RNA–Protein interactions for RNA: ENST00000563494.5

GGA2-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-205ENST00000563494 POLRMTO00411 1230 aaKnown RBP28.18■■■□□ 2.1
GGA2-205ENST00000563494 DPEP1P16444 411 aa28.18■■■□□ 2.1
GGA2-205ENST00000563494 USPL1Q5W0Q7 1092 aa28.18■■■□□ 2.1
GGA2-205ENST00000563494 HEG1Q9ULI3 1381 aa28.18■■■□□ 2.1
GGA2-205ENST00000563494 COL15A1P39059 1388 aa28.17■■■□□ 2.1
GGA2-205ENST00000563494 NUDCQ9Y266 331 aa28.17■■■□□ 2.1
GGA2-205ENST00000563494 NRXN2Q9P2S2 1712 aa28.17■■■□□ 2.1
GGA2-205ENST00000563494 EIF5P55010 431 aaKnown RBP28.16■■■□□ 2.1
GGA2-205ENST00000563494 C1QTNF8P60827 252 aa28.16■■■□□ 2.1
GGA2-205ENST00000563494 TEFQ10587 303 aa28.16■■■□□ 2.1
GGA2-205ENST00000563494 ATP10DQ9P241 1426 aa28.15■■■□□ 2.1
GGA2-205ENST00000563494 KCNQ3O43525 872 aa28.14■■■□□ 2.1
GGA2-205ENST00000563494 U2AF1L5P0DN76 240 aaPredicted RBP28.14■■■□□ 2.1
GGA2-205ENST00000563494 U2AF1Q01081 240 aaKnown RBP eCLIP28.14■■■□□ 2.11e-7■■■□□ 18.5
GGA2-205ENST00000563494 AFDNP55196 1824 aaKnown RBP28.13■■■□□ 2.09
GGA2-205ENST00000563494 TTC5Q8N0Z6 440 aa28.13■■■□□ 2.09
GGA2-205ENST00000563494 ZPR1O75312 459 aa28.12■■■□□ 2.09
GGA2-205ENST00000563494 NFIXQ14938 502 aa28.12■■■□□ 2.09
GGA2-205ENST00000563494 ARFGEF1Q9Y6D6 1849 aa28.11■■■□□ 2.09
GGA2-205ENST00000563494 STARD3NLO95772 234 aa28.11■■■□□ 2.09
GGA2-205ENST00000563494 TEX13AQ9BXU3 409 aaPredicted RBP28.11■■■□□ 2.09
GGA2-205ENST00000563494 CANXP27824 592 aaKnown RBP28.1■■■□□ 2.09
GGA2-205ENST00000563494 BCS1LQ9Y276 419 aa28.1■■■□□ 2.09
GGA2-205ENST00000563494 BTBD11A6QL63 1104 aa28.08■■■□□ 2.09
GGA2-205ENST00000563494 HTATSF1O43719 755 aaKnown RBP28.08■■■□□ 2.09
GGA2-205ENST00000563494 FMNL2Q96PY5 1086 aa28.08■■■□□ 2.09
GGA2-205ENST00000563494 GIGYF1O75420 1035 aaPredicted RBP28.07■■■□□ 2.08
GGA2-205ENST00000563494 MCM10Q7L590 875 aa28.07■■■□□ 2.08
GGA2-205ENST00000563494 PLEKHF1Q96S99 279 aa28.07■■■□□ 2.08
GGA2-205ENST00000563494 A1BGP04217 495 aa28.05■■■□□ 2.08
GGA2-205ENST00000563494 IL6STP40189 918 aaPredicted RBP28.05■■■□□ 2.08
GGA2-205ENST00000563494 DCTN1Q14203 1278 aa28.05■■■□□ 2.08
GGA2-205ENST00000563494 PIM2Q9P1W9 311 aa28.05■■■□□ 2.08
GGA2-205ENST00000563494 SCN7AQ01118 1682 aa28.04■■■□□ 2.08
GGA2-205ENST00000563494 CHRNA5P30532 468 aa28.04■■■□□ 2.08
GGA2-205ENST00000563494 USP16Q9Y5T5 823 aa28.04■■■□□ 2.08
GGA2-205ENST00000563494 DLG5Q8TDM6 1919 aa28.04■■■□□ 2.08
GGA2-205ENST00000563494 SERPINB2P05120 415 aa28.03■■■□□ 2.08
GGA2-205ENST00000563494 A0A087WZG4 1122 aa28.02■■■□□ 2.08
GGA2-205ENST00000563494 PRAMEF22A3QJZ6 481 aa28.02■■■□□ 2.08
GGA2-205ENST00000563494 DLEC1Q9Y238 1755 aa28.01■■■□□ 2.07
GGA2-205ENST00000563494 CEP350Q5VT06 3117 aa28■■■□□ 2.07
GGA2-205ENST00000563494 TBC1D2BQ9UPU7 963 aa28■■■□□ 2.07
GGA2-205ENST00000563494 TBC1D9BQ66K14 1250 aa27.99■■■□□ 2.07
GGA2-205ENST00000563494 ARHGAP27Q6ZUM4 889 aa27.99■■■□□ 2.07
GGA2-205ENST00000563494 RTF1Q92541 710 aaKnown RBP27.99■■■□□ 2.07
GGA2-205ENST00000563494 GPBP1L1Q9HC44 474 aaPredicted RBP27.99■■■□□ 2.07
GGA2-205ENST00000563494 CARMIL3Q8ND23 1372 aa27.99■■■□□ 2.07
GGA2-205ENST00000563494 CAMTA2O94983 1202 aa27.98■■■□□ 2.07
GGA2-205ENST00000563494 DALRD3Q5D0E6 543 aaKnown RBP27.98■■■□□ 2.07
GGA2-205ENST00000563494 ANKRD31Q8N7Z5 1873 aa27.98■■■□□ 2.07
GGA2-205ENST00000563494 BCORQ6W2J9 1755 aa27.97■■■□□ 2.07
GGA2-205ENST00000563494 SNRPA1P09661 255 aaKnown RBP27.96■■■□□ 2.07
GGA2-205ENST00000563494 TAF7Q15545 349 aaPredicted RBP27.96■■■□□ 2.07
GGA2-205ENST00000563494 SBF1O95248 1867 aa27.95■■■□□ 2.07
GGA2-205ENST00000563494 KIF3CO14782 793 aa27.95■■■□□ 2.06
GGA2-205ENST00000563494 KDM3BQ7LBC6 1761 aa27.94■■■□□ 2.06
GGA2-205ENST00000563494 NBPF26B4DH59 902 aa27.94■■■□□ 2.06
GGA2-205ENST00000563494 NBPF10Q6P3W6 841 aaKnown RBP27.94■■■□□ 2.06
GGA2-205ENST00000563494 NBPF15Q8N660 670 aa27.94■■■□□ 2.06
GGA2-205ENST00000563494 ZNF526Q8TF50 670 aaPredicted RBP27.94■■■□□ 2.06
GGA2-205ENST00000563494 PIP4K2AP48426 406 aaPredicted RBP27.92■■■□□ 2.06
GGA2-205ENST00000563494 RALBP1Q15311 655 aa27.92■■■□□ 2.06
GGA2-205ENST00000563494 BICDL1Q6ZP65 573 aa27.92■■■□□ 2.06
GGA2-205ENST00000563494 MIS18AQ9NYP9 233 aa27.92■■■□□ 2.06
GGA2-205ENST00000563494 SENP3-EIF4A1A0A087X0R7 540 aa27.91■■■□□ 2.06
GGA2-205ENST00000563494 NFE2L2Q16236 605 aa27.91■■■□□ 2.06
GGA2-205ENST00000563494 PRR5LQ6MZQ0 368 aa27.9■■■□□ 2.06
GGA2-205ENST00000563494 C9orf131Q5VYM1 1079 aa27.89■■■□□ 2.06
GGA2-205ENST00000563494 DZIP3Q86Y13 1208 aaKnown RBP27.89■■■□□ 2.06
GGA2-205ENST00000563494 PRELPP51888 382 aa27.88■■■□□ 2.05
GGA2-205ENST00000563494 BRIP1Q9BX63 1249 aa27.88■■■□□ 2.05
GGA2-205ENST00000563494 ZNF330Q9Y3S2 320 aaPredicted RBP27.88■■■□□ 2.05
GGA2-205ENST00000563494 LAMB4A4D0S4 1761 aa27.87■■■□□ 2.05
GGA2-205ENST00000563494 CLEC4GQ6UXB4 293 aa27.87■■■□□ 2.05
GGA2-205ENST00000563494 C2CD5Q86YS7 1000 aa27.87■■■□□ 2.05
GGA2-205ENST00000563494 COL11A2P13942 1736 aaPredicted RBP27.87■■■□□ 2.05
GGA2-205ENST00000563494 RGL2O15211 777 aa27.86■■■□□ 2.05
GGA2-205ENST00000563494 DDX10Q13206 875 aaKnown RBP27.86■■■□□ 2.05
GGA2-205ENST00000563494 THUMPD2Q9BTF0 503 aaKnown RBP27.86■■■□□ 2.05
GGA2-205ENST00000563494 H0YIN7 160 aa27.85■■■□□ 2.05
GGA2-205ENST00000563494 EIF4A1P60842 406 aaKnown RBP27.85■■■□□ 2.05
GGA2-205ENST00000563494 TTLL6Q8N841 843 aa27.85■■■□□ 2.05
GGA2-205ENST00000563494 CCDC24Q8N4L8 307 aa27.84■■■□□ 2.05
GGA2-205ENST00000563494 PNISRQ8TF01 805 aaKnown RBP27.84■■■□□ 2.05
GGA2-205ENST00000563494 SETDB2Q96T68 719 aa27.84■■■□□ 2.05
GGA2-205ENST00000563494 PNNQ9H307 717 aaKnown RBP27.83■■■□□ 2.05
GGA2-205ENST00000563494 PDZRN3Q9UPQ7 1066 aa27.82■■■□□ 2.04
GGA2-205ENST00000563494 NEFMP07197 916 aa27.81■■■□□ 2.04
GGA2-205ENST00000563494 PDE6BP35913 854 aa27.81■■■□□ 2.04
GGA2-205ENST00000563494 NMRK2Q9NPI5 230 aa27.81■■■□□ 2.04
GGA2-205ENST00000563494 KLRG2A4D1S0 409 aaPredicted RBP27.79■■■□□ 2.04
GGA2-205ENST00000563494 NFKBIEO00221 500 aa27.79■■■□□ 2.04
GGA2-205ENST00000563494 RASSF7Q02833 373 aa27.79■■■□□ 2.04
GGA2-205ENST00000563494 RNF181Q9P0P0 153 aa27.79■■■□□ 2.04
GGA2-205ENST00000563494 MYBBP1AQ9BQG0 1328 aaKnown RBP27.78■■■□□ 2.04
GGA2-205ENST00000563494 HLFQ16534 295 aa27.78■■■□□ 2.04
GGA2-205ENST00000563494 NPM2Q86SE8 214 aaKnown RBP27.78■■■□□ 2.04
GGA2-205ENST00000563494 CNBD1Q8NA66 436 aa27.78■■■□□ 2.04
GGA2-205ENST00000563494 FER1L6Q2WGJ9 1857 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms