RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 TAF1LQ8IZX4 1826 aa9.65□□□□□ -0.86
GINS3-205ENST00000564814 KIF16BQ96L93 1317 aa9.64□□□□□ -0.87
GINS3-205ENST00000564814 PLSCR1O15162 318 aa9.64□□□□□ -0.87
GINS3-205ENST00000564814 CCDC30Q5VVM6 783 aa9.64□□□□□ -0.87
GINS3-205ENST00000564814 ARHGAP45Q92619 1136 aa9.64□□□□□ -0.87
GINS3-205ENST00000564814 LAS1LQ9Y4W2 734 aaKnown RBP9.64□□□□□ -0.87
GINS3-205ENST00000564814 N4BP2Q86UW6 1770 aaPredicted RBP9.64□□□□□ -0.87
GINS3-205ENST00000564814 PALLDQ8WX93 1383 aa9.63□□□□□ -0.87
GINS3-205ENST00000564814 KCNQ3O43525 872 aa9.63□□□□□ -0.87
GINS3-205ENST00000564814 APBA3O96018 575 aa9.63□□□□□ -0.87
GINS3-205ENST00000564814 SLC39A6Q13433 755 aa9.63□□□□□ -0.87
GINS3-205ENST00000564814 R3HDM1Q15032 1099 aaKnown RBP9.63□□□□□ -0.87
GINS3-205ENST00000564814 MIS18AQ9NYP9 233 aa9.63□□□□□ -0.87
GINS3-205ENST00000564814 ASAP1Q9ULH1 1129 aa9.63□□□□□ -0.87
GINS3-205ENST00000564814 RGL2O15211 777 aa9.62□□□□□ -0.87
GINS3-205ENST00000564814 KCNQ2O43526 872 aa9.62□□□□□ -0.87
GINS3-205ENST00000564814 NPM3O75607 178 aaKnown RBP9.62□□□□□ -0.87
GINS3-205ENST00000564814 CACNB1Q02641 598 aaPredicted RBP9.62□□□□□ -0.87
GINS3-205ENST00000564814 KRT24Q2M2I5 525 aa9.62□□□□□ -0.87
GINS3-205ENST00000564814 LRP10Q7Z4F1 713 aa9.62□□□□□ -0.87
GINS3-205ENST00000564814 PTPRCP08575 1304 aa9.61□□□□□ -0.87
GINS3-205ENST00000564814 PXDNLA1KZ92 1463 aa9.61□□□□□ -0.87
GINS3-205ENST00000564814 LOC102724428A0A0B4J2F2 783 aa9.61□□□□□ -0.87
GINS3-205ENST00000564814 SIK1P57059 783 aa9.61□□□□□ -0.87
GINS3-205ENST00000564814 SLC27A3Q5K4L6 730 aa9.61□□□□□ -0.87
GINS3-205ENST00000564814 HDGFL1Q5TGJ6 251 aa9.61□□□□□ -0.87
GINS3-205ENST00000564814 MRPL50Q8N5N7 158 aaKnown RBP9.61□□□□□ -0.87
GINS3-205ENST00000564814 ZNF784Q8NCA9 323 aaPredicted RBP9.61□□□□□ -0.87
GINS3-205ENST00000564814 SSH1Q8WYL5 1049 aa9.61□□□□□ -0.87
GINS3-205ENST00000564814 SLC4A9Q96Q91 983 aa9.61□□□□□ -0.87
GINS3-205ENST00000564814 CAMKK2Q96RR4 588 aa9.61□□□□□ -0.87
GINS3-205ENST00000564814 DDX21Q9NR30 783 aaKnown RBP eCLIP9.61□□□□□ -0.87
GINS3-205ENST00000564814 DBF4Q9UBU7 674 aaPredicted RBP9.61□□□□□ -0.87
GINS3-205ENST00000564814 CNTNAP4Q9C0A0 1308 aa9.6□□□□□ -0.87
GINS3-205ENST00000564814 PDE3AQ14432 1141 aa9.6□□□□□ -0.87
GINS3-205ENST00000564814 PDIA6Q15084 440 aa9.6□□□□□ -0.87
GINS3-205ENST00000564814 RC3H1Q5TC82 1133 aaKnown RBP9.6□□□□□ -0.87
GINS3-205ENST00000564814 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.6□□□□□ -0.87
GINS3-205ENST00000564814 ACSBG1Q96GR2 724 aa9.6□□□□□ -0.87
GINS3-205ENST00000564814 MYH14Q7Z406 1995 aaKnown RBP9.6□□□□□ -0.87
GINS3-205ENST00000564814 NUP188Q5SRE5 1749 aa9.59□□□□□ -0.87
GINS3-205ENST00000564814 IPO8O15397 1037 aaKnown RBP9.59□□□□□ -0.87
GINS3-205ENST00000564814 STARD3NLO95772 234 aa9.59□□□□□ -0.87
GINS3-205ENST00000564814 CYP19A1P11511 503 aaPredicted RBP9.59□□□□□ -0.87
GINS3-205ENST00000564814 MS4A1P11836 297 aa9.59□□□□□ -0.87
GINS3-205ENST00000564814 RRP1P56182 461 aaKnown RBP9.59□□□□□ -0.87
GINS3-205ENST00000564814 SYTL4Q96C24 671 aaPredicted RBP9.59□□□□□ -0.87
GINS3-205ENST00000564814 STK31Q9BXU1 1019 aa9.59□□□□□ -0.87
GINS3-205ENST00000564814 HYPKQ9NX55 129 aa9.59□□□□□ -0.87
GINS3-205ENST00000564814 USP16Q9Y5T5 823 aa9.59□□□□□ -0.87
GINS3-205ENST00000564814 QSER1Q2KHR3 1735 aa9.59□□□□□ -0.87
GINS3-205ENST00000564814 SMC4Q9NTJ3 1288 aa9.58□□□□□ -0.88
GINS3-205ENST00000564814 C4BP0C0L5 1744 aa9.58□□□□□ -0.88
GINS3-205ENST00000564814 ABCC4O15439 1325 aa9.57□□□□□ -0.88
GINS3-205ENST00000564814 PRAMEF22A3QJZ6 481 aa9.57□□□□□ -0.88
GINS3-205ENST00000564814 ELL2O00472 640 aaPredicted RBP9.57□□□□□ -0.88
GINS3-205ENST00000564814 PTCD1O75127 700 aaKnown RBP9.57□□□□□ -0.88
GINS3-205ENST00000564814 BCAR3O75815 825 aa9.57□□□□□ -0.88
GINS3-205ENST00000564814 SLC4A2P04920 1241 aa9.57□□□□□ -0.88
GINS3-205ENST00000564814 IL6STP40189 918 aaPredicted RBP9.57□□□□□ -0.88
GINS3-205ENST00000564814 AAMPQ13685 434 aa9.57□□□□□ -0.88
GINS3-205ENST00000564814 ERICH6BQ5W0A0 696 aa9.57□□□□□ -0.88
GINS3-205ENST00000564814 ATF7IPQ6VMQ6 1270 aa9.57□□□□□ -0.88
GINS3-205ENST00000564814 PTF1AQ7RTS3 328 aa9.57□□□□□ -0.88
GINS3-205ENST00000564814 RNF39Q9H2S5 420 aa9.57□□□□□ -0.88
GINS3-205ENST00000564814 BCORQ6W2J9 1755 aa9.57□□□□□ -0.88
GINS3-205ENST00000564814 UBR3Q6ZT12 1888 aa9.57□□□□□ -0.88
GINS3-205ENST00000564814 ATP10DQ9P241 1426 aa9.56□□□□□ -0.88
GINS3-205ENST00000564814 ATP6V1AP38606 617 aa9.56□□□□□ -0.88
GINS3-205ENST00000564814 FLIIQ13045 1269 aa9.56□□□□□ -0.88
GINS3-205ENST00000564814 ITPK1Q13572 414 aa9.56□□□□□ -0.88
GINS3-205ENST00000564814 NBPF14Q5TI25 921 aa9.56□□□□□ -0.88
GINS3-205ENST00000564814 ZKSCAN2Q63HK3 967 aa9.56□□□□□ -0.88
GINS3-205ENST00000564814 DNAJC10Q8IXB1 793 aa9.56□□□□□ -0.88
GINS3-205ENST00000564814 API5Q9BZZ5 524 aaKnown RBP9.56□□□□□ -0.88
GINS3-205ENST00000564814 CHPF2Q9P2E5 772 aa9.56□□□□□ -0.88
GINS3-205ENST00000564814 ARFGEF2Q9Y6D5 1785 aa9.55□□□□□ -0.88
GINS3-205ENST00000564814 SCN7AQ01118 1682 aa9.55□□□□□ -0.88
GINS3-205ENST00000564814 NBPF26B4DH59 902 aa9.55□□□□□ -0.88
GINS3-205ENST00000564814 TRIM27P14373 513 aa9.55□□□□□ -0.88
GINS3-205ENST00000564814 EIF5P55010 431 aaKnown RBP9.55□□□□□ -0.88
GINS3-205ENST00000564814 NBPF10Q6P3W6 841 aaKnown RBP9.55□□□□□ -0.88
GINS3-205ENST00000564814 NBPF15Q8N660 670 aa9.55□□□□□ -0.88
GINS3-205ENST00000564814 RBM42Q9BTD8 480 aaKnown RBP9.55□□□□□ -0.88
GINS3-205ENST00000564814 CCDC87Q9NVE4 849 aa9.55□□□□□ -0.88
GINS3-205ENST00000564814 SUPT16HQ9Y5B9 1047 aaKnown RBP9.55□□□□□ -0.88
GINS3-205ENST00000564814 ANKRD36CQ5JPF3 1778 aa9.55□□□□□ -0.88
GINS3-205ENST00000564814 EIF2S2P20042 333 aaKnown RBP9.54□□□□□ -0.88
GINS3-205ENST00000564814 CRKLP46109 303 aaKnown RBP9.54□□□□□ -0.88
GINS3-205ENST00000564814 INTS3Q68E01 1043 aaKnown RBP9.54□□□□□ -0.88
GINS3-205ENST00000564814 INTS5Q6P9B9 1019 aaKnown RBP9.54□□□□□ -0.88
GINS3-205ENST00000564814 PROM2Q8N271 834 aa9.54□□□□□ -0.88
GINS3-205ENST00000564814 LRRC4BQ9NT99 713 aa9.54□□□□□ -0.88
GINS3-205ENST00000564814 CCNL1Q9UK58 526 aaPredicted RBP9.54□□□□□ -0.88
GINS3-205ENST00000564814 NOB1Q9ULX3 412 aaKnown RBP9.54□□□□□ -0.88
GINS3-205ENST00000564814 C4AP0C0L4 1744 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 UTRNP46939 3433 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 ADCY9O60503 1353 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 ERVV-1B6SEH8 477 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 RPS6KA4O75676 772 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms