa8.79□□□□□ -1
TCF4-229ENST00000565580 TOGARAM1Q9Y4F4 1720 aa8.79□□□□□ -1
TCF4-229ENST00000565580 QSER1Q2KHR3 1735 aa8.78□□□□□ -1
TCF4-229ENST00000565580 EIF4A2Q14240 407 aaKnown RBP8.78□□□□□ -1
TCF4-229ENST00000565580 ARXQ96QS3 562 aa8.78□□□□□ -1
TCF4-229ENST00000565580 SYT17Q9BSW7 474 aa8.78□□□□□ -1
TCF4-229ENST00000565580 TFCP2L1Q9NZI6 479 aa8.78□□□□□ -1
TCF4-229ENST00000565580 PLA2G2EQ9NZK7 142 aa8.78□□□□□ -1
TCF4-229ENST00000565580 YY1P25490 414 aa8.77□□□□□ -1.01
TCF4-229ENST00000565580 MPRIPQ6WCQ1 1025 aa8.77□□□□□ -1.01
TCF4-229ENST00000565580 PALLDQ8WX93 1383 aa8.76□□□□□ -1.01
TCF4-229ENST00000565580 ITGB4P16144 1822 aa8.76□□□□□ -1.01
TCF4-229ENST00000565580 NKX1-1Q15270 411 aaPredicted RBP8.76□□□□□ -1.01
TCF4-229ENST00000565580 SLC16A10Q8TF71 515 aa8.76□□□□□ -1.01
TCF4-229ENST00000565580 COL24A1Q17RW2 1714 aa8.76□□□□□ -1.01
TCF4-229ENST00000565580 DSG2Q14126 1118 aa8.75□□□□□ -1.01
TCF4-229ENST00000565580 COL23A1Q86Y22 540 aaPredicted RBP8.75□□□□□ -1.01
TCF4-229ENST00000565580 PIGBQ92521 554 aa8.75□□□□□ -1.01
TCF4-229ENST00000565580 SPG7Q9UQ90 795 aa8.75□□□□□ -1.01
TCF4-229ENST00000565580 IGSF1Q8N6C5 1336 aa8.75□□□□□ -1.01
TCF4-229ENST00000565580 C5P01031 1676 aa8.75□□□□□ -1.01
TCF4-229ENST00000565580 MAP3K5Q99683 1374 aa8.74□□□□□ -1.01
TCF4-229ENST00000565580 HRO43593 1189 aa8.74□□□□□ -1.01
TCF4-229ENST00000565580 PHKG2P15735 406 aa8.74□□□□□ -1.01
TCF4-229ENST00000565580 SMIM5Q71RC9 77 aa8.74□□□□□ -1.01
TCF4-229ENST00000565580 AMIGO3Q86WK7 504 aa8.74□□□□□ -1.01
TCF4-229ENST00000565580 TAF1LQ8IZX4 1826 aa8.74□□□□□ -1.01
TCF4-229ENST00000565580 POLD1P28340 1107 aa8.73□□□□□ -1.01
TCF4-229ENST00000565580 MSL1Q68DK7 614 aa8.73□□□□□ -1.01
TCF4-229ENST00000565580 MORC1Q86VD1 984 aa8.73□□□□□ -1.01
TCF4-229ENST00000565580 IFNL2Q8IZJ0 200 aa8.73□□□□□ -1.01
TCF4-229ENST00000565580 KIF7Q2M1P5 1343 aa8.73□□□□□ -1.01
TCF4-229ENST00000565580 UTRNP46939 3433 aa8.73□□□□□ -1.01
TCF4-229ENST00000565580 C4BP0C0L5 1744 aa8.72□□□□□ -1.01
TCF4-229ENST00000565580 PSEN2P49810 448 aa8.72□□□□□ -1.01
TCF4-229ENST00000565580 DMRTA1Q5VZB9 504 aa8.72□□□□□ -1.01
TCF4-229ENST00000565580 AEBP1Q8IUX7 1158 aa8.72□□□□□ -1.01
TCF4-229ENST00000565580 NLGN2Q8NFZ4 835 aa8.72□□□□□ -1.01
TCF4-229ENST00000565580 SMARCC1Q92922 1105 aaPredicted RBP8.72□□□□□ -1.01
TCF4-229ENST00000565580 TMOD3Q9NYL9 352 aa8.72□□□□□ -1.01
TCF4-229ENST00000565580 ASAP1Q9ULH1 1129 aa8.72□□□□□ -1.01
TCF4-229ENST00000565580 LOC102724428A0A0B4J2F2 783 aa8.71□□□□□ -1.02
TCF4-229ENST00000565580 SIK1P57059 783 aa8.71□□□□□ -1.02
TCF4-229ENST00000565580 ITPK1Q13572 414 aa8.71□□□□□ -1.02
TCF4-229ENST00000565580 LINC00116Q8NCU8 138 aa8.71□□□□□ -1.02
TCF4-229ENST00000565580 ATG3Q9NT62 314 aa8.71□□□□□ -1.02
TCF4-229ENST00000565580 KNSTRNQ9Y448 316 aa8.71□□□□□ -1.02
TCF4-229ENST00000565580 KDM6AO15550 1401 aaPredicted RBP8.71□□□□□ -1.02
TCF4-229ENST00000565580 PHF14O94880 888 aa8.7□□□□□ -1.02
TCF4-229ENST00000565580 OXER1Q8TDS5 423 aa8.7□□□□□ -1.02
TCF4-229ENST00000565580 AK7Q96M32 723 aa8.7□□□□□ -1.02
TCF4-229ENST00000565580 PLEKHG2Q9H7P9 1386 aa8.7□□□□□ -1.02
TCF4-229ENST00000565580 UBR3Q6ZT12 1888 aa8.7□□□□□ -1.02
TCF4-229ENST00000565580 GOLGB1Q14789 3259 aaKnown RBP8.69□□□□□ -1.02
TCF4-229ENST00000565580 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.69□□□□□ -1.02
TCF4-229ENST00000565580 PER1O15534 1290 aaPredicted RBP8.69□□□□□ -1.02
TCF4-229ENST00000565580 IL13P35225 146 aa8.69□□□□□ -1.02
TCF4-229ENST00000565580 GPR162Q16538 588 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms