RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 FAM177A1Q8N128 213 aaPredicted RBP7.24□□□□□ -1.25
CLK3-212ENST00000563418 ZMAT2Q96NC0 199 aaKnown RBP7.24□□□□□ -1.25
CLK3-212ENST00000563418 TRHP20396 242 aaPredicted RBP7.24□□□□□ -1.25
CLK3-212ENST00000563418 CFAP100Q494V2 611 aa7.24□□□□□ -1.25
CLK3-212ENST00000563418 LARP1BQ659C4 914 aaKnown RBP7.24□□□□□ -1.25
CLK3-212ENST00000563418 DDX41Q9UJV9 622 aaKnown RBP7.24□□□□□ -1.25
CLK3-212ENST00000563418 LOC102724159A0A0B4J2E5 919 aa7.24□□□□□ -1.25
CLK3-212ENST00000563418 PWP2Q15269 919 aaKnown RBP7.24□□□□□ -1.25
CLK3-212ENST00000563418 CCDC40Q4G0X9 1142 aa7.24□□□□□ -1.25
CLK3-212ENST00000563418 CCDC186Q7Z3E2 898 aa7.24□□□□□ -1.25
CLK3-212ENST00000563418 LACTBP83111 547 aaPredicted RBP7.23□□□□□ -1.25
CLK3-212ENST00000563418 ELF2Q15723 593 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 RBM26Q5T8P6 1007 aaKnown RBP7.23□□□□□ -1.25
CLK3-212ENST00000563418 CCDC97Q96F63 343 aaPredicted RBP7.23□□□□□ -1.25
CLK3-212ENST00000563418 RBSNQ9H1K0 784 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 NBPF20Q3BBV1 942 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 ATF7IPQ6VMQ6 1270 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 INTS4Q96HW7 963 aaKnown RBP7.23□□□□□ -1.25
CLK3-212ENST00000563418 CTAGE9A4FU28 777 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 PPP1R12AO14974 1030 aaPredicted RBP7.23□□□□□ -1.25
CLK3-212ENST00000563418 C6orf163Q5TEZ5 329 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 STMN4Q9H169 189 aaPredicted RBP7.23□□□□□ -1.25
CLK3-212ENST00000563418 SUFUQ9UMX1 484 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 CEP104O60308 925 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 GNG11P61952 73 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 IMPACTQ9P2X3 320 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 DNAI1Q9UI46 699 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 ATP2B1P20020 1258 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 SAFBQ15424 915 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLK3-212ENST00000563418 RBM27Q9P2N5 1060 aaKnown RBP7.23□□□□□ -1.25
CLK3-212ENST00000563418 FAM184BQ9ULE4 1060 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 ATP11AP98196 1134 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 FOXD1Q16676 465 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 UTP14AQ9BVJ6 771 aaKnown RBP7.23□□□□□ -1.25
CLK3-212ENST00000563418 TRMT1Q9NXH9 659 aaKnown RBP7.23□□□□□ -1.25
CLK3-212ENST00000563418 DONSONQ9NYP3 566 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 NBPF7P0C2Y1 421 aaPredicted RBP7.23□□□□□ -1.25
CLK3-212ENST00000563418 STK38Q15208 465 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 CEP128Q6ZU80 1094 aa7.23□□□□□ -1.25
CLK3-212ENST00000563418 ZNF830Q96NB3 372 aaPredicted RBP7.23□□□□□ -1.25
CLK3-212ENST00000563418 LRRC23Q53EV4 343 aaPredicted RBP7.22□□□□□ -1.25
CLK3-212ENST00000563418 FAM71BQ8TC56 605 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 CCDC12Q8WUD4 166 aaPredicted RBP7.22□□□□□ -1.25
CLK3-212ENST00000563418 EFCAB5A4FU69 1503 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 ME1P48163 572 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 GNAI1P63096 354 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 MAP7Q14244 749 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 MPHOSPH8Q99549 860 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 HYPKQ9NX55 129 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 GBP1P32455 592 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 ANAPC15P60006 121 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 PPFIA1Q13136 1202 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 CCDC158Q5M9N0 1113 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 NCAPD3P42695 1498 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 BIRC2Q13490 618 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 DAAM2Q86T65 1068 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 ODF2LQ9ULJ1 636 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 MORC2Q9Y6X9 1032 aaPredicted RBP7.22□□□□□ -1.25
CLK3-212ENST00000563418 TTC36A6NLP5 189 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 GUCY2CP25092 1073 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 SNCBQ16143 134 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 HDGFL2Q7Z4V5 671 aaPredicted RBP7.22□□□□□ -1.25
CLK3-212ENST00000563418 TRIM4Q9C037 500 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 MAGEC2Q9UBF1 373 aaPredicted RBP7.22□□□□□ -1.25
CLK3-212ENST00000563418 EFCAB8A8MWE9 144 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 DDX46Q7L014 1031 aaKnown RBP7.22□□□□□ -1.25
CLK3-212ENST00000563418 TTC14Q96N46 770 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 EHBP1L1Q8N3D4 1523 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 ARAP1Q96P48 1450 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 CXorf56Q9H5V9 222 aa7.22□□□□□ -1.25
CLK3-212ENST00000563418 FEZ2Q9UHY8 353 aaPredicted RBP7.21□□□□□ -1.25
CLK3-212ENST00000563418 BCAR3O75815 825 aa7.21□□□□□ -1.25
CLK3-212ENST00000563418 EVCP57679 992 aa7.21□□□□□ -1.25
CLK3-212ENST00000563418 CNKSR2Q8WXI2 1034 aa7.21□□□□□ -1.25
CLK3-212ENST00000563418 NDUFAB1O14561 156 aa7.21□□□□□ -1.25
CLK3-212ENST00000563418 CCDC184Q52MB2 194 aa7.21□□□□□ -1.26
CLK3-212ENST00000563418 ZMYM4Q5VZL5 1548 aa7.21□□□□□ -1.26
CLK3-212ENST00000563418 ALS2CR12Q96Q35 445 aa7.21□□□□□ -1.26
CLK3-212ENST00000563418 PTGS1P23219 599 aa7.21□□□□□ -1.26
CLK3-212ENST00000563418 STX6O43752 255 aa7.21□□□□□ -1.26
CLK3-212ENST00000563418 MUM1L1Q5H9M0 696 aa7.21□□□□□ -1.26
CLK3-212ENST00000563418 SYT10Q6XYQ8 523 aa7.21□□□□□ -1.26
CLK3-212ENST00000563418 TMC6Q7Z403 805 aa7.21□□□□□ -1.26
CLK3-212ENST00000563418 RMDN2Q96LZ7 410 aa7.21□□□□□ -1.26
CLK3-212ENST00000563418 IBSPP21815 317 aaPredicted RBP7.21□□□□□ -1.26
CLK3-212ENST00000563418 SF3B2Q13435 895 aaKnown RBP7.21□□□□□ -1.26
CLK3-212ENST00000563418 PPP2R1AP30153 589 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 PAFAH1B1P43034 410 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 GOLGA6CA6NDK9 693 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 GOLGA6DP0CG33 693 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 ARMC2Q8NEN0 867 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 N4BP2L2Q92802 583 aaPredicted RBP7.2□□□□□ -1.26
CLK3-212ENST00000563418 FBXW7Q969H0 707 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 GOLGA6AQ9NYA3 693 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 CCDC69A6NI79 296 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 CACNA2D3Q8IZS8 1091 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 CASKIN1Q8WXD9 1431 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 MYO1BO43795 1136 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 PPP2R3AQ06190 1150 aa7.2□□□□□ -1.26
CLK3-212ENST00000563418 CAMK4Q16566 473 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms