RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 KIF3BO15066 747 aa11.72□□□□□ -0.53
SMG1-209ENST00000563836 ST8SIA5O15466 376 aa11.72□□□□□ -0.53
SMG1-209ENST00000563836 GIGYF1O75420 1035 aaPredicted RBP11.72□□□□□ -0.53
SMG1-209ENST00000563836 CEP126Q9P2H0 1117 aa11.72□□□□□ -0.53
SMG1-209ENST00000563836 EMILIN1Q9Y6C2 1016 aa11.72□□□□□ -0.53
SMG1-209ENST00000563836 UNC13BO14795 1591 aa11.71□□□□□ -0.53
SMG1-209ENST00000563836 KDM5DQ9BY66 1539 aa11.71□□□□□ -0.53
SMG1-209ENST00000563836 PPP1R26Q5T8A7 1209 aaPredicted RBP11.71□□□□□ -0.53
SMG1-209ENST00000563836 ITPKCQ96DU7 683 aa11.71□□□□□ -0.53
SMG1-209ENST00000563836 CCDC125Q86Z20 511 aa11.7□□□□□ -0.54
SMG1-209ENST00000563836 ZMYM4Q5VZL5 1548 aa11.7□□□□□ -0.54
SMG1-209ENST00000563836 IQGAP3Q86VI3 1631 aa11.69□□□□□ -0.54
SMG1-209ENST00000563836 CAPN5O15484 640 aaPredicted RBP11.69□□□□□ -0.54
SMG1-209ENST00000563836 ZIC2O95409 532 aaPredicted RBP11.69□□□□□ -0.54
SMG1-209ENST00000563836 RNF20Q5VTR2 975 aa11.69□□□□□ -0.54
SMG1-209ENST00000563836 FAM135AQ9P2D6 1515 aa11.69□□□□□ -0.54
SMG1-209ENST00000563836 ERVH48-1M5A8F1 160 aa11.68□□□□□ -0.54
SMG1-209ENST00000563836 SEMA3FQ13275 785 aa11.68□□□□□ -0.54
SMG1-209ENST00000563836 ESF1Q9H501 851 aaKnown RBP11.68□□□□□ -0.54
SMG1-209ENST00000563836 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
SMG1-209ENST00000563836 PGPEP1Q9NXJ5 209 aa11.68□□□□□ -0.54
SMG1-209ENST00000563836 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
SMG1-209ENST00000563836 POM121CA8CG34 1229 aa11.67□□□□□ -0.54
SMG1-209ENST00000563836 RAB15P59190 212 aa11.67□□□□□ -0.54
SMG1-209ENST00000563836 ALG2Q9H553 416 aa11.67□□□□□ -0.54
SMG1-209ENST00000563836 ATP10AO60312 1499 aa11.67□□□□□ -0.54
SMG1-209ENST00000563836 DIP2CQ9Y2E4 1556 aa11.67□□□□□ -0.54
SMG1-209ENST00000563836 PZPP20742 1482 aa11.66□□□□□ -0.54
SMG1-209ENST00000563836 GGT6Q6P531 493 aa11.66□□□□□ -0.54
SMG1-209ENST00000563836 PHTF2Q8N3S3 785 aa11.66□□□□□ -0.54
SMG1-209ENST00000563836 DACH1Q9UI36 760 aa11.66□□□□□ -0.54
SMG1-209ENST00000563836 DEPDC5O75140 1603 aa11.66□□□□□ -0.54
SMG1-209ENST00000563836 TMPRSS4Q9NRS4 437 aa11.65□□□□□ -0.54
SMG1-209ENST00000563836 WASHC2CQ9Y4E1 1318 aa11.64□□□□□ -0.55
SMG1-209ENST00000563836 BCORL1Q5H9F3 1711 aa11.64□□□□□ -0.55
SMG1-209ENST00000563836 FRMPD1Q5SYB0 1578 aa11.64□□□□□ -0.55
SMG1-209ENST00000563836 SIN3AQ96ST3 1273 aa11.64□□□□□ -0.55
SMG1-209ENST00000563836 TET3O43151 1660 aa11.64□□□□□ -0.55
SMG1-209ENST00000563836 RNF17Q9BXT8 1623 aaKnown RBP11.64□□□□□ -0.55
SMG1-209ENST00000563836 Q6ZVU0 165 aa11.63□□□□□ -0.55
SMG1-209ENST00000563836 ZNF784Q8NCA9 323 aaPredicted RBP11.63□□□□□ -0.55
SMG1-209ENST00000563836 ADAMTS19Q8TE59 1207 aa11.63□□□□□ -0.55
SMG1-209ENST00000563836 ATP13A2Q9NQ11 1180 aa11.63□□□□□ -0.55
SMG1-209ENST00000563836 PRDM15P57071 1507 aaPredicted RBP11.63□□□□□ -0.55
SMG1-209ENST00000563836 REREQ9P2R6 1566 aa11.62□□□□□ -0.55
SMG1-209ENST00000563836 ARID4BQ4LE39 1312 aaPredicted RBP11.62□□□□□ -0.55
SMG1-209ENST00000563836 ZC3H13Q5T200 1668 aaKnown RBP11.62□□□□□ -0.55
SMG1-209ENST00000563836 CCDC144AA2RUR9 1427 aa11.62□□□□□ -0.55
SMG1-209ENST00000563836 ARHGEF40Q8TER5 1519 aa11.62□□□□□ -0.55
SMG1-209ENST00000563836 TRAK2O60296 914 aa11.62□□□□□ -0.55
SMG1-209ENST00000563836 SLFNL1Q499Z3 407 aa11.62□□□□□ -0.55
SMG1-209ENST00000563836 MEIOBQ8N635 442 aa11.62□□□□□ -0.55
SMG1-209ENST00000563836 ZMYND15Q9H091 742 aa11.62□□□□□ -0.55
SMG1-209ENST00000563836 LILRA1O75019 489 aa11.61□□□□□ -0.55
SMG1-209ENST00000563836 TRIM46Q7Z4K8 759 aa11.61□□□□□ -0.55
SMG1-209ENST00000563836 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
SMG1-209ENST00000563836 ANKRD30BQ9BXX2 1392 aa11.61□□□□□ -0.55
SMG1-209ENST00000563836 YEATS2Q9ULM3 1422 aa11.6□□□□□ -0.55
SMG1-209ENST00000563836 CBLBQ13191 982 aa11.6□□□□□ -0.55
SMG1-209ENST00000563836 RNF135Q8IUD6 432 aa11.6□□□□□ -0.55
SMG1-209ENST00000563836 BMP1P13497 986 aa11.59□□□□□ -0.55
SMG1-209ENST00000563836 ERVK-9P63128 1117 aa11.59□□□□□ -0.55
SMG1-209ENST00000563836 HDGFL1Q5TGJ6 251 aa11.59□□□□□ -0.55
SMG1-209ENST00000563836 MRPL14Q6P1L8 145 aaKnown RBP11.59□□□□□ -0.55
SMG1-209ENST00000563836 PCDHB11Q9Y5F2 797 aa11.59□□□□□ -0.55
SMG1-209ENST00000563836 CEP152O94986 1710 aa11.59□□□□□ -0.55
SMG1-209ENST00000563836 AGLP35573 1532 aa11.59□□□□□ -0.55
SMG1-209ENST00000563836 RPRD2Q5VT52 1461 aaKnown RBP11.58□□□□□ -0.56
SMG1-209ENST00000563836 SPHKAPQ2M3C7 1700 aa11.58□□□□□ -0.56
SMG1-209ENST00000563836 ADD1P35611 737 aaKnown RBP11.58□□□□□ -0.56
SMG1-209ENST00000563836 LMTK2Q8IWU2 1503 aa11.57□□□□□ -0.56
SMG1-209ENST00000563836 E9PCH4 1651 aa11.57□□□□□ -0.56
SMG1-209ENST00000563836 TSGA10IPQ3SY00 556 aa11.57□□□□□ -0.56
SMG1-209ENST00000563836 GLMNQ92990 594 aa11.57□□□□□ -0.56
SMG1-209ENST00000563836 CYLDQ9NQC7 956 aa11.57□□□□□ -0.56
SMG1-209ENST00000563836 PIK3CDO00329 1044 aa11.56□□□□□ -0.56
SMG1-209ENST00000563836 CC2D2BQ6DHV5 1058 aa11.56□□□□□ -0.56
SMG1-209ENST00000563836 VWDEQ8N2E2 1590 aa11.56□□□□□ -0.56
SMG1-209ENST00000563836 TSEN34Q9BSV6 310 aaKnown RBP11.56□□□□□ -0.56
SMG1-209ENST00000563836 CDCA7Q9BWT1 371 aaPredicted RBP11.56□□□□□ -0.56
SMG1-209ENST00000563836 GMPR2Q9P2T1 348 aaKnown RBP11.56□□□□□ -0.56
SMG1-209ENST00000563836 EFCAB6Q5THR3 1501 aa11.55□□□□□ -0.56
SMG1-209ENST00000563836 SCTRP47872 440 aa11.55□□□□□ -0.56
SMG1-209ENST00000563836 MLECQ14165 292 aa11.55□□□□□ -0.56
SMG1-209ENST00000563836 MAP7D1Q3KQU3 841 aa11.55□□□□□ -0.56
SMG1-209ENST00000563836 LINC00528Q8N1L1 170 aa11.55□□□□□ -0.56
SMG1-209ENST00000563836 PLPP7Q8NBV4 271 aa11.55□□□□□ -0.56
SMG1-209ENST00000563836 NFATC2IPQ8NCF5 419 aa11.55□□□□□ -0.56
SMG1-209ENST00000563836 DOLKQ9UPQ8 538 aa11.55□□□□□ -0.56
SMG1-209ENST00000563836 CAMSAP1Q5T5Y3 1602 aa11.55□□□□□ -0.56
SMG1-209ENST00000563836 KIF1BO60333 1816 aa11.55□□□□□ -0.56
SMG1-209ENST00000563836 MROH1Q8NDA8 1641 aa11.54□□□□□ -0.56
SMG1-209ENST00000563836 PPP1R15AO75807 674 aaPredicted RBP11.54□□□□□ -0.56
SMG1-209ENST00000563836 ADH1AP07327 375 aa11.54□□□□□ -0.56
SMG1-209ENST00000563836 ZFP42Q96MM3 310 aa11.54□□□□□ -0.56
SMG1-209ENST00000563836 UCN2Q96RP3 112 aa11.54□□□□□ -0.56
SMG1-209ENST00000563836 SENP2Q9HC62 589 aa11.54□□□□□ -0.56
SMG1-209ENST00000563836 COL17A1Q9UMD9 1497 aaPredicted RBP11.54□□□□□ -0.56
SMG1-209ENST00000563836 CFAP65Q6ZU64 1925 aaKnown RBP11.54□□□□□ -0.56
SMG1-209ENST00000563836 POTECB2RU33 542 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms