RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 NFAT5O94916 1531 aa9.05□□□□□ -0.96
HERPUD1-209ENST00000564678 BRD1O95696 1058 aa9.05□□□□□ -0.96
HERPUD1-209ENST00000564678 KCNA1Q09470 495 aa9.05□□□□□ -0.96
HERPUD1-209ENST00000564678 BECN1Q14457 450 aa9.05□□□□□ -0.96
HERPUD1-209ENST00000564678 TAF7Q15545 349 aaPredicted RBP9.05□□□□□ -0.96
HERPUD1-209ENST00000564678 TBC1D32Q96NH3 1257 aa9.05□□□□□ -0.96
HERPUD1-209ENST00000564678 C19orf44Q9H6X5 657 aa9.05□□□□□ -0.96
HERPUD1-209ENST00000564678 MAP3K5Q99683 1374 aa9.05□□□□□ -0.96
HERPUD1-209ENST00000564678 KRT24Q2M2I5 525 aa9.05□□□□□ -0.96
HERPUD1-209ENST00000564678 CCDC30Q5VVM6 783 aa9.05□□□□□ -0.96
HERPUD1-209ENST00000564678 CCDC125Q86Z20 511 aa9.05□□□□□ -0.96
HERPUD1-209ENST00000564678 CREBZFQ9NS37 354 aa9.05□□□□□ -0.96
HERPUD1-209ENST00000564678 LTN1O94822 1766 aa9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 LRRC37A3O60309 1634 aa9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 RGS12O14924 1447 aa9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 NCOA3Q9Y6Q9 1424 aa9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 PDAP1Q13442 181 aaKnown RBP9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 BMP2KLQ5H9B9 411 aa9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 RTL5Q5HYW3 569 aaPredicted RBP9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 ANKRD45Q5TZF3 282 aa9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 SIRT2Q8IXJ6 389 aa9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 ANKRD44Q8N8A2 993 aa9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 PROCA1Q8NCQ7 364 aaPredicted RBP9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 IL17REQ8NFR9 667 aa9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 STK31Q9BXU1 1019 aa9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 DCTPP1Q9H773 170 aa9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 MST1RQ04912 1400 aa9.04□□□□□ -0.96
HERPUD1-209ENST00000564678 GCP02774 474 aa9.03□□□□□ -0.96
HERPUD1-209ENST00000564678 CCT4P50991 539 aaKnown RBP9.03□□□□□ -0.96
HERPUD1-209ENST00000564678 ARHGEF25Q86VW2 580 aa9.03□□□□□ -0.96
HERPUD1-209ENST00000564678 LNPKQ9C0E8 428 aa9.03□□□□□ -0.96
HERPUD1-209ENST00000564678 AMOTQ4VCS5 1084 aa9.03□□□□□ -0.96
HERPUD1-209ENST00000564678 RBM33Q96EV2 1170 aaKnown RBP9.03□□□□□ -0.96
HERPUD1-209ENST00000564678 ORAI2Q96SN7 254 aa9.03□□□□□ -0.96
HERPUD1-209ENST00000564678 CWC22Q9HCG8 908 aaKnown RBP9.03□□□□□ -0.96
HERPUD1-209ENST00000564678 MIS18AQ9NYP9 233 aa9.03□□□□□ -0.96
HERPUD1-209ENST00000564678 MSH6P52701 1360 aa9.02□□□□□ -0.96
HERPUD1-209ENST00000564678 CEMIPQ8WUJ3 1361 aa9.02□□□□□ -0.96
HERPUD1-209ENST00000564678 SLIT3O75094 1523 aa9.02□□□□□ -0.97
HERPUD1-209ENST00000564678 NBPF6Q5VWK0 638 aa9.02□□□□□ -0.97
HERPUD1-209ENST00000564678 LTV1Q96GA3 475 aaPredicted RBP9.02□□□□□ -0.97
HERPUD1-209ENST00000564678 NBPF4Q96M43 638 aa9.02□□□□□ -0.97
HERPUD1-209ENST00000564678 SNRKQ9NRH2 765 aa9.02□□□□□ -0.97
HERPUD1-209ENST00000564678 KIF1AQ12756 1690 aa9.02□□□□□ -0.97
HERPUD1-209ENST00000564678 DPYSL4O14531 572 aa9.02□□□□□ -0.97
HERPUD1-209ENST00000564678 HOXB7P09629 217 aa9.02□□□□□ -0.97
HERPUD1-209ENST00000564678 BRD2P25440 801 aaKnown RBP9.02□□□□□ -0.97
HERPUD1-209ENST00000564678 PLEKHO1Q53GL0 409 aaPredicted RBP9.02□□□□□ -0.97
HERPUD1-209ENST00000564678 SH3D19Q5HYK7 790 aa9.02□□□□□ -0.97
HERPUD1-209ENST00000564678 SND1Q7KZF4 910 aaKnown RBP eCLIP9.02□□□□□ -0.974e-8■■■□□ 18
HERPUD1-209ENST00000564678 EFCAB3Q8N7B9 438 aa9.02□□□□□ -0.97
HERPUD1-209ENST00000564678 C1orf167Q5SNV9 1468 aa9.01□□□□□ -0.97
HERPUD1-209ENST00000564678 DCCP43146 1447 aa9.01□□□□□ -0.97
HERPUD1-209ENST00000564678 NCAPD2Q15021 1401 aa9.01□□□□□ -0.97
HERPUD1-209ENST00000564678 AKAP4Q5JQC9 854 aa9.01□□□□□ -0.97
HERPUD1-209ENST00000564678 KRT28Q7Z3Y7 464 aa9.01□□□□□ -0.97
HERPUD1-209ENST00000564678 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9□□□□□ -0.97
HERPUD1-209ENST00000564678 HMMRO75330 724 aa9□□□□□ -0.97
HERPUD1-209ENST00000564678 CEP85Q6P2H3 762 aa9□□□□□ -0.97
HERPUD1-209ENST00000564678 C22orf23Q9BZE7 217 aa9□□□□□ -0.97
HERPUD1-209ENST00000564678 KIAA1522Q9P206 1035 aaPredicted RBP9□□□□□ -0.97
HERPUD1-209ENST00000564678 POM121CA8CG34 1229 aa9□□□□□ -0.97
HERPUD1-209ENST00000564678 ATP10DQ9P241 1426 aa9□□□□□ -0.97
HERPUD1-209ENST00000564678 TRPM3Q9HCF6 1732 aaPredicted RBP8.99□□□□□ -0.97
HERPUD1-209ENST00000564678 GNAI3P08754 354 aa8.99□□□□□ -0.97
HERPUD1-209ENST00000564678 SLC4A3P48751 1232 aa8.99□□□□□ -0.97
HERPUD1-209ENST00000564678 G2E3Q7L622 706 aa8.99□□□□□ -0.97
HERPUD1-209ENST00000564678 OVOS2A0A0G2JMS6 1433 aa8.99□□□□□ -0.97
HERPUD1-209ENST00000564678 PATL2C9JE40 543 aaKnown RBP8.99□□□□□ -0.97
HERPUD1-209ENST00000564678 ATF3P18847 181 aa8.99□□□□□ -0.97
HERPUD1-209ENST00000564678 ZNF467Q7Z7K2 595 aaPredicted RBP8.99□□□□□ -0.97
HERPUD1-209ENST00000564678 CALR3Q96L12 384 aaKnown RBP8.99□□□□□ -0.97
HERPUD1-209ENST00000564678 MEIS3Q99687 375 aa8.99□□□□□ -0.97
HERPUD1-209ENST00000564678 MED1Q15648 1581 aaPredicted RBP8.98□□□□□ -0.97
HERPUD1-209ENST00000564678 GNAI2P04899 355 aa8.98□□□□□ -0.97
HERPUD1-209ENST00000564678 USHBP1Q8N6Y0 703 aa8.98□□□□□ -0.97
HERPUD1-209ENST00000564678 PLEKHG2Q9H7P9 1386 aa8.98□□□□□ -0.97
HERPUD1-209ENST00000564678 LMTK3Q96Q04 1460 aa8.98□□□□□ -0.97
HERPUD1-209ENST00000564678 SMARCA5O60264 1052 aaPredicted RBP8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 EIF4A1P60842 406 aaKnown RBP8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 FKBP5Q13451 457 aaPredicted RBP8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 SLC4A10Q6U841 1118 aa8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 PLEKHM2Q8IWE5 1019 aa8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 ANKRD24Q8TF21 1146 aa8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 GLMNQ92990 594 aa8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 PXDNLA1KZ92 1463 aa8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 LMO7Q8WWI1 1683 aa8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 PSEN1P49768 467 aa8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 TEFQ10587 303 aa8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 C1orf141Q5JVX7 400 aa8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 HDGFL1Q5TGJ6 251 aa8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 ZNF530Q6P9A1 599 aaPredicted RBP8.97□□□□□ -0.97
HERPUD1-209ENST00000564678 FAM208AQ9UK61 1670 aaKnown RBP8.96□□□□□ -0.97
HERPUD1-209ENST00000564678 CAMTA1Q9Y6Y1 1673 aa8.96□□□□□ -0.97
HERPUD1-209ENST00000564678 F6X3S4 739 aa8.96□□□□□ -0.97
HERPUD1-209ENST00000564678 NFKBIBQ15653 356 aa8.96□□□□□ -0.97
HERPUD1-209ENST00000564678 TBC1D2Q9BYX2 928 aa8.96□□□□□ -0.97
HERPUD1-209ENST00000564678 LGR6Q9HBX8 967 aa8.96□□□□□ -0.97
HERPUD1-209ENST00000564678 GDPD2Q9HCC8 539 aa8.96□□□□□ -0.97
HERPUD1-209ENST00000564678 EMILIN3Q9NT22 766 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms