RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 SRGAP3O43295 1099 aa18.78■□□□□ 0.6
GTF3C1-205ENST00000564747 RHPN1Q8TCX5 695 aa18.78■□□□□ 0.6
GTF3C1-205ENST00000564747 AOX1Q06278 1338 aa18.78■□□□□ 0.6
GTF3C1-205ENST00000564747 POLA2Q14181 598 aa18.77■□□□□ 0.6
GTF3C1-205ENST00000564747 IL17RAQ96F46 866 aa18.77■□□□□ 0.6
GTF3C1-205ENST00000564747 LGR6Q9HBX8 967 aa18.77■□□□□ 0.6
GTF3C1-205ENST00000564747 PXDNLA1KZ92 1463 aa18.77■□□□□ 0.6
GTF3C1-205ENST00000564747 RAB11FIP3O75154 756 aa18.77■□□□□ 0.6
GTF3C1-205ENST00000564747 HSPA4P34932 840 aa18.77■□□□□ 0.6
GTF3C1-205ENST00000564747 PI4K2BQ8TCG2 481 aa18.77■□□□□ 0.6
GTF3C1-205ENST00000564747 PDLIM2Q96JY6 352 aa18.77■□□□□ 0.6
GTF3C1-205ENST00000564747 SLIT1O75093 1534 aa18.77■□□□□ 0.59
GTF3C1-205ENST00000564747 ARHGAP23Q9P227 1491 aa18.76■□□□□ 0.59
GTF3C1-205ENST00000564747 MSNP26038 577 aaKnown RBP18.76■□□□□ 0.59
GTF3C1-205ENST00000564747 MBD3O95983 291 aa18.76■□□□□ 0.59
GTF3C1-205ENST00000564747 CHPF2Q9P2E5 772 aa18.76■□□□□ 0.59
GTF3C1-205ENST00000564747 PI4KAP2A4QPH2 592 aa18.75■□□□□ 0.59
GTF3C1-205ENST00000564747 KCNQ3O43525 872 aa18.75■□□□□ 0.59
GTF3C1-205ENST00000564747 EIF4A1P60842 406 aaKnown RBP18.75■□□□□ 0.59
GTF3C1-205ENST00000564747 PI4KAP1Q8N8J0 262 aa18.75■□□□□ 0.59
GTF3C1-205ENST00000564747 GDPD2Q9HCC8 539 aa18.75■□□□□ 0.59
GTF3C1-205ENST00000564747 ANXA1P04083 346 aa18.75■□□□□ 0.59
GTF3C1-205ENST00000564747 TPM2P07951 284 aa18.75■□□□□ 0.59
GTF3C1-205ENST00000564747 THEMISQ8N1K5 641 aaPredicted RBP18.75■□□□□ 0.59
GTF3C1-205ENST00000564747 MARF1Q9Y4F3 1742 aaKnown RBP18.75■□□□□ 0.59
GTF3C1-205ENST00000564747 NBPF6Q5VWK0 638 aa18.74■□□□□ 0.59
GTF3C1-205ENST00000564747 NBPF4Q96M43 638 aa18.74■□□□□ 0.59
GTF3C1-205ENST00000564747 BEND3Q5T5X7 828 aa18.74■□□□□ 0.59
GTF3C1-205ENST00000564747 KIF1BPQ96EK5 621 aa18.74■□□□□ 0.59
GTF3C1-205ENST00000564747 CEMIPQ8WUJ3 1361 aa18.73■□□□□ 0.59
GTF3C1-205ENST00000564747 SGSM2O43147 1006 aa18.73■□□□□ 0.59
GTF3C1-205ENST00000564747 RNF214Q8ND24 703 aa18.73■□□□□ 0.59
GTF3C1-205ENST00000564747 ANKARQ7Z5J8 1434 aa18.73■□□□□ 0.59
GTF3C1-205ENST00000564747 GADD45BO75293 160 aaPredicted RBP18.73■□□□□ 0.59
GTF3C1-205ENST00000564747 DNAAF4Q8WXU2 420 aa18.73■□□□□ 0.59
GTF3C1-205ENST00000564747 HS1BP3Q53T59 392 aa18.72■□□□□ 0.59
GTF3C1-205ENST00000564747 LARP6Q9BRS8 491 aaKnown RBP18.72■□□□□ 0.59
GTF3C1-205ENST00000564747 SNX14Q9Y5W7 946 aa18.72■□□□□ 0.59
GTF3C1-205ENST00000564747 N4BP2Q86UW6 1770 aaPredicted RBP18.72■□□□□ 0.59
GTF3C1-205ENST00000564747 SETD1BQ9UPS6 1966 aaKnown RBP18.72■□□□□ 0.59
GTF3C1-205ENST00000564747 RASEFQ8IZ41 740 aa18.72■□□□□ 0.59
GTF3C1-205ENST00000564747 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.72■□□□□ 0.59
GTF3C1-205ENST00000564747 RAD50Q92878 1312 aa18.72■□□□□ 0.59
GTF3C1-205ENST00000564747 ZBTB7CA1YPR0 619 aa18.71■□□□□ 0.59
GTF3C1-205ENST00000564747 EPB41L2O43491 1005 aaKnown RBP18.71■□□□□ 0.59
GTF3C1-205ENST00000564747 VSIG10Q8N0Z9 540 aa18.71■□□□□ 0.59
GTF3C1-205ENST00000564747 NOL7Q9UMY1 257 aaKnown RBP18.71■□□□□ 0.59
GTF3C1-205ENST00000564747 CWC27Q6UX04 472 aaKnown RBP18.71■□□□□ 0.59
GTF3C1-205ENST00000564747 KIAA1211Q6ZU35 1233 aa18.71■□□□□ 0.59
GTF3C1-205ENST00000564747 IP6K1Q92551 441 aa18.71■□□□□ 0.59
GTF3C1-205ENST00000564747 LSG1Q9H089 658 aaKnown RBP18.71■□□□□ 0.59
GTF3C1-205ENST00000564747 USP48Q86UV5 1035 aa18.7■□□□□ 0.58
GTF3C1-205ENST00000564747 SPG7Q9UQ90 795 aa18.7■□□□□ 0.58
GTF3C1-205ENST00000564747 OFD1O75665 1012 aa18.7■□□□□ 0.58
GTF3C1-205ENST00000564747 CNTROBQ8N137 903 aa18.7■□□□□ 0.58
GTF3C1-205ENST00000564747 RBM33Q96EV2 1170 aaKnown RBP18.7■□□□□ 0.58
GTF3C1-205ENST00000564747 WDR33Q9C0J8 1336 aaKnown RBP18.7■□□□□ 0.58
GTF3C1-205ENST00000564747 PLEKHG5O94827 1062 aa18.69■□□□□ 0.58
GTF3C1-205ENST00000564747 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
GTF3C1-205ENST00000564747 PHF8Q9UPP1 1060 aa18.69■□□□□ 0.58
GTF3C1-205ENST00000564747 MPRIPQ6WCQ1 1025 aa18.69■□□□□ 0.58
GTF3C1-205ENST00000564747 TTC14Q96N46 770 aa18.69■□□□□ 0.58
GTF3C1-205ENST00000564747 AK2P54819 239 aa18.68■□□□□ 0.58
GTF3C1-205ENST00000564747 BTBD11A6QL63 1104 aa18.68■□□□□ 0.58
GTF3C1-205ENST00000564747 CPA1P15085 419 aa18.68■□□□□ 0.58
GTF3C1-205ENST00000564747 TEFQ10587 303 aa18.68■□□□□ 0.58
GTF3C1-205ENST00000564747 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
GTF3C1-205ENST00000564747 LRRC59Q96AG4 307 aaKnown RBP18.68■□□□□ 0.58
GTF3C1-205ENST00000564747 HOXB7P09629 217 aa18.67■□□□□ 0.58
GTF3C1-205ENST00000564747 ADCY9O60503 1353 aa18.67■□□□□ 0.58
GTF3C1-205ENST00000564747 RPAP1Q9BWH6 1393 aaPredicted RBP18.67■□□□□ 0.58
GTF3C1-205ENST00000564747 RUFY3Q7L099 469 aa18.67■□□□□ 0.58
GTF3C1-205ENST00000564747 TSPY26PQ9H489 355 aa18.67■□□□□ 0.58
GTF3C1-205ENST00000564747 TCHHQ07283 1943 aa18.67■□□□□ 0.58
GTF3C1-205ENST00000564747 TPRNQ4KMQ1 711 aa18.66■□□□□ 0.58
GTF3C1-205ENST00000564747 HSP90AB4PQ58FF6 505 aa18.66■□□□□ 0.58
GTF3C1-205ENST00000564747 ZNF530Q6P9A1 599 aaPredicted RBP18.66■□□□□ 0.58
GTF3C1-205ENST00000564747 SYAP1Q96A49 352 aaPredicted RBP18.66■□□□□ 0.58
GTF3C1-205ENST00000564747 DTNBO60941 627 aa18.65■□□□□ 0.58
GTF3C1-205ENST00000564747 XPCQ01831 940 aaPredicted RBP18.65■□□□□ 0.58
GTF3C1-205ENST00000564747 ZNF500O60304 480 aaPredicted RBP18.65■□□□□ 0.58
GTF3C1-205ENST00000564747 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.65■□□□□ 0.58
GTF3C1-205ENST00000564747 LIMCH1Q9UPQ0 1083 aa18.65■□□□□ 0.58
GTF3C1-205ENST00000564747 LTN1O94822 1766 aa18.65■□□□□ 0.58
GTF3C1-205ENST00000564747 GLRX3O76003 335 aaKnown RBP18.64■□□□□ 0.58
GTF3C1-205ENST00000564747 PA2G4Q9UQ80 394 aaKnown RBP18.64■□□□□ 0.58
GTF3C1-205ENST00000564747 CNPY2Q9Y2B0 182 aa18.64■□□□□ 0.58
GTF3C1-205ENST00000564747 ZKSCAN5Q9Y2L8 839 aa18.64■□□□□ 0.58
GTF3C1-205ENST00000564747 CASTP20810 708 aaKnown RBP18.64■□□□□ 0.57
GTF3C1-205ENST00000564747 PTH1RQ03431 593 aa18.64■□□□□ 0.57
GTF3C1-205ENST00000564747 PKNOX2Q96KN3 472 aa18.64■□□□□ 0.57
GTF3C1-205ENST00000564747 ZSCAN22P10073 491 aaPredicted RBP18.64■□□□□ 0.57
GTF3C1-205ENST00000564747 SYT1P21579 422 aa18.64■□□□□ 0.57
GTF3C1-205ENST00000564747 PROSER3Q2NL68 480 aa18.64■□□□□ 0.57
GTF3C1-205ENST00000564747 AKAP4Q5JQC9 854 aa18.64■□□□□ 0.57
GTF3C1-205ENST00000564747 CLASRPQ8N2M8 674 aaKnown RBP18.64■□□□□ 0.57
GTF3C1-205ENST00000564747 DIAPH3Q9NSV4 1193 aa18.64■□□□□ 0.57
GTF3C1-205ENST00000564747 C9orf78Q9NZ63 289 aaPredicted RBP18.64■□□□□ 0.57
GTF3C1-205ENST00000564747 MAP3K2Q9Y2U5 619 aa18.64■□□□□ 0.57
GTF3C1-205ENST00000564747 TTC41PQ6P2S7 1318 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms