RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 A0A0G2JLW4 131 aa13.39□□□□□ -0.27
CMTM3-209ENST00000565003 KCNQ3O43525 872 aa13.39□□□□□ -0.27
CMTM3-209ENST00000565003 CANXP27824 592 aaKnown RBP13.39□□□□□ -0.27
CMTM3-209ENST00000565003 TGFB2P61812 414 aa13.39□□□□□ -0.27
CMTM3-209ENST00000565003 MCM10Q7L590 875 aa13.39□□□□□ -0.27
CMTM3-209ENST00000565003 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
CMTM3-209ENST00000565003 POLRMTO00411 1230 aaKnown RBP13.38□□□□□ -0.27
CMTM3-209ENST00000565003 ZPR1O75312 459 aa13.38□□□□□ -0.27
CMTM3-209ENST00000565003 DPEP1P16444 411 aa13.38□□□□□ -0.27
CMTM3-209ENST00000565003 TM4SF1P30408 202 aa13.38□□□□□ -0.27
CMTM3-209ENST00000565003 BCL2L12Q9HB09 334 aa13.38□□□□□ -0.27
CMTM3-209ENST00000565003 NARFQ9UHQ1 456 aa13.38□□□□□ -0.27
CMTM3-209ENST00000565003 ADCY9O60503 1353 aa13.37□□□□□ -0.27
CMTM3-209ENST00000565003 STARD3NLO95772 234 aa13.37□□□□□ -0.27
CMTM3-209ENST00000565003 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
CMTM3-209ENST00000565003 RTF1Q92541 710 aaKnown RBP13.37□□□□□ -0.27
CMTM3-209ENST00000565003 FMNL2Q96PY5 1086 aa13.37□□□□□ -0.27
CMTM3-209ENST00000565003 BRCA1P38398 1863 aaKnown RBP13.37□□□□□ -0.27
CMTM3-209ENST00000565003 EIF5P55010 431 aaKnown RBP13.36□□□□□ -0.27
CMTM3-209ENST00000565003 NFIXQ14938 502 aa13.36□□□□□ -0.27
CMTM3-209ENST00000565003 ATP10DQ9P241 1426 aa13.36□□□□□ -0.27
CMTM3-209ENST00000565003 SCN7AQ01118 1682 aa13.35□□□□□ -0.27
CMTM3-209ENST00000565003 KCNA3P22001 575 aa13.35□□□□□ -0.27
CMTM3-209ENST00000565003 PLEKHF1Q96S99 279 aa13.35□□□□□ -0.27
CMTM3-209ENST00000565003 TEX13AQ9BXU3 409 aaPredicted RBP13.35□□□□□ -0.27
CMTM3-209ENST00000565003 BCS1LQ9Y276 419 aa13.35□□□□□ -0.27
CMTM3-209ENST00000565003 NRXN2Q9P2S2 1712 aa13.35□□□□□ -0.27
CMTM3-209ENST00000565003 AFDNP55196 1824 aaKnown RBP13.34□□□□□ -0.27
CMTM3-209ENST00000565003 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
CMTM3-209ENST00000565003 HTATSF1O43719 755 aaKnown RBP13.34□□□□□ -0.27
CMTM3-209ENST00000565003 A1BGP04217 495 aa13.34□□□□□ -0.27
CMTM3-209ENST00000565003 DDX10Q13206 875 aaKnown RBP13.34□□□□□ -0.27
CMTM3-209ENST00000565003 ZNF330Q9Y3S2 320 aaPredicted RBP13.34□□□□□ -0.27
CMTM3-209ENST00000565003 USP16Q9Y5T5 823 aa13.34□□□□□ -0.27
CMTM3-209ENST00000565003 DLG5Q8TDM6 1919 aa13.34□□□□□ -0.27
CMTM3-209ENST00000565003 CHRNA5P30532 468 aa13.33□□□□□ -0.28
CMTM3-209ENST00000565003 A0A087WZG4 1122 aa13.32□□□□□ -0.28
CMTM3-209ENST00000565003 GIGYF1O75420 1035 aaPredicted RBP13.32□□□□□ -0.28
CMTM3-209ENST00000565003 IL6STP40189 918 aaPredicted RBP13.32□□□□□ -0.28
CMTM3-209ENST00000565003 PIP4K2AP48426 406 aaPredicted RBP13.32□□□□□ -0.28
CMTM3-209ENST00000565003 RALBP1Q15311 655 aa13.32□□□□□ -0.28
CMTM3-209ENST00000565003 TBC1D2BQ9UPU7 963 aa13.32□□□□□ -0.28
CMTM3-209ENST00000565003 ARFGEF1Q9Y6D6 1849 aa13.32□□□□□ -0.28
CMTM3-209ENST00000565003 CARMIL3Q8ND23 1372 aa13.32□□□□□ -0.28
CMTM3-209ENST00000565003 SERPINB2P05120 415 aa13.31□□□□□ -0.28
CMTM3-209ENST00000565003 NEFMP07197 916 aa13.31□□□□□ -0.28
CMTM3-209ENST00000565003 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
CMTM3-209ENST00000565003 C1QTNF8P60827 252 aa13.31□□□□□ -0.28
CMTM3-209ENST00000565003 TAF7Q15545 349 aaPredicted RBP13.31□□□□□ -0.28
CMTM3-209ENST00000565003 TBC1D9BQ66K14 1250 aa13.31□□□□□ -0.28
CMTM3-209ENST00000565003 BICDL1Q6ZP65 573 aa13.31□□□□□ -0.28
CMTM3-209ENST00000565003 MIS18AQ9NYP9 233 aa13.31□□□□□ -0.28
CMTM3-209ENST00000565003 PIM2Q9P1W9 311 aa13.31□□□□□ -0.28
CMTM3-209ENST00000565003 BCORQ6W2J9 1755 aa13.3□□□□□ -0.28
CMTM3-209ENST00000565003 CAMTA2O94983 1202 aa13.3□□□□□ -0.28
CMTM3-209ENST00000565003 NFE2L2Q16236 605 aa13.3□□□□□ -0.28
CMTM3-209ENST00000565003 THUMPD2Q9BTF0 503 aaKnown RBP13.3□□□□□ -0.28
CMTM3-209ENST00000565003 KDM3BQ7LBC6 1761 aa13.3□□□□□ -0.28
CMTM3-209ENST00000565003 DALRD3Q5D0E6 543 aaKnown RBP13.29□□□□□ -0.28
CMTM3-209ENST00000565003 ARHGAP27Q6ZUM4 889 aa13.29□□□□□ -0.28
CMTM3-209ENST00000565003 ZNF526Q8TF50 670 aaPredicted RBP13.29□□□□□ -0.28
CMTM3-209ENST00000565003 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
CMTM3-209ENST00000565003 MAPK8IP3Q9UPT6 1336 aa13.29□□□□□ -0.28
CMTM3-209ENST00000565003 DLEC1Q9Y238 1755 aa13.29□□□□□ -0.28
CMTM3-209ENST00000565003 LAMB4A4D0S4 1761 aa13.28□□□□□ -0.28
CMTM3-209ENST00000565003 NBPF26B4DH59 902 aa13.28□□□□□ -0.28
CMTM3-209ENST00000565003 NBPF10Q6P3W6 841 aaKnown RBP13.28□□□□□ -0.28
CMTM3-209ENST00000565003 DZIP3Q86Y13 1208 aaKnown RBP13.28□□□□□ -0.28
CMTM3-209ENST00000565003 NBPF15Q8N660 670 aa13.28□□□□□ -0.28
CMTM3-209ENST00000565003 GPBP1L1Q9HC44 474 aaPredicted RBP13.28□□□□□ -0.28
CMTM3-209ENST00000565003 ANKRD31Q8N7Z5 1873 aa13.27□□□□□ -0.28
CMTM3-209ENST00000565003 NPM2Q86SE8 214 aaKnown RBP13.27□□□□□ -0.29
CMTM3-209ENST00000565003 PNNQ9H307 717 aaKnown RBP13.27□□□□□ -0.29
CMTM3-209ENST00000565003 PRR5LQ6MZQ0 368 aa13.26□□□□□ -0.29
CMTM3-209ENST00000565003 CCDC24Q8N4L8 307 aa13.26□□□□□ -0.29
CMTM3-209ENST00000565003 COL11A2P13942 1736 aaPredicted RBP13.25□□□□□ -0.29
CMTM3-209ENST00000565003 EIF4A1P60842 406 aaKnown RBP13.25□□□□□ -0.29
CMTM3-209ENST00000565003 C2CD5Q86YS7 1000 aa13.25□□□□□ -0.29
CMTM3-209ENST00000565003 PNISRQ8TF01 805 aaKnown RBP13.25□□□□□ -0.29
CMTM3-209ENST00000565003 SENP3-EIF4A1A0A087X0R7 540 aa13.24□□□□□ -0.29
CMTM3-209ENST00000565003 C9orf131Q5VYM1 1079 aa13.24□□□□□ -0.29
CMTM3-209ENST00000565003 SETDB2Q96T68 719 aa13.24□□□□□ -0.29
CMTM3-209ENST00000565003 H0YIN7 160 aa13.23□□□□□ -0.29
CMTM3-209ENST00000565003 TMPOP42166 694 aaKnown RBP13.23□□□□□ -0.29
CMTM3-209ENST00000565003 RIPK4P57078 832 aa13.23□□□□□ -0.29
CMTM3-209ENST00000565003 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
CMTM3-209ENST00000565003 CCDC146Q8IYE0 955 aa13.23□□□□□ -0.29
CMTM3-209ENST00000565003 CNBD1Q8NA66 436 aa13.23□□□□□ -0.29
CMTM3-209ENST00000565003 BRIP1Q9BX63 1249 aa13.23□□□□□ -0.29
CMTM3-209ENST00000565003 KIF3CO14782 793 aa13.22□□□□□ -0.29
CMTM3-209ENST00000565003 RASSF7Q02833 373 aa13.22□□□□□ -0.29
CMTM3-209ENST00000565003 TTLL6Q8N841 843 aa13.22□□□□□ -0.29
CMTM3-209ENST00000565003 PRKRIP1Q9H875 184 aaPredicted RBP13.22□□□□□ -0.29
CMTM3-209ENST00000565003 RNF181Q9P0P0 153 aa13.22□□□□□ -0.29
CMTM3-209ENST00000565003 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
CMTM3-209ENST00000565003 RRP7AQ9Y3A4 280 aaKnown RBP13.22□□□□□ -0.29
CMTM3-209ENST00000565003 SBF1O95248 1867 aa13.22□□□□□ -0.29
CMTM3-209ENST00000565003 PDE6BP35913 854 aa13.21□□□□□ -0.29
CMTM3-209ENST00000565003 HLFQ16534 295 aa13.21□□□□□ -0.29
CMTM3-209ENST00000565003 TSPYL4Q9UJ04 414 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms