RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 POLRMTO00411 1230 aaKnown RBP32.11■■■□□ 2.73
NME3-206ENST00000564252 FCHSD2O94868 740 aa32.1■■■□□ 2.73
NME3-206ENST00000564252 NARFQ9UHQ1 456 aa32.09■■■□□ 2.73
NME3-206ENST00000564252 CEP350Q5VT06 3117 aa32.09■■■□□ 2.73
NME3-206ENST00000564252 ARFGEF1Q9Y6D6 1849 aa32.09■■■□□ 2.73
NME3-206ENST00000564252 TTC5Q8N0Z6 440 aa32.08■■■□□ 2.73
NME3-206ENST00000564252 TEFQ10587 303 aa32.07■■■□□ 2.72
NME3-206ENST00000564252 CFAP53Q96M91 514 aa32.07■■■□□ 2.72
NME3-206ENST00000564252 PHACTR3Q96KR7 559 aa32.06■■■□□ 2.72
NME3-206ENST00000564252 RSPH6AQ9H0K4 717 aa32.06■■■□□ 2.72
NME3-206ENST00000564252 PIM2Q9P1W9 311 aa32.06■■■□□ 2.72
NME3-206ENST00000564252 ZNF790Q6PG37 636 aa32.05■■■□□ 2.72
NME3-206ENST00000564252 ARHGAP27Q6ZUM4 889 aa32.05■■■□□ 2.72
NME3-206ENST00000564252 ZNF496Q96IT1 587 aaPredicted RBP32.05■■■□□ 2.72
NME3-206ENST00000564252 BCL2L12Q9HB09 334 aa32.05■■■□□ 2.72
NME3-206ENST00000564252 CEMIPQ8WUJ3 1361 aa32.05■■■□□ 2.72
NME3-206ENST00000564252 PRKAR2BP31323 418 aa32.04■■■□□ 2.72
NME3-206ENST00000564252 AFDNP55196 1824 aaKnown RBP32.04■■■□□ 2.72
NME3-206ENST00000564252 NRXN2Q9P2S2 1712 aa32.03■■■□□ 2.72
NME3-206ENST00000564252 STARD3NLO95772 234 aa32.03■■■□□ 2.72
NME3-206ENST00000564252 CANXP27824 592 aaKnown RBP32.03■■■□□ 2.72
NME3-206ENST00000564252 PPP2R1AP30153 589 aa32.03■■■□□ 2.72
NME3-206ENST00000564252 NFIXQ14938 502 aa32.03■■■□□ 2.72
NME3-206ENST00000564252 HEG1Q9ULI3 1381 aa32.03■■■□□ 2.72
NME3-206ENST00000564252 CHRNA5P30532 468 aa32.02■■■□□ 2.72
NME3-206ENST00000564252 EIF5P55010 431 aaKnown RBP32.01■■■□□ 2.71
NME3-206ENST00000564252 DALRD3Q5D0E6 543 aaKnown RBP32.01■■■□□ 2.71
NME3-206ENST00000564252 NUDCQ9Y266 331 aa32■■■□□ 2.71
NME3-206ENST00000564252 KIF3CO14782 793 aa31.98■■■□□ 2.71
NME3-206ENST00000564252 TEX13AQ9BXU3 409 aaPredicted RBP31.98■■■□□ 2.71
NME3-206ENST00000564252 FMNL2Q96PY5 1086 aa31.96■■■□□ 2.71
NME3-206ENST00000564252 A0A087WZG4 1122 aa31.95■■■□□ 2.71
NME3-206ENST00000564252 SERPINB2P05120 415 aa31.95■■■□□ 2.71
NME3-206ENST00000564252 U2AF1L5P0DN76 240 aaPredicted RBP31.95■■■□□ 2.71
NME3-206ENST00000564252 U2AF1Q01081 240 aaKnown RBP eCLIP31.95■■■□□ 2.71
NME3-206ENST00000564252 SCN7AQ01118 1682 aa31.95■■■□□ 2.7
NME3-206ENST00000564252 BTBD11A6QL63 1104 aa31.93■■■□□ 2.7
NME3-206ENST00000564252 KCNQ3O43525 872 aa31.93■■■□□ 2.7
NME3-206ENST00000564252 C9orf131Q5VYM1 1079 aa31.93■■■□□ 2.7
NME3-206ENST00000564252 DLEC1Q9Y238 1755 aa31.92■■■□□ 2.7
NME3-206ENST00000564252 IL6STP40189 918 aaPredicted RBP31.9■■■□□ 2.7
NME3-206ENST00000564252 CARMIL3Q8ND23 1372 aa31.9■■■□□ 2.7
NME3-206ENST00000564252 A1BGP04217 495 aa31.89■■■□□ 2.7
NME3-206ENST00000564252 HSPA6P17066 643 aa31.89■■■□□ 2.7
NME3-206ENST00000564252 BICDL1Q6ZP65 573 aa31.89■■■□□ 2.7
NME3-206ENST00000564252 TBC1D9BQ66K14 1250 aa31.88■■■□□ 2.69
NME3-206ENST00000564252 TBC1D2BQ9UPU7 963 aa31.88■■■□□ 2.69
NME3-206ENST00000564252 ZNF330Q9Y3S2 320 aaPredicted RBP31.88■■■□□ 2.69
NME3-206ENST00000564252 MCM10Q7L590 875 aa31.87■■■□□ 2.69
NME3-206ENST00000564252 RTF1Q92541 710 aaKnown RBP31.87■■■□□ 2.69
NME3-206ENST00000564252 SBF1O95248 1867 aa31.86■■■□□ 2.69
NME3-206ENST00000564252 RNF181Q9P0P0 153 aa31.85■■■□□ 2.69
NME3-206ENST00000564252 NMRK2Q9NPI5 230 aa31.84■■■□□ 2.69
NME3-206ENST00000564252 ANKRD31Q8N7Z5 1873 aa31.84■■■□□ 2.69
NME3-206ENST00000564252 DCTN1Q14203 1278 aa31.83■■■□□ 2.69
NME3-206ENST00000564252 C2CD5Q86YS7 1000 aa31.83■■■□□ 2.69
NME3-206ENST00000564252 USP16Q9Y5T5 823 aa31.83■■■□□ 2.69
NME3-206ENST00000564252 BCORQ6W2J9 1755 aa31.83■■■□□ 2.69
NME3-206ENST00000564252 HTATSF1O43719 755 aaKnown RBP31.82■■■□□ 2.68
NME3-206ENST00000564252 PRAMEF22A3QJZ6 481 aa31.81■■■□□ 2.68
NME3-206ENST00000564252 H0YIN7 160 aa31.81■■■□□ 2.68
NME3-206ENST00000564252 CAMTA2O94983 1202 aa31.81■■■□□ 2.68
NME3-206ENST00000564252 TTLL6Q8N841 843 aa31.81■■■□□ 2.68
NME3-206ENST00000564252 TOMM70O94826 608 aa31.8■■■□□ 2.68
NME3-206ENST00000564252 RASSF7Q02833 373 aa31.79■■■□□ 2.68
NME3-206ENST00000564252 PRR5LQ6MZQ0 368 aa31.79■■■□□ 2.68
NME3-206ENST00000564252 NPM2Q86SE8 214 aaKnown RBP31.79■■■□□ 2.68
NME3-206ENST00000564252 SNRPA1P09661 255 aaKnown RBP31.78■■■□□ 2.68
NME3-206ENST00000564252 PIP4K2AP48426 406 aaPredicted RBP31.78■■■□□ 2.68
NME3-206ENST00000564252 DZIP3Q86Y13 1208 aaKnown RBP31.77■■■□□ 2.68
NME3-206ENST00000564252 BRIP1Q9BX63 1249 aa31.77■■■□□ 2.68
NME3-206ENST00000564252 COL11A2P13942 1736 aaPredicted RBP31.77■■■□□ 2.68
NME3-206ENST00000564252 CCDC24Q8N4L8 307 aa31.75■■■□□ 2.67
NME3-206ENST00000564252 SETDB2Q96T68 719 aa31.75■■■□□ 2.67
NME3-206ENST00000564252 DLG5Q8TDM6 1919 aa31.75■■■□□ 2.67
NME3-206ENST00000564252 KDM2BQ8NHM5 1336 aa31.75■■■□□ 2.67
NME3-206ENST00000564252 PDE6BP35913 854 aa31.74■■■□□ 2.67
NME3-206ENST00000564252 PRELPP51888 382 aa31.74■■■□□ 2.67
NME3-206ENST00000564252 PDZRN3Q9UPQ7 1066 aa31.74■■■□□ 2.67
NME3-206ENST00000564252 TAF7Q15545 349 aaPredicted RBP31.73■■■□□ 2.67
NME3-206ENST00000564252 LMNB1P20700 586 aa31.72■■■□□ 2.67
NME3-206ENST00000564252 CNBD1Q8NA66 436 aa31.72■■■□□ 2.67
NME3-206ENST00000564252 ZC3H4Q9UPT8 1303 aaKnown RBP31.72■■■□□ 2.67
NME3-206ENST00000564252 TNRC6CQ9HCJ0 1690 aaKnown RBP31.71■■■□□ 2.67
NME3-206ENST00000564252 ZNF622Q969S3 477 aaKnown RBP eCLIP31.71■■■□□ 2.67
NME3-206ENST00000564252 PLEKHF1Q96S99 279 aa31.71■■■□□ 2.67
NME3-206ENST00000564252 NBPF26B4DH59 902 aa31.7■■■□□ 2.67
NME3-206ENST00000564252 NFKBIEO00221 500 aa31.7■■■□□ 2.67
NME3-206ENST00000564252 NBPF10Q6P3W6 841 aaKnown RBP31.7■■■□□ 2.67
NME3-206ENST00000564252 NBPF15Q8N660 670 aa31.7■■■□□ 2.67
NME3-206ENST00000564252 MIS18AQ9NYP9 233 aa31.7■■■□□ 2.67
NME3-206ENST00000564252 NEFMP07197 916 aa31.69■■■□□ 2.66
NME3-206ENST00000564252 CLEC4GQ6UXB4 293 aa31.69■■■□□ 2.66
NME3-206ENST00000564252 RBM46Q8TBY0 533 aaKnown RBP31.69■■■□□ 2.66
NME3-206ENST00000564252 LAMB4A4D0S4 1761 aa31.68■■■□□ 2.66
NME3-206ENST00000564252 KDM3BQ7LBC6 1761 aa31.68■■■□□ 2.66
NME3-206ENST00000564252 CCDC88AQ3V6T2 1871 aa31.68■■■□□ 2.66
NME3-206ENST00000564252 TIAM2Q8IVF5 1701 aa31.67■■■□□ 2.66
NME3-206ENST00000564252 APLP1P51693 650 aa31.67■■■□□ 2.66
NME3-206ENST00000564252 C16orf71Q8IYS4 520 aaPredicted RBP31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms