RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 FCHSD2O94868 740 aa28.24■■■□□ 2.11
CHD9-208ENST00000563410 COL15A1P39059 1388 aa28.24■■■□□ 2.11
CHD9-208ENST00000563410 NRXN2Q9P2S2 1712 aa28.23■■■□□ 2.11
CHD9-208ENST00000563410 IL17REQ8NFR9 667 aa28.23■■■□□ 2.11
CHD9-208ENST00000563410 GAS2L2Q8NHY3 880 aa28.22■■■□□ 2.11
CHD9-208ENST00000563410 NARFQ9UHQ1 456 aa28.22■■■□□ 2.11
CHD9-208ENST00000563410 GNAT3A8MTJ3 354 aa28.21■■■□□ 2.11
CHD9-208ENST00000563410 ARHGAP27Q6ZUM4 889 aa28.21■■■□□ 2.11
CHD9-208ENST00000563410 BCL2L12Q9HB09 334 aa28.2■■■□□ 2.1
CHD9-208ENST00000563410 PIM2Q9P1W9 311 aa28.2■■■□□ 2.1
CHD9-208ENST00000563410 KIF3CO14782 793 aa28.18■■■□□ 2.1
CHD9-208ENST00000563410 NFIXQ14938 502 aa28.18■■■□□ 2.1
CHD9-208ENST00000563410 TTC5Q8N0Z6 440 aa28.18■■■□□ 2.1
CHD9-208ENST00000563410 SBF1O95248 1867 aa28.17■■■□□ 2.1
CHD9-208ENST00000563410 CHRNA5P30532 468 aa28.17■■■□□ 2.1
CHD9-208ENST00000563410 TEFQ10587 303 aa28.17■■■□□ 2.1
CHD9-208ENST00000563410 ZNF790Q6PG37 636 aa28.17■■■□□ 2.1
CHD9-208ENST00000563410 ZNF496Q96IT1 587 aaPredicted RBP28.17■■■□□ 2.1
CHD9-208ENST00000563410 PHACTR3Q96KR7 559 aa28.17■■■□□ 2.1
CHD9-208ENST00000563410 CEMIPQ8WUJ3 1361 aa28.16■■■□□ 2.1
CHD9-208ENST00000563410 CANXP27824 592 aaKnown RBP28.16■■■□□ 2.1
CHD9-208ENST00000563410 RSPH6AQ9H0K4 717 aa28.16■■■□□ 2.1
CHD9-208ENST00000563410 DLEC1Q9Y238 1755 aa28.16■■■□□ 2.1
CHD9-208ENST00000563410 HEG1Q9ULI3 1381 aa28.15■■■□□ 2.1
CHD9-208ENST00000563410 DALRD3Q5D0E6 543 aaKnown RBP28.15■■■□□ 2.1
CHD9-208ENST00000563410 PRKAR2BP31323 418 aa28.14■■■□□ 2.1
CHD9-208ENST00000563410 EIF5P55010 431 aaKnown RBP28.14■■■□□ 2.1
CHD9-208ENST00000563410 CFAP53Q96M91 514 aa28.14■■■□□ 2.1
CHD9-208ENST00000563410 STARD3NLO95772 234 aa28.13■■■□□ 2.09
CHD9-208ENST00000563410 SCN7AQ01118 1682 aa28.12■■■□□ 2.09
CHD9-208ENST00000563410 PPP2R1AP30153 589 aa28.11■■■□□ 2.09
CHD9-208ENST00000563410 SERPINB2P05120 415 aa28.1■■■□□ 2.09
CHD9-208ENST00000563410 HSPA6P17066 643 aa28.1■■■□□ 2.09
CHD9-208ENST00000563410 C9orf131Q5VYM1 1079 aa28.1■■■□□ 2.09
CHD9-208ENST00000563410 TEX13AQ9BXU3 409 aaPredicted RBP28.09■■■□□ 2.09
CHD9-208ENST00000563410 ANKRD31Q8N7Z5 1873 aa28.08■■■□□ 2.09
CHD9-208ENST00000563410 KCNQ3O43525 872 aa28.08■■■□□ 2.09
CHD9-208ENST00000563410 NUDCQ9Y266 331 aa28.08■■■□□ 2.09
CHD9-208ENST00000563410 A0A087WZG4 1122 aa28.07■■■□□ 2.08
CHD9-208ENST00000563410 FMNL2Q96PY5 1086 aa28.07■■■□□ 2.08
CHD9-208ENST00000563410 CARMIL3Q8ND23 1372 aa28.07■■■□□ 2.08
CHD9-208ENST00000563410 BTBD11A6QL63 1104 aa28.05■■■□□ 2.08
CHD9-208ENST00000563410 U2AF1L5P0DN76 240 aaPredicted RBP28.05■■■□□ 2.08
CHD9-208ENST00000563410 U2AF1Q01081 240 aaKnown RBP eCLIP28.05■■■□□ 2.08
CHD9-208ENST00000563410 NMRK2Q9NPI5 230 aa28.05■■■□□ 2.08
CHD9-208ENST00000563410 CCDC88AQ3V6T2 1871 aa28.04■■■□□ 2.08
CHD9-208ENST00000563410 A1BGP04217 495 aa28.04■■■□□ 2.08
CHD9-208ENST00000563410 IL6STP40189 918 aaPredicted RBP28.04■■■□□ 2.08
CHD9-208ENST00000563410 TBC1D9BQ66K14 1250 aa28.04■■■□□ 2.08
CHD9-208ENST00000563410 BICDL1Q6ZP65 573 aa28.04■■■□□ 2.08
CHD9-208ENST00000563410 BCORQ6W2J9 1755 aa28.04■■■□□ 2.08
CHD9-208ENST00000563410 TBC1D2BQ9UPU7 963 aa28.03■■■□□ 2.08
CHD9-208ENST00000563410 RNF181Q9P0P0 153 aa28.02■■■□□ 2.08
CHD9-208ENST00000563410 ZNF330Q9Y3S2 320 aaPredicted RBP28.02■■■□□ 2.08
CHD9-208ENST00000563410 DLG5Q8TDM6 1919 aa28.01■■■□□ 2.07
CHD9-208ENST00000563410 MCM10Q7L590 875 aa28.01■■■□□ 2.07
CHD9-208ENST00000563410 TOMM70O94826 608 aa28■■■□□ 2.07
CHD9-208ENST00000563410 USP16Q9Y5T5 823 aa28■■■□□ 2.07
CHD9-208ENST00000563410 COL11A2P13942 1736 aaPredicted RBP28■■■□□ 2.07
CHD9-208ENST00000563410 RASSF7Q02833 373 aa27.99■■■□□ 2.07
CHD9-208ENST00000563410 C2CD5Q86YS7 1000 aa27.99■■■□□ 2.07
CHD9-208ENST00000563410 PRAMEF22A3QJZ6 481 aa27.98■■■□□ 2.07
CHD9-208ENST00000563410 CAMTA2O94983 1202 aa27.98■■■□□ 2.07
CHD9-208ENST00000563410 TTLL6Q8N841 843 aa27.98■■■□□ 2.07
CHD9-208ENST00000563410 RTF1Q92541 710 aaKnown RBP27.98■■■□□ 2.07
CHD9-208ENST00000563410 H0YIN7 160 aa27.97■■■□□ 2.07
CHD9-208ENST00000563410 DCTN1Q14203 1278 aa27.97■■■□□ 2.07
CHD9-208ENST00000563410 PRELPP51888 382 aa27.96■■■□□ 2.07
CHD9-208ENST00000563410 PRR5LQ6MZQ0 368 aa27.96■■■□□ 2.07
CHD9-208ENST00000563410 TNRC6CQ9HCJ0 1690 aaKnown RBP27.96■■■□□ 2.07
CHD9-208ENST00000563410 PIP4K2AP48426 406 aaPredicted RBP27.95■■■□□ 2.06
CHD9-208ENST00000563410 HTATSF1O43719 755 aaKnown RBP27.94■■■□□ 2.06
CHD9-208ENST00000563410 CCDC24Q8N4L8 307 aa27.94■■■□□ 2.06
CHD9-208ENST00000563410 CACNA1SQ13698 1873 aa27.93■■■□□ 2.06
CHD9-208ENST00000563410 DZIP3Q86Y13 1208 aaKnown RBP27.93■■■□□ 2.06
CHD9-208ENST00000563410 BRIP1Q9BX63 1249 aa27.93■■■□□ 2.06
CHD9-208ENST00000563410 FER1L6Q2WGJ9 1857 aa27.93■■■□□ 2.06
CHD9-208ENST00000563410 KDM2BQ8NHM5 1336 aa27.92■■■□□ 2.06
CHD9-208ENST00000563410 TIAM2Q8IVF5 1701 aa27.92■■■□□ 2.06
CHD9-208ENST00000563410 SNRPA1P09661 255 aaKnown RBP27.92■■■□□ 2.06
CHD9-208ENST00000563410 NPM2Q86SE8 214 aaKnown RBP27.92■■■□□ 2.06
CHD9-208ENST00000563410 PDE6BP35913 854 aa27.91■■■□□ 2.06
CHD9-208ENST00000563410 SETDB2Q96T68 719 aa27.91■■■□□ 2.06
CHD9-208ENST00000563410 DICER1Q9UPY3 1922 aaKnown RBP27.9■■■□□ 2.06
CHD9-208ENST00000563410 NFKBIEO00221 500 aa27.9■■■□□ 2.06
CHD9-208ENST00000563410 LMNB1P20700 586 aa27.9■■■□□ 2.06
CHD9-208ENST00000563410 RBM46Q8TBY0 533 aaKnown RBP27.9■■■□□ 2.06
CHD9-208ENST00000563410 PDZRN3Q9UPQ7 1066 aa27.9■■■□□ 2.06
CHD9-208ENST00000563410 LAMB4A4D0S4 1761 aa27.9■■■□□ 2.06
CHD9-208ENST00000563410 ZC3H4Q9UPT8 1303 aaKnown RBP27.9■■■□□ 2.06
CHD9-208ENST00000563410 KDM3BQ7LBC6 1761 aa27.89■■■□□ 2.06
CHD9-208ENST00000563410 ARFGEF2Q9Y6D5 1785 aa27.89■■■□□ 2.06
CHD9-208ENST00000563410 APLP1P51693 650 aa27.89■■■□□ 2.06
CHD9-208ENST00000563410 ZNF622Q969S3 477 aaKnown RBP eCLIP27.89■■■□□ 2.06
CHD9-208ENST00000563410 RRAGCQ9HB90 399 aa27.89■■■□□ 2.06
CHD9-208ENST00000563410 SLX4Q8IY92 1834 aa27.89■■■□□ 2.06
CHD9-208ENST00000563410 TAF7Q15545 349 aaPredicted RBP27.88■■■□□ 2.05
CHD9-208ENST00000563410 WDR90Q96KV7 1748 aa27.87■■■□□ 2.05
CHD9-208ENST00000563410 NBPF26B4DH59 902 aa27.87■■■□□ 2.05
CHD9-208ENST00000563410 NBPF10Q6P3W6 841 aaKnown RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms