RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 KIAA1551Q9HCM1 1747 aa33.6■■■□□ 2.97
AC009041.3-201ENST00000564390 NEFMP07197 916 aa33.59■■■□□ 2.97
AC009041.3-201ENST00000564390 CANXP27824 592 aaKnown RBP33.59■■■□□ 2.97
AC009041.3-201ENST00000564390 FMNL2Q96PY5 1086 aa33.59■■■□□ 2.97
AC009041.3-201ENST00000564390 PLEKHF1Q96S99 279 aa33.59■■■□□ 2.97
AC009041.3-201ENST00000564390 USPL1Q5W0Q7 1092 aa33.58■■■□□ 2.97
AC009041.3-201ENST00000564390 PARP3Q9Y6F1 533 aa33.58■■■□□ 2.97
AC009041.3-201ENST00000564390 PXDNLA1KZ92 1463 aa33.57■■■□□ 2.97
AC009041.3-201ENST00000564390 MYBBP1AQ9BQG0 1328 aaKnown RBP33.57■■■□□ 2.97
AC009041.3-201ENST00000564390 STARD3NLO95772 234 aa33.57■■■□□ 2.96
AC009041.3-201ENST00000564390 N4BP2Q86UW6 1770 aaPredicted RBP33.57■■■□□ 2.96
AC009041.3-201ENST00000564390 ZPR1O75312 459 aa33.56■■■□□ 2.96
AC009041.3-201ENST00000564390 DDR1Q08345 913 aa33.55■■■□□ 2.96
AC009041.3-201ENST00000564390 HTATSF1O43719 755 aaKnown RBP33.54■■■□□ 2.96
AC009041.3-201ENST00000564390 MAPK8IP3Q9UPT6 1336 aa33.53■■■□□ 2.96
AC009041.3-201ENST00000564390 GRIN3BO60391 1043 aa33.52■■■□□ 2.96
AC009041.3-201ENST00000564390 NARFQ9UHQ1 456 aa33.52■■■□□ 2.96
AC009041.3-201ENST00000564390 NFE2L2Q16236 605 aa33.51■■■□□ 2.95
AC009041.3-201ENST00000564390 TEX13AQ9BXU3 409 aaPredicted RBP33.51■■■□□ 2.95
AC009041.3-201ENST00000564390 ZNF330Q9Y3S2 320 aaPredicted RBP33.51■■■□□ 2.95
AC009041.3-201ENST00000564390 SCN7AQ01118 1682 aa33.5■■■□□ 2.95
AC009041.3-201ENST00000564390 PRAMEF22A3QJZ6 481 aa33.5■■■□□ 2.95
AC009041.3-201ENST00000564390 EIF5P55010 431 aaKnown RBP33.49■■■□□ 2.95
AC009041.3-201ENST00000564390 ZNF784Q8NCA9 323 aaPredicted RBP33.49■■■□□ 2.95
AC009041.3-201ENST00000564390 THUMPD2Q9BTF0 503 aaKnown RBP33.49■■■□□ 2.95
AC009041.3-201ENST00000564390 A1BGP04217 495 aa33.48■■■□□ 2.95
AC009041.3-201ENST00000564390 BCL2L12Q9HB09 334 aa33.48■■■□□ 2.95
AC009041.3-201ENST00000564390 A0A0G2JLW4 131 aa33.47■■■□□ 2.95
AC009041.3-201ENST00000564390 POLRMTO00411 1230 aaKnown RBP33.47■■■□□ 2.95
AC009041.3-201ENST00000564390 PNNQ9H307 717 aaKnown RBP33.47■■■□□ 2.95
AC009041.3-201ENST00000564390 MIS18AQ9NYP9 233 aa33.47■■■□□ 2.95
AC009041.3-201ENST00000564390 KDM3BQ7LBC6 1761 aa33.47■■■□□ 2.95
AC009041.3-201ENST00000564390 TM4SF1P30408 202 aa33.46■■■□□ 2.95
AC009041.3-201ENST00000564390 TGFB2P61812 414 aa33.45■■■□□ 2.95
AC009041.3-201ENST00000564390 NFIXQ14938 502 aa33.45■■■□□ 2.95
AC009041.3-201ENST00000564390 TAF7Q15545 349 aaPredicted RBP33.45■■■□□ 2.95
AC009041.3-201ENST00000564390 USP16Q9Y5T5 823 aa33.45■■■□□ 2.95
AC009041.3-201ENST00000564390 DPEP1P16444 411 aa33.44■■■□□ 2.94
AC009041.3-201ENST00000564390 ZEB1P37275 1124 aaPredicted RBP33.44■■■□□ 2.94
AC009041.3-201ENST00000564390 PIP4K2AP48426 406 aaPredicted RBP33.44■■■□□ 2.94
AC009041.3-201ENST00000564390 AFDNP55196 1824 aaKnown RBP33.44■■■□□ 2.94
AC009041.3-201ENST00000564390 BRCA1P38398 1863 aaKnown RBP33.42■■■□□ 2.94
AC009041.3-201ENST00000564390 A0A087WZG4 1122 aa33.42■■■□□ 2.94
AC009041.3-201ENST00000564390 SNRPA1P09661 255 aaKnown RBP33.42■■■□□ 2.94
AC009041.3-201ENST00000564390 LAMB4A4D0S4 1761 aa33.42■■■□□ 2.94
AC009041.3-201ENST00000564390 IL6STP40189 918 aaPredicted RBP33.41■■■□□ 2.94
AC009041.3-201ENST00000564390 PRKRIP1Q9H875 184 aaPredicted RBP33.41■■■□□ 2.94
AC009041.3-201ENST00000564390 TBC1D2BQ9UPU7 963 aa33.41■■■□□ 2.94
AC009041.3-201ENST00000564390 NRXN2Q9P2S2 1712 aa33.41■■■□□ 2.94
AC009041.3-201ENST00000564390 BCORQ6W2J9 1755 aa33.39■■■□□ 2.94
AC009041.3-201ENST00000564390 BICDL1Q6ZP65 573 aa33.39■■■□□ 2.94
AC009041.3-201ENST00000564390 CCDC146Q8IYE0 955 aa33.39■■■□□ 2.94
AC009041.3-201ENST00000564390 BCS1LQ9Y276 419 aa33.38■■■□□ 2.93
AC009041.3-201ENST00000564390 WDR43Q15061 677 aaKnown RBP eCLIP33.36■■■□□ 2.93
AC009041.3-201ENST00000564390 RIPK4P57078 832 aa33.35■■■□□ 2.93
AC009041.3-201ENST00000564390 TBC1D9BQ66K14 1250 aa33.35■■■□□ 2.93
AC009041.3-201ENST00000564390 NPM2Q86SE8 214 aaKnown RBP33.35■■■□□ 2.93
AC009041.3-201ENST00000564390 PNISRQ8TF01 805 aaKnown RBP33.35■■■□□ 2.93
AC009041.3-201ENST00000564390 RRP7AQ9Y3A4 280 aaKnown RBP33.35■■■□□ 2.93
AC009041.3-201ENST00000564390 SERPINB2P05120 415 aa33.34■■■□□ 2.93
AC009041.3-201ENST00000564390 KCNA3P22001 575 aa33.34■■■□□ 2.93
AC009041.3-201ENST00000564390 CHRNA5P30532 468 aa33.34■■■□□ 2.93
AC009041.3-201ENST00000564390 CAMTA2O94983 1202 aa33.33■■■□□ 2.93
AC009041.3-201ENST00000564390 TMPOP42166 694 aaKnown RBP33.33■■■□□ 2.93
AC009041.3-201ENST00000564390 DZIP3Q86Y13 1208 aaKnown RBP33.33■■■□□ 2.93
AC009041.3-201ENST00000564390 CARMIL3Q8ND23 1372 aa33.33■■■□□ 2.93
AC009041.3-201ENST00000564390 NBPF26B4DH59 902 aa33.31■■■□□ 2.92
AC009041.3-201ENST00000564390 NBPF10Q6P3W6 841 aaKnown RBP33.31■■■□□ 2.92
AC009041.3-201ENST00000564390 NBPF15Q8N660 670 aa33.31■■■□□ 2.92
AC009041.3-201ENST00000564390 EIF4A1P60842 406 aaKnown RBP33.29■■■□□ 2.92
AC009041.3-201ENST00000564390 NEUROD2Q15784 382 aa33.29■■■□□ 2.92
AC009041.3-201ENST00000564390 ADAMTS8Q9UP79 889 aa33.29■■■□□ 2.92
AC009041.3-201ENST00000564390 ARFGEF1Q9Y6D6 1849 aa33.29■■■□□ 2.92
AC009041.3-201ENST00000564390 PIM2Q9P1W9 311 aa33.28■■■□□ 2.92
AC009041.3-201ENST00000564390 ATP10DQ9P241 1426 aa33.28■■■□□ 2.92
AC009041.3-201ENST00000564390 RUNDC1Q96C34 613 aa33.27■■■□□ 2.92
AC009041.3-201ENST00000564390 DLEC1Q9Y238 1755 aa33.26■■■□□ 2.92
AC009041.3-201ENST00000564390 ADCY9O60503 1353 aa33.26■■■□□ 2.92
AC009041.3-201ENST00000564390 GIGYF1O75420 1035 aaPredicted RBP33.26■■■□□ 2.91
AC009041.3-201ENST00000564390 LMOD3Q0VAK6 560 aa33.26■■■□□ 2.91
AC009041.3-201ENST00000564390 TSPYL4Q9UJ04 414 aa33.26■■■□□ 2.91
AC009041.3-201ENST00000564390 ANKRD31Q8N7Z5 1873 aa33.26■■■□□ 2.91
AC009041.3-201ENST00000564390 DALRD3Q5D0E6 543 aaKnown RBP33.24■■■□□ 2.91
AC009041.3-201ENST00000564390 CCDC24Q8N4L8 307 aa33.24■■■□□ 2.91
AC009041.3-201ENST00000564390 ARHGAP27Q6ZUM4 889 aa33.23■■■□□ 2.91
AC009041.3-201ENST00000564390 PRR5LQ6MZQ0 368 aa33.21■■■□□ 2.91
AC009041.3-201ENST00000564390 SETDB2Q96T68 719 aa33.21■■■□□ 2.91
AC009041.3-201ENST00000564390 COL11A2P13942 1736 aaPredicted RBP33.21■■■□□ 2.91
AC009041.3-201ENST00000564390 NGEFQ8N5V2 710 aa33.2■■■□□ 2.91
AC009041.3-201ENST00000564390 C2CD5Q86YS7 1000 aa33.19■■■□□ 2.9
AC009041.3-201ENST00000564390 TRIM35Q9UPQ4 493 aa33.19■■■□□ 2.9
AC009041.3-201ENST00000564390 ZNF526Q8TF50 670 aaPredicted RBP33.18■■■□□ 2.9
AC009041.3-201ENST00000564390 ZNF316A6NFI3 1004 aaPredicted RBP33.17■■■□□ 2.9
AC009041.3-201ENST00000564390 CNBD1Q8NA66 436 aa33.17■■■□□ 2.9
AC009041.3-201ENST00000564390 ZNF652Q9Y2D9 606 aa33.17■■■□□ 2.9
AC009041.3-201ENST00000564390 NPHP1O15259 732 aa33.16■■■□□ 2.9
AC009041.3-201ENST00000564390 MYL6BP14649 208 aa33.16■■■□□ 2.9
AC009041.3-201ENST00000564390 CLEC4GQ6UXB4 293 aa33.15■■■□□ 2.9
AC009041.3-201ENST00000564390 HLFQ16534 295 aa33.14■■■□□ 2.9
AC009041.3-201ENST00000564390 LAS1LQ9Y4W2 734 aaKnown RBP33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms