RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 NLRP8Q86W28 1048 aa9.2□□□□□ -0.94
CHD9-215ENST00000565442 ATXN7O15265 892 aaPredicted RBP9.19□□□□□ -0.94
CHD9-215ENST00000565442 ATP4AP20648 1035 aa9.19□□□□□ -0.94
CHD9-215ENST00000565442 GATA4P43694 442 aa9.19□□□□□ -0.94
CHD9-215ENST00000565442 FCHSD1Q86WN1 690 aa9.19□□□□□ -0.94
CHD9-215ENST00000565442 C1orf216Q8TAB5 229 aa9.19□□□□□ -0.94
CHD9-215ENST00000565442 AVENQ9NQS1 362 aaPredicted RBP9.19□□□□□ -0.94
CHD9-215ENST00000565442 KLF15Q9UIH9 416 aa9.19□□□□□ -0.94
CHD9-215ENST00000565442 FAM182BQ5T319 152 aa9.18□□□□□ -0.94
CHD9-215ENST00000565442 TRIM11Q96F44 468 aa9.18□□□□□ -0.94
CHD9-215ENST00000565442 DCDC2BA2VCK2 349 aa9.17□□□□□ -0.94
CHD9-215ENST00000565442 SPATA31C1P0DKV0 1188 aa9.17□□□□□ -0.94
CHD9-215ENST00000565442 CD33P20138 364 aa9.17□□□□□ -0.94
CHD9-215ENST00000565442 USP4Q13107 963 aa9.17□□□□□ -0.94
CHD9-215ENST00000565442 MTMR14Q8NCE2 650 aa9.17□□□□□ -0.94
CHD9-215ENST00000565442 HCN2Q9UL51 889 aa9.17□□□□□ -0.94
CHD9-215ENST00000565442 DOLKQ9UPQ8 538 aa9.17□□□□□ -0.94
CHD9-215ENST00000565442 MAPTP10636 758 aaKnown RBP9.16□□□□□ -0.94
CHD9-215ENST00000565442 TNP2Q05952 138 aa9.16□□□□□ -0.94
CHD9-215ENST00000565442 BANK1Q8NDB2 785 aa9.16□□□□□ -0.94
CHD9-215ENST00000565442 PLVAPQ9BX97 442 aa9.16□□□□□ -0.94
CHD9-215ENST00000565442 APBB1O00213 710 aa9.14□□□□□ -0.95
CHD9-215ENST00000565442 KHNYNO15037 678 aaKnown RBP9.14□□□□□ -0.95
CHD9-215ENST00000565442 RSPO4Q2I0M5 234 aaPredicted RBP9.14□□□□□ -0.95
CHD9-215ENST00000565442 TSGA10IPQ3SY00 556 aa9.14□□□□□ -0.95
CHD9-215ENST00000565442 AIDAQ96BJ3 306 aa9.14□□□□□ -0.95
CHD9-215ENST00000565442 NIFKQ9BYG3 293 aaKnown RBP9.14□□□□□ -0.95
CHD9-215ENST00000565442 A0A1W2PNR3 127 aa9.13□□□□□ -0.95
CHD9-215ENST00000565442 ZNF468Q5VIY5 522 aaPredicted RBP9.13□□□□□ -0.95
CHD9-215ENST00000565442 C14orf37Q86TY3 774 aa9.13□□□□□ -0.95
CHD9-215ENST00000565442 SCO2A0A1W2PP80 73 aa9.12□□□□□ -0.95
CHD9-215ENST00000565442 INHAP05111 366 aa9.12□□□□□ -0.95
CHD9-215ENST00000565442 SCNN1DP51172 638 aa9.12□□□□□ -0.95
CHD9-215ENST00000565442 PCBP4P57723 403 aaKnown RBP9.12□□□□□ -0.95
CHD9-215ENST00000565442 OXLD1Q5BKU9 147 aa9.12□□□□□ -0.95
CHD9-215ENST00000565442 ARSJQ5FYB0 599 aaPredicted RBP9.12□□□□□ -0.95
CHD9-215ENST00000565442 PHTF2Q8N3S3 785 aa9.12□□□□□ -0.95
CHD9-215ENST00000565442 SIRT1Q96EB6 747 aa9.12□□□□□ -0.95
CHD9-215ENST00000565442 FAM157BP0CG42 384 aa9.11□□□□□ -0.95
CHD9-215ENST00000565442 GDF10P55107 478 aa9.11□□□□□ -0.95
CHD9-215ENST00000565442 NBPF1Q3BBV0 1214 aa9.11□□□□□ -0.95
CHD9-215ENST00000565442 FOXD4L6Q3SYB3 417 aaPredicted RBP9.11□□□□□ -0.95
CHD9-215ENST00000565442 SLFNL1Q499Z3 407 aa9.11□□□□□ -0.95
CHD9-215ENST00000565442 NKAPLQ5M9Q1 402 aa9.11□□□□□ -0.95
CHD9-215ENST00000565442 FOXD4L3Q6VB84 417 aaPredicted RBP9.11□□□□□ -0.95
CHD9-215ENST00000565442 PRR12Q9ULL5 1215 aa9.11□□□□□ -0.95
CHD9-215ENST00000565442 KRTAP1-3Q8IUG1 177 aa9.1□□□□□ -0.95
CHD9-215ENST00000565442 SPDYE3A6NKU9 549 aa9.09□□□□□ -0.95
CHD9-215ENST00000565442 SMTNP53814 917 aa9.09□□□□□ -0.95
CHD9-215ENST00000565442 EIF4G2P78344 907 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHD9-215ENST00000565442 ERICH6Q7L0X2 663 aa9.09□□□□□ -0.95
CHD9-215ENST00000565442 SNRKQ9NRH2 765 aa9.09□□□□□ -0.95
CHD9-215ENST00000565442 TPSG1Q9NRR2 321 aa9.09□□□□□ -0.95
CHD9-215ENST00000565442 ELOA3CA0A087WX78 387 aaPredicted RBP9.08□□□□□ -0.96
CHD9-215ENST00000565442 ELOA3DA6NLF2 546 aaPredicted RBP9.08□□□□□ -0.96
CHD9-215ENST00000565442 TATP17735 454 aaPredicted RBP9.08□□□□□ -0.96
CHD9-215ENST00000565442 ELOA3BQ3SY89 546 aa9.08□□□□□ -0.96
CHD9-215ENST00000565442 PRRT3Q5FWE3 981 aa9.08□□□□□ -0.96
CHD9-215ENST00000565442 ELOA3Q8NG57 546 aa9.08□□□□□ -0.96
CHD9-215ENST00000565442 ZDHHC3Q9NYG2 299 aa9.08□□□□□ -0.96
CHD9-215ENST00000565442 CHIC2Q9UKJ5 165 aa9.08□□□□□ -0.96
CHD9-215ENST00000565442 ZNF295-AS1Q8N0V1 137 aa9.07□□□□□ -0.96
CHD9-215ENST00000565442 ZIC5Q96T25 663 aa9.07□□□□□ -0.96
CHD9-215ENST00000565442 MARK1Q9P0L2 795 aa9.07□□□□□ -0.96
CHD9-215ENST00000565442 GJA3Q9Y6H8 435 aa9.07□□□□□ -0.96
CHD9-215ENST00000565442 DYRK3O43781 588 aa9.06□□□□□ -0.96
CHD9-215ENST00000565442 APBA3O96018 575 aa9.06□□□□□ -0.96
CHD9-215ENST00000565442 ALAS2P22557 587 aa9.06□□□□□ -0.96
CHD9-215ENST00000565442 SAMD5Q5TGI4 173 aa9.06□□□□□ -0.96
CHD9-215ENST00000565442 STRN4Q9NRL3 753 aa9.06□□□□□ -0.96
CHD9-215ENST00000565442 EFSO43281 561 aa9.05□□□□□ -0.96
CHD9-215ENST00000565442 LAMC2Q13753 1193 aa9.05□□□□□ -0.96
CHD9-215ENST00000565442 ARTNQ5T4W7 220 aa9.05□□□□□ -0.96
CHD9-215ENST00000565442 ZFP64Q9NPA5 681 aa9.05□□□□□ -0.96
CHD9-215ENST00000565442 SYT9Q86SS6 491 aa9.04□□□□□ -0.96
CHD9-215ENST00000565442 MDFIQ99750 246 aa9.04□□□□□ -0.96
CHD9-215ENST00000565442 SERTAD1Q9UHV2 236 aa9.04□□□□□ -0.96
CHD9-215ENST00000565442 IQSEC3Q9UPP2 1182 aaPredicted RBP9.04□□□□□ -0.96
CHD9-215ENST00000565442 CDK2AP1O14519 115 aa9.03□□□□□ -0.96
CHD9-215ENST00000565442 MTFR1Q15390 333 aa9.03□□□□□ -0.96
CHD9-215ENST00000565442 CABP1Q9NZU7 370 aa9.03□□□□□ -0.96
CHD9-215ENST00000565442 TBC1D2BQ9UPU7 963 aa9.03□□□□□ -0.96
CHD9-215ENST00000565442 A6NJY4 79 aa9.02□□□□□ -0.97
CHD9-215ENST00000565442 BICDL1Q6ZP65 573 aa9.02□□□□□ -0.97
CHD9-215ENST00000565442 SLC4A9Q96Q91 983 aa9.02□□□□□ -0.97
CHD9-215ENST00000565442 KRTAP4-12Q9BQ66 201 aa9.02□□□□□ -0.97
CHD9-215ENST00000565442 USP3Q9Y6I4 520 aa9.02□□□□□ -0.97
CHD9-215ENST00000565442 TMEM229AB2RXF0 380 aa9.01□□□□□ -0.97
CHD9-215ENST00000565442 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
CHD9-215ENST00000565442 LCE3BQ5TA77 95 aa9.01□□□□□ -0.97
CHD9-215ENST00000565442 NACC1Q96RE7 527 aa9.01□□□□□ -0.97
CHD9-215ENST00000565442 M0R082 166 aa9□□□□□ -0.97
CHD9-215ENST00000565442 SIN3BO75182 1162 aa9□□□□□ -0.97
CHD9-215ENST00000565442 COL9A3Q14050 684 aaPredicted RBP9□□□□□ -0.97
CHD9-215ENST00000565442 MAP7D1Q3KQU3 841 aa9□□□□□ -0.97
CHD9-215ENST00000565442 PRSS36Q5K4E3 855 aa9□□□□□ -0.97
CHD9-215ENST00000565442 ZNF417Q8TAU3 575 aa9□□□□□ -0.97
CHD9-215ENST00000565442 ZNF587Q96SQ5 575 aaPredicted RBP9□□□□□ -0.97
CHD9-215ENST00000565442 ADARB2-AS1A8MUL3 147 aa8.99□□□□□ -0.97
CHD9-215ENST00000565442 IRF5Q13568 498 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms