RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 API5Q9BZZ5 524 aaKnown RBP11.22□□□□□ -0.61
TCF4-224ENST00000564403 TMEM94Q12767 1356 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 APBB1O00213 710 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 ARHGEF25Q86VW2 580 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 MEIS3Q99687 375 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 YY1AP1Q9H869 796 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 KIF20AO95235 890 aa11.21□□□□□ -0.61
TCF4-224ENST00000564403 TPM2P07951 284 aa11.21□□□□□ -0.61
TCF4-224ENST00000564403 ARMCX6Q7L4S7 300 aa11.21□□□□□ -0.61
TCF4-224ENST00000564403 MSH6P52701 1360 aa11.21□□□□□ -0.62
TCF4-224ENST00000564403 ATF3P18847 181 aa11.21□□□□□ -0.62
TCF4-224ENST00000564403 ARID4AP29374 1257 aaPredicted RBP11.21□□□□□ -0.62
TCF4-224ENST00000564403 NUCB1Q02818 461 aa11.21□□□□□ -0.62
TCF4-224ENST00000564403 SLC20A2Q08357 652 aa11.21□□□□□ -0.62
TCF4-224ENST00000564403 SPTY2D1Q68D10 685 aaPredicted RBP11.21□□□□□ -0.62
TCF4-224ENST00000564403 CHD1LQ86WJ1 897 aa11.21□□□□□ -0.62
TCF4-224ENST00000564403 KCNH5Q8NCM2 988 aa11.21□□□□□ -0.62
TCF4-224ENST00000564403 ANKRD24Q8TF21 1146 aa11.2□□□□□ -0.62
TCF4-224ENST00000564403 RGS12O14924 1447 aa11.2□□□□□ -0.62
TCF4-224ENST00000564403 BRD1O95696 1058 aa11.2□□□□□ -0.62
TCF4-224ENST00000564403 EIF2S2P20042 333 aaKnown RBP11.2□□□□□ -0.62
TCF4-224ENST00000564403 KIAA0232Q92628 1395 aa11.2□□□□□ -0.62
TCF4-224ENST00000564403 ANXA1P04083 346 aa11.19□□□□□ -0.62
TCF4-224ENST00000564403 TAF7Q15545 349 aaPredicted RBP11.19□□□□□ -0.62
TCF4-224ENST00000564403 INTS3Q68E01 1043 aaKnown RBP11.19□□□□□ -0.62
TCF4-224ENST00000564403 C16orf71Q8IYS4 520 aaPredicted RBP11.19□□□□□ -0.62
TCF4-224ENST00000564403 MAP3K5Q99683 1374 aa11.19□□□□□ -0.62
TCF4-224ENST00000564403 C1orf167Q5SNV9 1468 aa11.19□□□□□ -0.62
TCF4-224ENST00000564403 CHRNA2Q15822 529 aa11.19□□□□□ -0.62
TCF4-224ENST00000564403 RIPOR2Q9Y4F9 1068 aa11.19□□□□□ -0.62
TCF4-224ENST00000564403 NFAT5O94916 1531 aa11.19□□□□□ -0.62
TCF4-224ENST00000564403 LTN1O94822 1766 aa11.19□□□□□ -0.62
TCF4-224ENST00000564403 ZNF530Q6P9A1 599 aaPredicted RBP11.18□□□□□ -0.62
TCF4-224ENST00000564403 BANK1Q8NDB2 785 aa11.18□□□□□ -0.62
TCF4-224ENST00000564403 PHAXQ9H814 394 aaKnown RBP11.18□□□□□ -0.62
TCF4-224ENST00000564403 MFAP1P55081 439 aaKnown RBP11.18□□□□□ -0.62
TCF4-224ENST00000564403 FKBP5Q13451 457 aaPredicted RBP11.18□□□□□ -0.62
TCF4-224ENST00000564403 EP400NLQ6ZTU2 488 aa11.18□□□□□ -0.62
TCF4-224ENST00000564403 MAP7D2Q96T17 732 aa11.18□□□□□ -0.62
TCF4-224ENST00000564403 KIF24Q5T7B8 1368 aa11.17□□□□□ -0.62
TCF4-224ENST00000564403 GOLIM4O00461 696 aa11.17□□□□□ -0.62
TCF4-224ENST00000564403 ZNF513Q8N8E2 541 aaPredicted RBP11.17□□□□□ -0.62
TCF4-224ENST00000564403 RGPD2P0DJD1 1756 aa11.17□□□□□ -0.62
TCF4-224ENST00000564403 SMARCA5O60264 1052 aaPredicted RBP11.17□□□□□ -0.62
TCF4-224ENST00000564403 MAP2K1Q02750 393 aaPredicted RBP11.17□□□□□ -0.62
TCF4-224ENST00000564403 OTUD7AQ8TE49 926 aaPredicted RBP11.17□□□□□ -0.62
TCF4-224ENST00000564403 PRAMEF22A3QJZ6 481 aa11.16□□□□□ -0.62
TCF4-224ENST00000564403 HTATSF1O43719 755 aaKnown RBP11.16□□□□□ -0.62
TCF4-224ENST00000564403 POLD1P28340 1107 aa11.16□□□□□ -0.62
TCF4-224ENST00000564403 CLCN1P35523 988 aa11.16□□□□□ -0.62
TCF4-224ENST00000564403 FLIIQ13045 1269 aa11.16□□□□□ -0.62
TCF4-224ENST00000564403 STK31Q9BXU1 1019 aa11.16□□□□□ -0.62
TCF4-224ENST00000564403 DNAJC14Q6Y2X3 702 aaPredicted RBP11.16□□□□□ -0.62
TCF4-224ENST00000564403 CEP85Q6P2H3 762 aa11.15□□□□□ -0.62
TCF4-224ENST00000564403 NLRP2Q9NX02 1062 aa11.15□□□□□ -0.62
TCF4-224ENST00000564403 ZBTB12Q9Y330 459 aaPredicted RBP11.15□□□□□ -0.62
TCF4-224ENST00000564403 RTL1A6NKG5 1358 aa11.15□□□□□ -0.62
TCF4-224ENST00000564403 PTPRCP08575 1304 aa11.15□□□□□ -0.62
TCF4-224ENST00000564403 HDGFL1Q5TGJ6 251 aa11.15□□□□□ -0.62
TCF4-224ENST00000564403 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
TCF4-224ENST00000564403 CCDC30Q5VVM6 783 aa11.14□□□□□ -0.63
TCF4-224ENST00000564403 GCC1Q96CN9 775 aa11.14□□□□□ -0.63
TCF4-224ENST00000564403 STRCP1A6NGW2 1772 aa11.14□□□□□ -0.63
TCF4-224ENST00000564403 BTBD11A6QL63 1104 aa11.14□□□□□ -0.63
TCF4-224ENST00000564403 TEFQ10587 303 aa11.14□□□□□ -0.63
TCF4-224ENST00000564403 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
TCF4-224ENST00000564403 PXDNQ92626 1479 aa11.14□□□□□ -0.63
TCF4-224ENST00000564403 MST1RQ04912 1400 aa11.14□□□□□ -0.63
TCF4-224ENST00000564403 EIF4A1P60842 406 aaKnown RBP11.13□□□□□ -0.63
TCF4-224ENST00000564403 PLEKHO1Q53GL0 409 aaPredicted RBP11.13□□□□□ -0.63
TCF4-224ENST00000564403 ANKRD44Q8N8A2 993 aa11.13□□□□□ -0.63
TCF4-224ENST00000564403 NBPF10Q6P3W6 841 aaKnown RBP11.13□□□□□ -0.63
TCF4-224ENST00000564403 RNF217Q8TC41 542 aa11.13□□□□□ -0.63
TCF4-224ENST00000564403 TBC1D32Q96NH3 1257 aa11.13□□□□□ -0.63
TCF4-224ENST00000564403 DCTPP1Q9H773 170 aa11.13□□□□□ -0.63
TCF4-224ENST00000564403 CHPF2Q9P2E5 772 aa11.13□□□□□ -0.63
TCF4-224ENST00000564403 CEMIPQ8WUJ3 1361 aa11.13□□□□□ -0.63
TCF4-224ENST00000564403 ERBB3P21860 1342 aa11.13□□□□□ -0.63
TCF4-224ENST00000564403 ZNF335Q9H4Z2 1342 aaPredicted RBP11.13□□□□□ -0.63
TCF4-224ENST00000564403 ATP10DQ9P241 1426 aa11.13□□□□□ -0.63
TCF4-224ENST00000564403 AKAP4Q5JQC9 854 aa11.12□□□□□ -0.63
TCF4-224ENST00000564403 CSB-PGBD3P0DP91 1061 aa11.12□□□□□ -0.63
TCF4-224ENST00000564403 SLC39A6Q13433 755 aa11.12□□□□□ -0.63
TCF4-224ENST00000564403 C1orf141Q5JVX7 400 aa11.12□□□□□ -0.63
TCF4-224ENST00000564403 RNMTO43148 476 aaKnown RBP11.12□□□□□ -0.63
TCF4-224ENST00000564403 NBPF5PQ86XG9 351 aaPredicted RBP11.12□□□□□ -0.63
TCF4-224ENST00000564403 UPF2Q9HAU5 1272 aaKnown RBP11.12□□□□□ -0.63
TCF4-224ENST00000564403 EXOC6BQ9Y2D4 811 aa11.12□□□□□ -0.63
TCF4-224ENST00000564403 PNMA6EA0A0J9YXQ4 647 aa11.11□□□□□ -0.63
TCF4-224ENST00000564403 LETM1O95202 739 aaPredicted RBP11.11□□□□□ -0.63
TCF4-224ENST00000564403 SATB1Q01826 763 aa11.11□□□□□ -0.63
TCF4-224ENST00000564403 PROSER3Q2NL68 480 aa11.11□□□□□ -0.63
TCF4-224ENST00000564403 TSHZ3Q63HK5 1081 aa11.11□□□□□ -0.63
TCF4-224ENST00000564403 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
TCF4-224ENST00000564403 PLEKHM2Q8IWE5 1019 aa11.11□□□□□ -0.63
TCF4-224ENST00000564403 C22orf23Q9BZE7 217 aa11.11□□□□□ -0.63
TCF4-224ENST00000564403 SLKQ9H2G2 1235 aaPredicted RBP11.11□□□□□ -0.63
TCF4-224ENST00000564403 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
TCF4-224ENST00000564403 MYBPC2Q14324 1141 aa11.1□□□□□ -0.63
TCF4-224ENST00000564403 MED1Q15648 1581 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms