RNA–Protein interactions for RNA: ENST00000563522.5

PDXDC1-208, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-208ENST00000563522 TRPC6Q9Y210 931 aa11.27□□□□□ -0.61
PDXDC1-208ENST00000563522 RTCBQ9Y3I0 505 aaKnown RBP11.27□□□□□ -0.61
PDXDC1-208ENST00000563522 AMOTQ4VCS5 1084 aa11.26□□□□□ -0.61
PDXDC1-208ENST00000563522 TRAPPC3LQ5T215 181 aa11.26□□□□□ -0.61
PDXDC1-208ENST00000563522 LHX8Q68G74 356 aa11.26□□□□□ -0.61
PDXDC1-208ENST00000563522 CNTNAP4Q9C0A0 1308 aa11.26□□□□□ -0.61
PDXDC1-208ENST00000563522 CLSPNQ9HAW4 1339 aa11.26□□□□□ -0.61
PDXDC1-208ENST00000563522 ZNF831Q5JPB2 1677 aa11.26□□□□□ -0.61
PDXDC1-208ENST00000563522 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
PDXDC1-208ENST00000563522 C7P10643 843 aa11.25□□□□□ -0.61
PDXDC1-208ENST00000563522 ATN1P54259 1190 aaPredicted RBP11.25□□□□□ -0.61
PDXDC1-208ENST00000563522 PLEKHO1Q53GL0 409 aaPredicted RBP11.25□□□□□ -0.61
PDXDC1-208ENST00000563522 ZNF526Q8TF50 670 aaPredicted RBP11.25□□□□□ -0.61
PDXDC1-208ENST00000563522 PCDHB8Q9UN66 801 aa11.25□□□□□ -0.61
PDXDC1-208ENST00000563522 CEP350Q5VT06 3117 aa11.25□□□□□ -0.61
PDXDC1-208ENST00000563522 C10orf71Q711Q0 1435 aa11.25□□□□□ -0.61
PDXDC1-208ENST00000563522 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
PDXDC1-208ENST00000563522 KIF3CO14782 793 aa11.24□□□□□ -0.61
PDXDC1-208ENST00000563522 RPS6KA4O75676 772 aa11.24□□□□□ -0.61
PDXDC1-208ENST00000563522 ARHGEF1Q92888 912 aaKnown RBP11.24□□□□□ -0.61
PDXDC1-208ENST00000563522 SLC4A9Q96Q91 983 aa11.24□□□□□ -0.61
PDXDC1-208ENST00000563522 CCDC87Q9NVE4 849 aa11.24□□□□□ -0.61
PDXDC1-208ENST00000563522 GYS1P13807 737 aa11.23□□□□□ -0.61
PDXDC1-208ENST00000563522 RFC4P35249 363 aa11.23□□□□□ -0.61
PDXDC1-208ENST00000563522 TNNT2P45379 298 aaPredicted RBP11.23□□□□□ -0.61
PDXDC1-208ENST00000563522 CABP4P57796 275 aa11.23□□□□□ -0.61
PDXDC1-208ENST00000563522 ZNF530Q6P9A1 599 aaPredicted RBP11.23□□□□□ -0.61
PDXDC1-208ENST00000563522 TMEM106CQ9BVX2 250 aa11.23□□□□□ -0.61
PDXDC1-208ENST00000563522 WWC3Q9ULE0 1092 aa11.23□□□□□ -0.61
PDXDC1-208ENST00000563522 KDM6AO15550 1401 aaPredicted RBP11.22□□□□□ -0.61
PDXDC1-208ENST00000563522 KIF13BQ9NQT8 1826 aa11.22□□□□□ -0.61
PDXDC1-208ENST00000563522 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
PDXDC1-208ENST00000563522 PARP3Q9Y6F1 533 aa11.22□□□□□ -0.61
PDXDC1-208ENST00000563522 A0A0G2JLW4 131 aa11.21□□□□□ -0.61
PDXDC1-208ENST00000563522 APLP1P51693 650 aa11.21□□□□□ -0.61
PDXDC1-208ENST00000563522 C1orf141Q5JVX7 400 aa11.21□□□□□ -0.61
PDXDC1-208ENST00000563522 BCS1LQ9Y276 419 aa11.21□□□□□ -0.61
PDXDC1-208ENST00000563522 TOMM70O94826 608 aa11.2□□□□□ -0.62
PDXDC1-208ENST00000563522 DPEP1P16444 411 aa11.2□□□□□ -0.62
PDXDC1-208ENST00000563522 MTHFSP49914 203 aa11.2□□□□□ -0.62
PDXDC1-208ENST00000563522 EIF4G2P78344 907 aaKnown RBP eCLIP11.2□□□□□ -0.62
PDXDC1-208ENST00000563522 ARHGAP27Q6ZUM4 889 aa11.2□□□□□ -0.62
PDXDC1-208ENST00000563522 POLR3GLQ9BT43 218 aa11.2□□□□□ -0.62
PDXDC1-208ENST00000563522 PANK3Q9H999 370 aa11.2□□□□□ -0.62
PDXDC1-208ENST00000563522 C4AP0C0L4 1744 aa11.19□□□□□ -0.62
PDXDC1-208ENST00000563522 KIAA1551Q9HCM1 1747 aa11.19□□□□□ -0.62
PDXDC1-208ENST00000563522 FCHSD2O94868 740 aa11.19□□□□□ -0.62
PDXDC1-208ENST00000563522 CRKLP46109 303 aaKnown RBP11.19□□□□□ -0.62
PDXDC1-208ENST00000563522 TRIM35Q9UPQ4 493 aa11.19□□□□□ -0.62
PDXDC1-208ENST00000563522 COL5A3P25940 1745 aaPredicted RBP11.18□□□□□ -0.62
PDXDC1-208ENST00000563522 USP42Q9H9J4 1324 aaKnown RBP11.18□□□□□ -0.62
PDXDC1-208ENST00000563522 PTCD1O75127 700 aaKnown RBP11.18□□□□□ -0.62
PDXDC1-208ENST00000563522 KCNA3P22001 575 aa11.18□□□□□ -0.62
PDXDC1-208ENST00000563522 MORC1Q86VD1 984 aa11.18□□□□□ -0.62
PDXDC1-208ENST00000563522 NFATC2IPQ8NCF5 419 aa11.18□□□□□ -0.62
PDXDC1-208ENST00000563522 PIM2Q9P1W9 311 aa11.18□□□□□ -0.62
PDXDC1-208ENST00000563522 HSPA5P11021 654 aaKnown RBP11.17□□□□□ -0.62
PDXDC1-208ENST00000563522 DALRD3Q5D0E6 543 aaKnown RBP11.17□□□□□ -0.62
PDXDC1-208ENST00000563522 AEBP1Q8IUX7 1158 aa11.17□□□□□ -0.62
PDXDC1-208ENST00000563522 SEC24BO95487 1268 aa11.16□□□□□ -0.62
PDXDC1-208ENST00000563522 AKAP4Q5JQC9 854 aa11.16□□□□□ -0.62
PDXDC1-208ENST00000563522 C9orf131Q5VYM1 1079 aa11.16□□□□□ -0.62
PDXDC1-208ENST00000563522 SULT6B1Q6IMI4 303 aa11.16□□□□□ -0.62
PDXDC1-208ENST00000563522 INTS5Q6P9B9 1019 aaKnown RBP11.16□□□□□ -0.62
PDXDC1-208ENST00000563522 RBM46Q8TBY0 533 aaKnown RBP11.16□□□□□ -0.62
PDXDC1-208ENST00000563522 TM4SF1P30408 202 aa11.15□□□□□ -0.62
PDXDC1-208ENST00000563522 IL13P35225 146 aa11.15□□□□□ -0.62
PDXDC1-208ENST00000563522 DDR1Q08345 913 aa11.15□□□□□ -0.62
PDXDC1-208ENST00000563522 GOLGA2Q08379 1002 aa11.15□□□□□ -0.62
PDXDC1-208ENST00000563522 FSTL1Q12841 308 aa11.15□□□□□ -0.62
PDXDC1-208ENST00000563522 DNAJC5GQ8N7S2 189 aa11.15□□□□□ -0.62
PDXDC1-208ENST00000563522 NMRK2Q9NPI5 230 aa11.15□□□□□ -0.62
PDXDC1-208ENST00000563522 SRP68Q9UHB9 627 aaKnown RBP11.15□□□□□ -0.62
PDXDC1-208ENST00000563522 KNSTRNQ9Y448 316 aa11.15□□□□□ -0.62
PDXDC1-208ENST00000563522 N4BP2Q86UW6 1770 aaPredicted RBP11.15□□□□□ -0.62
PDXDC1-208ENST00000563522 KDM2BQ8NHM5 1336 aa11.14□□□□□ -0.63
PDXDC1-208ENST00000563522 ZC3H4Q9UPT8 1303 aaKnown RBP11.14□□□□□ -0.63
PDXDC1-208ENST00000563522 POLRMTO00411 1230 aaKnown RBP11.14□□□□□ -0.63
PDXDC1-208ENST00000563522 ZPR1O75312 459 aa11.14□□□□□ -0.63
PDXDC1-208ENST00000563522 IER5LQ5T953 404 aa11.14□□□□□ -0.63
PDXDC1-208ENST00000563522 SLC52A2Q9HAB3 445 aa11.14□□□□□ -0.63
PDXDC1-208ENST00000563522 SOS1Q07889 1333 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-208ENST00000563522 PSEN1P49768 467 aa11.13□□□□□ -0.63
PDXDC1-208ENST00000563522 PDAP1Q13442 181 aaKnown RBP11.13□□□□□ -0.63
PDXDC1-208ENST00000563522 C16orf71Q8IYS4 520 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-208ENST00000563522 MRC1P22897 1456 aa11.12□□□□□ -0.63
PDXDC1-208ENST00000563522 MYH14Q7Z406 1995 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-208ENST00000563522 CYP19A1P11511 503 aaPredicted RBP11.12□□□□□ -0.63
PDXDC1-208ENST00000563522 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
PDXDC1-208ENST00000563522 RNF181Q9P0P0 153 aa11.12□□□□□ -0.63
PDXDC1-208ENST00000563522 BRCA1P38398 1863 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-208ENST00000563522 TJP1Q07157 1748 aa11.12□□□□□ -0.63
PDXDC1-208ENST00000563522 ARFGEF1Q9Y6D6 1849 aa11.12□□□□□ -0.63
PDXDC1-208ENST00000563522 RNMTO43148 476 aaKnown RBP11.11□□□□□ -0.63
PDXDC1-208ENST00000563522 CHRNA5P30532 468 aa11.11□□□□□ -0.63
PDXDC1-208ENST00000563522 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
PDXDC1-208ENST00000563522 USPL1Q5W0Q7 1092 aa11.11□□□□□ -0.63
PDXDC1-208ENST00000563522 DNAJC10Q8IXB1 793 aa11.11□□□□□ -0.63
PDXDC1-208ENST00000563522 NARFQ9UHQ1 456 aa11.11□□□□□ -0.63
PDXDC1-208ENST00000563522 ADAMTS7Q9UKP4 1686 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms