RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 FMNL2Q96PY5 1086 aa26.53■■□□□ 1.84
SHCBP1-203ENST00000564272 STARD3NLO95772 234 aa26.52■■□□□ 1.84
SHCBP1-203ENST00000564272 NEFMP07197 916 aa26.52■■□□□ 1.84
SHCBP1-203ENST00000564272 CANXP27824 592 aaKnown RBP26.52■■□□□ 1.84
SHCBP1-203ENST00000564272 USPL1Q5W0Q7 1092 aa26.52■■□□□ 1.84
SHCBP1-203ENST00000564272 MYBBP1AQ9BQG0 1328 aaKnown RBP26.52■■□□□ 1.84
SHCBP1-203ENST00000564272 KIAA1551Q9HCM1 1747 aa26.52■■□□□ 1.84
SHCBP1-203ENST00000564272 PARP3Q9Y6F1 533 aa26.52■■□□□ 1.84
SHCBP1-203ENST00000564272 PXDNLA1KZ92 1463 aa26.51■■□□□ 1.83
SHCBP1-203ENST00000564272 HTATSF1O43719 755 aaKnown RBP26.51■■□□□ 1.83
SHCBP1-203ENST00000564272 ZPR1O75312 459 aa26.51■■□□□ 1.83
SHCBP1-203ENST00000564272 DDR1Q08345 913 aa26.5■■□□□ 1.83
SHCBP1-203ENST00000564272 GOLGB1Q14789 3259 aaKnown RBP26.5■■□□□ 1.83
SHCBP1-203ENST00000564272 N4BP2Q86UW6 1770 aaPredicted RBP26.49■■□□□ 1.83
SHCBP1-203ENST00000564272 GRIN3BO60391 1043 aa26.48■■□□□ 1.83
SHCBP1-203ENST00000564272 TEX13AQ9BXU3 409 aaPredicted RBP26.48■■□□□ 1.83
SHCBP1-203ENST00000564272 NARFQ9UHQ1 456 aa26.48■■□□□ 1.83
SHCBP1-203ENST00000564272 MAPK8IP3Q9UPT6 1336 aa26.47■■□□□ 1.83
SHCBP1-203ENST00000564272 NFE2L2Q16236 605 aa26.47■■□□□ 1.83
SHCBP1-203ENST00000564272 EIF5P55010 431 aaKnown RBP26.46■■□□□ 1.83
SHCBP1-203ENST00000564272 PRAMEF22A3QJZ6 481 aa26.45■■□□□ 1.82
SHCBP1-203ENST00000564272 PNNQ9H307 717 aaKnown RBP26.45■■□□□ 1.82
SHCBP1-203ENST00000564272 BCL2L12Q9HB09 334 aa26.45■■□□□ 1.82
SHCBP1-203ENST00000564272 POLRMTO00411 1230 aaKnown RBP26.44■■□□□ 1.82
SHCBP1-203ENST00000564272 A1BGP04217 495 aa26.44■■□□□ 1.82
SHCBP1-203ENST00000564272 ZEB1P37275 1124 aaPredicted RBP26.44■■□□□ 1.82
SHCBP1-203ENST00000564272 ZNF784Q8NCA9 323 aaPredicted RBP26.44■■□□□ 1.82
SHCBP1-203ENST00000564272 THUMPD2Q9BTF0 503 aaKnown RBP26.44■■□□□ 1.82
SHCBP1-203ENST00000564272 ZNF330Q9Y3S2 320 aaPredicted RBP26.44■■□□□ 1.82
SHCBP1-203ENST00000564272 SCN7AQ01118 1682 aa26.44■■□□□ 1.82
SHCBP1-203ENST00000564272 TM4SF1P30408 202 aa26.43■■□□□ 1.82
SHCBP1-203ENST00000564272 TAF7Q15545 349 aaPredicted RBP26.43■■□□□ 1.82
SHCBP1-203ENST00000564272 MIS18AQ9NYP9 233 aa26.43■■□□□ 1.82
SHCBP1-203ENST00000564272 A0A0G2JLW4 131 aa26.42■■□□□ 1.82
SHCBP1-203ENST00000564272 TGFB2P61812 414 aa26.42■■□□□ 1.82
SHCBP1-203ENST00000564272 NFIXQ14938 502 aa26.42■■□□□ 1.82
SHCBP1-203ENST00000564272 USP16Q9Y5T5 823 aa26.42■■□□□ 1.82
SHCBP1-203ENST00000564272 KDM3BQ7LBC6 1761 aa26.42■■□□□ 1.82
SHCBP1-203ENST00000564272 A0A087WZG4 1122 aa26.41■■□□□ 1.82
SHCBP1-203ENST00000564272 DPEP1P16444 411 aa26.41■■□□□ 1.82
SHCBP1-203ENST00000564272 AFDNP55196 1824 aaKnown RBP26.4■■□□□ 1.82
SHCBP1-203ENST00000564272 SNRPA1P09661 255 aaKnown RBP26.4■■□□□ 1.82
SHCBP1-203ENST00000564272 IL6STP40189 918 aaPredicted RBP26.4■■□□□ 1.82
SHCBP1-203ENST00000564272 PIP4K2AP48426 406 aaPredicted RBP26.4■■□□□ 1.82
SHCBP1-203ENST00000564272 PRKRIP1Q9H875 184 aaPredicted RBP26.4■■□□□ 1.82
SHCBP1-203ENST00000564272 TBC1D2BQ9UPU7 963 aa26.39■■□□□ 1.82
SHCBP1-203ENST00000564272 BRCA1P38398 1863 aaKnown RBP26.38■■□□□ 1.81
SHCBP1-203ENST00000564272 NRXN2Q9P2S2 1712 aa26.38■■□□□ 1.81
SHCBP1-203ENST00000564272 LAMB4A4D0S4 1761 aa26.38■■□□□ 1.81
SHCBP1-203ENST00000564272 CCDC146Q8IYE0 955 aa26.37■■□□□ 1.81
SHCBP1-203ENST00000564272 BCORQ6W2J9 1755 aa26.36■■□□□ 1.81
SHCBP1-203ENST00000564272 BICDL1Q6ZP65 573 aa26.36■■□□□ 1.81
SHCBP1-203ENST00000564272 RIPK4P57078 832 aa26.35■■□□□ 1.81
SHCBP1-203ENST00000564272 WDR43Q15061 677 aaKnown RBP eCLIP26.35■■□□□ 1.81
SHCBP1-203ENST00000564272 PNISRQ8TF01 805 aaKnown RBP26.35■■□□□ 1.81
SHCBP1-203ENST00000564272 BCS1LQ9Y276 419 aa26.35■■□□□ 1.81
SHCBP1-203ENST00000564272 KCNA3P22001 575 aa26.34■■□□□ 1.81
SHCBP1-203ENST00000564272 TBC1D9BQ66K14 1250 aa26.34■■□□□ 1.81
SHCBP1-203ENST00000564272 NPM2Q86SE8 214 aaKnown RBP26.34■■□□□ 1.81
SHCBP1-203ENST00000564272 CAMTA2O94983 1202 aa26.33■■□□□ 1.81
SHCBP1-203ENST00000564272 SERPINB2P05120 415 aa26.33■■□□□ 1.81
SHCBP1-203ENST00000564272 CHRNA5P30532 468 aa26.33■■□□□ 1.81
SHCBP1-203ENST00000564272 TMPOP42166 694 aaKnown RBP26.33■■□□□ 1.81
SHCBP1-203ENST00000564272 RRP7AQ9Y3A4 280 aaKnown RBP26.33■■□□□ 1.81
SHCBP1-203ENST00000564272 DZIP3Q86Y13 1208 aaKnown RBP26.32■■□□□ 1.8
SHCBP1-203ENST00000564272 CARMIL3Q8ND23 1372 aa26.32■■□□□ 1.8
SHCBP1-203ENST00000564272 NBPF26B4DH59 902 aa26.31■■□□□ 1.8
SHCBP1-203ENST00000564272 NBPF10Q6P3W6 841 aaKnown RBP26.31■■□□□ 1.8
SHCBP1-203ENST00000564272 NBPF15Q8N660 670 aa26.31■■□□□ 1.8
SHCBP1-203ENST00000564272 EIF4A1P60842 406 aaKnown RBP26.3■■□□□ 1.8
SHCBP1-203ENST00000564272 ADAMTS8Q9UP79 889 aa26.3■■□□□ 1.8
SHCBP1-203ENST00000564272 ARFGEF1Q9Y6D6 1849 aa26.28■■□□□ 1.8
SHCBP1-203ENST00000564272 GIGYF1O75420 1035 aaPredicted RBP26.28■■□□□ 1.8
SHCBP1-203ENST00000564272 NEUROD2Q15784 382 aa26.28■■□□□ 1.8
SHCBP1-203ENST00000564272 RUNDC1Q96C34 613 aa26.28■■□□□ 1.8
SHCBP1-203ENST00000564272 PIM2Q9P1W9 311 aa26.28■■□□□ 1.8
SHCBP1-203ENST00000564272 LMOD3Q0VAK6 560 aa26.27■■□□□ 1.8
SHCBP1-203ENST00000564272 TSPYL4Q9UJ04 414 aa26.27■■□□□ 1.8
SHCBP1-203ENST00000564272 ADCY9O60503 1353 aa26.27■■□□□ 1.8
SHCBP1-203ENST00000564272 ATP10DQ9P241 1426 aa26.27■■□□□ 1.8
SHCBP1-203ENST00000564272 DLEC1Q9Y238 1755 aa26.25■■□□□ 1.79
SHCBP1-203ENST00000564272 ANKRD31Q8N7Z5 1873 aa26.25■■□□□ 1.79
SHCBP1-203ENST00000564272 DALRD3Q5D0E6 543 aaKnown RBP26.24■■□□□ 1.79
SHCBP1-203ENST00000564272 PRR5LQ6MZQ0 368 aa26.23■■□□□ 1.79
SHCBP1-203ENST00000564272 ARHGAP27Q6ZUM4 889 aa26.23■■□□□ 1.79
SHCBP1-203ENST00000564272 CCDC24Q8N4L8 307 aa26.23■■□□□ 1.79
SHCBP1-203ENST00000564272 SETDB2Q96T68 719 aa26.23■■□□□ 1.79
SHCBP1-203ENST00000564272 TRIM35Q9UPQ4 493 aa26.22■■□□□ 1.79
SHCBP1-203ENST00000564272 ZNF316A6NFI3 1004 aaPredicted RBP26.21■■□□□ 1.79
SHCBP1-203ENST00000564272 C2CD5Q86YS7 1000 aa26.21■■□□□ 1.79
SHCBP1-203ENST00000564272 COL11A2P13942 1736 aaPredicted RBP26.2■■□□□ 1.79
SHCBP1-203ENST00000564272 CLEC4GQ6UXB4 293 aa26.2■■□□□ 1.78
SHCBP1-203ENST00000564272 NGEFQ8N5V2 710 aa26.2■■□□□ 1.78
SHCBP1-203ENST00000564272 ZNF652Q9Y2D9 606 aa26.2■■□□□ 1.78
SHCBP1-203ENST00000564272 CNBD1Q8NA66 436 aa26.19■■□□□ 1.78
SHCBP1-203ENST00000564272 BABAM1Q9NWV8 329 aa26.19■■□□□ 1.78
SHCBP1-203ENST00000564272 MYL6BP14649 208 aa26.18■■□□□ 1.78
SHCBP1-203ENST00000564272 NPHP1O15259 732 aa26.17■■□□□ 1.78
SHCBP1-203ENST00000564272 ZNF526Q8TF50 670 aaPredicted RBP26.17■■□□□ 1.78
SHCBP1-203ENST00000564272 BRIP1Q9BX63 1249 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms