RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 NARFQ9UHQ1 456 aa33.61■■■□□ 2.97
SPG7-208ENST00000563783 ARFGEF1Q9Y6D6 1849 aa33.6■■■□□ 2.97
SPG7-208ENST00000563783 HTATSF1O43719 755 aaKnown RBP33.59■■■□□ 2.97
SPG7-208ENST00000563783 ZBTB1Q9Y2K1 713 aa33.59■■■□□ 2.97
SPG7-208ENST00000563783 NRXN2Q9P2S2 1712 aa33.59■■■□□ 2.97
SPG7-208ENST00000563783 ADCY9O60503 1353 aa33.59■■■□□ 2.97
SPG7-208ENST00000563783 TM4SF1P30408 202 aa33.58■■■□□ 2.97
SPG7-208ENST00000563783 ZNF496Q96IT1 587 aaPredicted RBP33.58■■■□□ 2.97
SPG7-208ENST00000563783 FMNL2Q96PY5 1086 aa33.57■■■□□ 2.96
SPG7-208ENST00000563783 DDR1Q08345 913 aa33.56■■■□□ 2.96
SPG7-208ENST00000563783 AFDNP55196 1824 aaKnown RBP33.56■■■□□ 2.96
SPG7-208ENST00000563783 A0A087WZG4 1122 aa33.54■■■□□ 2.96
SPG7-208ENST00000563783 POLRMTO00411 1230 aaKnown RBP33.54■■■□□ 2.96
SPG7-208ENST00000563783 EIF5P55010 431 aaKnown RBP33.54■■■□□ 2.96
SPG7-208ENST00000563783 USPL1Q5W0Q7 1092 aa33.54■■■□□ 2.96
SPG7-208ENST00000563783 RTF1Q92541 710 aaKnown RBP33.53■■■□□ 2.96
SPG7-208ENST00000563783 SCN7AQ01118 1682 aa33.52■■■□□ 2.96
SPG7-208ENST00000563783 DLG5Q8TDM6 1919 aa33.52■■■□□ 2.96
SPG7-208ENST00000563783 A0A0G2JLW4 131 aa33.51■■■□□ 2.95
SPG7-208ENST00000563783 BTBD11A6QL63 1104 aa33.51■■■□□ 2.95
SPG7-208ENST00000563783 DPEP1P16444 411 aa33.51■■■□□ 2.95
SPG7-208ENST00000563783 ATP10DQ9P241 1426 aa33.51■■■□□ 2.95
SPG7-208ENST00000563783 IL6STP40189 918 aaPredicted RBP33.49■■■□□ 2.95
SPG7-208ENST00000563783 NEFMP07197 916 aa33.48■■■□□ 2.95
SPG7-208ENST00000563783 GIGYF1O75420 1035 aaPredicted RBP33.47■■■□□ 2.95
SPG7-208ENST00000563783 KCNA3P22001 575 aa33.47■■■□□ 2.95
SPG7-208ENST00000563783 CANXP27824 592 aaKnown RBP33.47■■■□□ 2.95
SPG7-208ENST00000563783 NFIXQ14938 502 aa33.47■■■□□ 2.95
SPG7-208ENST00000563783 BCL2L12Q9HB09 334 aa33.47■■■□□ 2.95
SPG7-208ENST00000563783 DLEC1Q9Y238 1755 aa33.47■■■□□ 2.95
SPG7-208ENST00000563783 C1QTNF8P60827 252 aa33.46■■■□□ 2.95
SPG7-208ENST00000563783 PIM2Q9P1W9 311 aa33.46■■■□□ 2.95
SPG7-208ENST00000563783 BCS1LQ9Y276 419 aa33.46■■■□□ 2.95
SPG7-208ENST00000563783 RALBP1Q15311 655 aa33.45■■■□□ 2.95
SPG7-208ENST00000563783 PNNQ9H307 717 aaKnown RBP33.45■■■□□ 2.95
SPG7-208ENST00000563783 BCORQ6W2J9 1755 aa33.43■■■□□ 2.94
SPG7-208ENST00000563783 MCM10Q7L590 875 aa33.43■■■□□ 2.94
SPG7-208ENST00000563783 WWC3Q9ULE0 1092 aa33.43■■■□□ 2.94
SPG7-208ENST00000563783 SNRPA1P09661 255 aaKnown RBP33.4■■■□□ 2.94
SPG7-208ENST00000563783 PLEKHF1Q96S99 279 aa33.4■■■□□ 2.94
SPG7-208ENST00000563783 KDM3BQ7LBC6 1761 aa33.39■■■□□ 2.94
SPG7-208ENST00000563783 KCNQ3O43525 872 aa33.39■■■□□ 2.94
SPG7-208ENST00000563783 TAF7Q15545 349 aaPredicted RBP33.39■■■□□ 2.94
SPG7-208ENST00000563783 DALRD3Q5D0E6 543 aaKnown RBP33.39■■■□□ 2.94
SPG7-208ENST00000563783 NPM2Q86SE8 214 aaKnown RBP33.39■■■□□ 2.94
SPG7-208ENST00000563783 LAMB4A4D0S4 1761 aa33.39■■■□□ 2.94
SPG7-208ENST00000563783 SERPINB2P05120 415 aa33.38■■■□□ 2.93
SPG7-208ENST00000563783 GPBP1L1Q9HC44 474 aaPredicted RBP33.38■■■□□ 2.93
SPG7-208ENST00000563783 RGL2O15211 777 aa33.37■■■□□ 2.93
SPG7-208ENST00000563783 PNISRQ8TF01 805 aaKnown RBP33.36■■■□□ 2.93
SPG7-208ENST00000563783 PDZRN3Q9UPQ7 1066 aa33.36■■■□□ 2.93
SPG7-208ENST00000563783 A1BGP04217 495 aa33.35■■■□□ 2.93
SPG7-208ENST00000563783 CARMIL3Q8ND23 1372 aa33.34■■■□□ 2.93
SPG7-208ENST00000563783 NFE2L2Q16236 605 aa33.34■■■□□ 2.93
SPG7-208ENST00000563783 ARHGAP27Q6ZUM4 889 aa33.34■■■□□ 2.93
SPG7-208ENST00000563783 USP16Q9Y5T5 823 aa33.34■■■□□ 2.93
SPG7-208ENST00000563783 DCTN1Q14203 1278 aa33.33■■■□□ 2.93
SPG7-208ENST00000563783 ANKRD31Q8N7Z5 1873 aa33.33■■■□□ 2.93
SPG7-208ENST00000563783 SBF1O95248 1867 aa33.32■■■□□ 2.92
SPG7-208ENST00000563783 CHRNA5P30532 468 aa33.32■■■□□ 2.92
SPG7-208ENST00000563783 MAPK8IP3Q9UPT6 1336 aa33.31■■■□□ 2.92
SPG7-208ENST00000563783 CAMTA2O94983 1202 aa33.31■■■□□ 2.92
SPG7-208ENST00000563783 TBC1D2BQ9UPU7 963 aa33.31■■■□□ 2.92
SPG7-208ENST00000563783 TBC1D9BQ66K14 1250 aa33.3■■■□□ 2.92
SPG7-208ENST00000563783 CLEC4GQ6UXB4 293 aa33.3■■■□□ 2.92
SPG7-208ENST00000563783 DZIP3Q86Y13 1208 aaKnown RBP33.28■■■□□ 2.92
SPG7-208ENST00000563783 ZNF330Q9Y3S2 320 aaPredicted RBP33.28■■■□□ 2.92
SPG7-208ENST00000563783 MYBBP1AQ9BQG0 1328 aaKnown RBP33.28■■■□□ 2.92
SPG7-208ENST00000563783 SETDB2Q96T68 719 aa33.26■■■□□ 2.91
SPG7-208ENST00000563783 BRIP1Q9BX63 1249 aa33.26■■■□□ 2.91
SPG7-208ENST00000563783 H0YIN7 160 aa33.25■■■□□ 2.91
SPG7-208ENST00000563783 DDX10Q13206 875 aaKnown RBP33.25■■■□□ 2.91
SPG7-208ENST00000563783 BICDL1Q6ZP65 573 aa33.25■■■□□ 2.91
SPG7-208ENST00000563783 ZNF652Q9Y2D9 606 aa33.25■■■□□ 2.91
SPG7-208ENST00000563783 PRAMEF22A3QJZ6 481 aa33.24■■■□□ 2.91
SPG7-208ENST00000563783 PDE6BP35913 854 aa33.24■■■□□ 2.91
SPG7-208ENST00000563783 TTLL6Q8N841 843 aa33.24■■■□□ 2.91
SPG7-208ENST00000563783 PRR5LQ6MZQ0 368 aa33.23■■■□□ 2.91
SPG7-208ENST00000563783 C2CD5Q86YS7 1000 aa33.22■■■□□ 2.91
SPG7-208ENST00000563783 SENP3-EIF4A1A0A087X0R7 540 aa33.21■■■□□ 2.91
SPG7-208ENST00000563783 NBPF26B4DH59 902 aa33.21■■■□□ 2.91
SPG7-208ENST00000563783 NBPF10Q6P3W6 841 aaKnown RBP33.21■■■□□ 2.91
SPG7-208ENST00000563783 NBPF15Q8N660 670 aa33.21■■■□□ 2.91
SPG7-208ENST00000563783 COL11A2P13942 1736 aaPredicted RBP33.21■■■□□ 2.91
SPG7-208ENST00000563783 ZC3H4Q9UPT8 1303 aaKnown RBP33.21■■■□□ 2.91
SPG7-208ENST00000563783 ARFGEF2Q9Y6D5 1785 aa33.2■■■□□ 2.91
SPG7-208ENST00000563783 C9orf131Q5VYM1 1079 aa33.2■■■□□ 2.91
SPG7-208ENST00000563783 CNBD1Q8NA66 436 aa33.2■■■□□ 2.91
SPG7-208ENST00000563783 BABAM1Q9NWV8 329 aa33.2■■■□□ 2.91
SPG7-208ENST00000563783 ZNF526Q8TF50 670 aaPredicted RBP33.19■■■□□ 2.9
SPG7-208ENST00000563783 EIF4A1P60842 406 aaKnown RBP33.18■■■□□ 2.9
SPG7-208ENST00000563783 LMOD3Q0VAK6 560 aa33.18■■■□□ 2.9
SPG7-208ENST00000563783 KIF3CO14782 793 aa33.17■■■□□ 2.9
SPG7-208ENST00000563783 MIS18AQ9NYP9 233 aa33.17■■■□□ 2.9
SPG7-208ENST00000563783 ST5P78524 1137 aa33.16■■■□□ 2.9
SPG7-208ENST00000563783 ERBB4Q15303 1308 aa33.15■■■□□ 2.9
SPG7-208ENST00000563783 CCDC88AQ3V6T2 1871 aa33.14■■■□□ 2.9
SPG7-208ENST00000563783 NUP98P52948 1817 aa33.14■■■□□ 2.9
SPG7-208ENST00000563783 PIP4K2AP48426 406 aaPredicted RBP33.14■■■□□ 2.9
SPG7-208ENST00000563783 FER1L6Q2WGJ9 1857 aa33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms