RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 PHAXQ9H814 394 aaKnown RBP19.52■□□□□ 0.72
COMMD4-210ENST00000564587 HDAC5Q9UQL6 1122 aa19.52■□□□□ 0.72
COMMD4-210ENST00000564587 ATP10DQ9P241 1426 aa19.51■□□□□ 0.71
COMMD4-210ENST00000564587 PAPPAQ13219 1627 aa19.51■□□□□ 0.71
COMMD4-210ENST00000564587 DNAAF4Q8WXU2 420 aa19.51■□□□□ 0.71
COMMD4-210ENST00000564587 UBR2Q8IWV8 1755 aa19.51■□□□□ 0.71
COMMD4-210ENST00000564587 SRCAPQ6ZRS2 3230 aa19.5■□□□□ 0.71
COMMD4-210ENST00000564587 LAMB4A4D0S4 1761 aa19.5■□□□□ 0.71
COMMD4-210ENST00000564587 HMMRO75330 724 aa19.5■□□□□ 0.71
COMMD4-210ENST00000564587 KSR2Q6VAB6 950 aa19.5■□□□□ 0.71
COMMD4-210ENST00000564587 ANKRD44Q8N8A2 993 aa19.5■□□□□ 0.71
COMMD4-210ENST00000564587 TEX13AQ9BXU3 409 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-210ENST00000564587 SRCIN1Q9C0H9 1055 aa19.5■□□□□ 0.71
COMMD4-210ENST00000564587 PDZRN3Q9UPQ7 1066 aa19.5■□□□□ 0.71
COMMD4-210ENST00000564587 IBTKQ9P2D0 1353 aaPredicted RBP19.49■□□□□ 0.71
COMMD4-210ENST00000564587 GNAI2P04899 355 aa19.49■□□□□ 0.71
COMMD4-210ENST00000564587 VPS72Q15906 364 aa19.49■□□□□ 0.71
COMMD4-210ENST00000564587 DDB1Q16531 1140 aa19.49■□□□□ 0.71
COMMD4-210ENST00000564587 FNBP4Q8N3X1 1017 aaPredicted RBP19.49■□□□□ 0.71
COMMD4-210ENST00000564587 NGLY1Q96IV0 654 aa19.49■□□□□ 0.71
COMMD4-210ENST00000564587 C5P01031 1676 aa19.49■□□□□ 0.71
COMMD4-210ENST00000564587 ALDH1L1O75891 902 aa19.48■□□□□ 0.71
COMMD4-210ENST00000564587 VSIG10Q8N0Z9 540 aa19.48■□□□□ 0.71
COMMD4-210ENST00000564587 MEIS3Q99687 375 aa19.48■□□□□ 0.71
COMMD4-210ENST00000564587 PI4KAP2A4QPH2 592 aa19.47■□□□□ 0.71
COMMD4-210ENST00000564587 PDIA6Q15084 440 aa19.47■□□□□ 0.71
COMMD4-210ENST00000564587 PI4KAP1Q8N8J0 262 aa19.47■□□□□ 0.71
COMMD4-210ENST00000564587 CCDC9Q9Y3X0 531 aaKnown RBP19.47■□□□□ 0.71
COMMD4-210ENST00000564587 TOGARAM1Q9Y4F4 1720 aa19.47■□□□□ 0.71
COMMD4-210ENST00000564587 PRAMEF22A3QJZ6 481 aa19.46■□□□□ 0.71
COMMD4-210ENST00000564587 RGS3P49796 1198 aa19.46■□□□□ 0.71
COMMD4-210ENST00000564587 CEP85Q6P2H3 762 aa19.46■□□□□ 0.71
COMMD4-210ENST00000564587 C1orf115Q9H7X2 142 aa19.46■□□□□ 0.71
COMMD4-210ENST00000564587 RBM19Q9Y4C8 960 aaKnown RBP19.46■□□□□ 0.71
COMMD4-210ENST00000564587 KCPQ6ZWJ8 1503 aa19.46■□□□□ 0.71
COMMD4-210ENST00000564587 NUCB1Q02818 461 aa19.45■□□□□ 0.7
COMMD4-210ENST00000564587 BEND3Q5T5X7 828 aa19.45■□□□□ 0.7
COMMD4-210ENST00000564587 MEX3CQ5U5Q3 659 aaKnown RBP19.45■□□□□ 0.7
COMMD4-210ENST00000564587 C8orf37Q96NL8 207 aa19.45■□□□□ 0.7
COMMD4-210ENST00000564587 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
COMMD4-210ENST00000564587 ITGB4P16144 1822 aa19.45■□□□□ 0.7
COMMD4-210ENST00000564587 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.45■□□□□ 0.7
COMMD4-210ENST00000564587 ADCY9O60503 1353 aa19.44■□□□□ 0.7
COMMD4-210ENST00000564587 UBTFL1P0CB47 393 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-210ENST00000564587 PROSER3Q2NL68 480 aa19.44■□□□□ 0.7
COMMD4-210ENST00000564587 SIRT2Q8IXJ6 389 aa19.44■□□□□ 0.7
COMMD4-210ENST00000564587 DCTPP1Q9H773 170 aa19.44■□□□□ 0.7
COMMD4-210ENST00000564587 MAP3K2Q9Y2U5 619 aa19.44■□□□□ 0.7
COMMD4-210ENST00000564587 GLI3P10071 1580 aa19.44■□□□□ 0.7
COMMD4-210ENST00000564587 BCL9O00512 1426 aa19.43■□□□□ 0.7
COMMD4-210ENST00000564587 BCL9LQ86UU0 1499 aa19.43■□□□□ 0.7
COMMD4-210ENST00000564587 ANXA1P04083 346 aa19.43■□□□□ 0.7
COMMD4-210ENST00000564587 PDE4AP27815 886 aa19.43■□□□□ 0.7
COMMD4-210ENST00000564587 NEXNQ0ZGT2 675 aa19.43■□□□□ 0.7
COMMD4-210ENST00000564587 LINS1Q8NG48 757 aa19.43■□□□□ 0.7
COMMD4-210ENST00000564587 PIGBQ92521 554 aa19.43■□□□□ 0.7
COMMD4-210ENST00000564587 USP44Q9H0E7 712 aa19.43■□□□□ 0.7
COMMD4-210ENST00000564587 ZBTB47Q9UFB7 747 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-210ENST00000564587 FAM161AQ3B820 660 aa19.42■□□□□ 0.7
COMMD4-210ENST00000564587 RIC3Q7Z5B4 369 aa19.42■□□□□ 0.7
COMMD4-210ENST00000564587 BACH2Q9BYV9 841 aa19.42■□□□□ 0.7
COMMD4-210ENST00000564587 CHD1LQ86WJ1 897 aa19.41■□□□□ 0.7
COMMD4-210ENST00000564587 XAGE3Q8WTP9 111 aa19.41■□□□□ 0.7
COMMD4-210ENST00000564587 MYL6BP14649 208 aa19.4■□□□□ 0.7
COMMD4-210ENST00000564587 ATP8B2P98198 1209 aa19.4■□□□□ 0.7
COMMD4-210ENST00000564587 ANKRD13DQ6ZTN6 518 aa19.4■□□□□ 0.7
COMMD4-210ENST00000564587 COPS6Q7L5N1 327 aa19.4■□□□□ 0.7
COMMD4-210ENST00000564587 ATG3Q9NT62 314 aa19.4■□□□□ 0.7
COMMD4-210ENST00000564587 USP21Q9UK80 565 aa19.4■□□□□ 0.7
COMMD4-210ENST00000564587 PTCD1O75127 700 aaKnown RBP19.39■□□□□ 0.69
COMMD4-210ENST00000564587 STARD3NLO95772 234 aa19.39■□□□□ 0.69
COMMD4-210ENST00000564587 AIMP1Q12904 312 aaKnown RBP19.39■□□□□ 0.69
COMMD4-210ENST00000564587 ZNF772Q68DY9 489 aaPredicted RBP19.39■□□□□ 0.69
COMMD4-210ENST00000564587 LRP10Q7Z4F1 713 aa19.39■□□□□ 0.69
COMMD4-210ENST00000564587 METTL22Q9BUU2 404 aaPredicted RBP19.39■□□□□ 0.69
COMMD4-210ENST00000564587 ANKRD45Q5TZF3 282 aa19.38■□□□□ 0.69
COMMD4-210ENST00000564587 PLBD2Q8NHP8 589 aa19.38■□□□□ 0.69
COMMD4-210ENST00000564587 SKAP1Q86WV1 359 aa19.37■□□□□ 0.69
COMMD4-210ENST00000564587 C9orf78Q9NZ63 289 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-210ENST00000564587 ASAP1Q9ULH1 1129 aa19.37■□□□□ 0.69
COMMD4-210ENST00000564587 UTYO14607 1347 aa19.36■□□□□ 0.69
COMMD4-210ENST00000564587 RXRBP28702 533 aa19.36■□□□□ 0.69
COMMD4-210ENST00000564587 MARCH10Q8NA82 808 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-210ENST00000564587 LRRFIP2Q9Y608 721 aaKnown RBP19.36■□□□□ 0.69
COMMD4-210ENST00000564587 DOT1LQ8TEK3 1739 aa19.36■□□□□ 0.69
COMMD4-210ENST00000564587 KAT6BQ8WYB5 2073 aa19.36■□□□□ 0.69
COMMD4-210ENST00000564587 PRIM1P49642 420 aaKnown RBP19.35■□□□□ 0.69
COMMD4-210ENST00000564587 SMARCC1Q92922 1105 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-210ENST00000564587 SYTL4Q96C24 671 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-210ENST00000564587 NBPF26B4DH59 902 aa19.34■□□□□ 0.69
COMMD4-210ENST00000564587 GRM8O00222 908 aa19.34■□□□□ 0.69
COMMD4-210ENST00000564587 FAM98CQ17RN3 349 aaKnown RBP19.34■□□□□ 0.69
COMMD4-210ENST00000564587 NBPF14Q5TI25 921 aa19.34■□□□□ 0.69
COMMD4-210ENST00000564587 NBPF10Q6P3W6 841 aaKnown RBP19.34■□□□□ 0.69
COMMD4-210ENST00000564587 NBPF15Q8N660 670 aa19.34■□□□□ 0.69
COMMD4-210ENST00000564587 RBM42Q9BTD8 480 aaKnown RBP19.34■□□□□ 0.69
COMMD4-210ENST00000564587 LNPKQ9C0E8 428 aa19.34■□□□□ 0.69
COMMD4-210ENST00000564587 MTX1Q13505 466 aa19.33■□□□□ 0.68
COMMD4-210ENST00000564587 SSH3Q8TE77 659 aa19.33■□□□□ 0.68
COMMD4-210ENST00000564587 NEURL1BA8MQ27 555 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms