RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 AKAP4Q5JQC9 854 aa18.12■□□□□ 0.49
SPG7-207ENST00000563218 SLC52A2Q9HAB3 445 aa18.12■□□□□ 0.49
SPG7-207ENST00000563218 KIF7Q2M1P5 1343 aa18.12■□□□□ 0.49
SPG7-207ENST00000563218 COL3A1P02461 1466 aaPredicted RBP18.11■□□□□ 0.49
SPG7-207ENST00000563218 SOS1Q07889 1333 aaPredicted RBP18.1■□□□□ 0.49
SPG7-207ENST00000563218 POLRMTO00411 1230 aaKnown RBP18.1■□□□□ 0.49
SPG7-207ENST00000563218 C9orf131Q5VYM1 1079 aa18.1■□□□□ 0.49
SPG7-207ENST00000563218 USPL1Q5W0Q7 1092 aa18.1■□□□□ 0.49
SPG7-207ENST00000563218 RNMTO43148 476 aaKnown RBP18.09■□□□□ 0.49
SPG7-207ENST00000563218 DIEXFQ68CQ4 756 aaKnown RBP18.09■□□□□ 0.49
SPG7-207ENST00000563218 DICER1Q9UPY3 1922 aaKnown RBP18.09■□□□□ 0.49
SPG7-207ENST00000563218 BCORQ6W2J9 1755 aa18.09■□□□□ 0.49
SPG7-207ENST00000563218 COL15A1P39059 1388 aa18.08■□□□□ 0.49
SPG7-207ENST00000563218 CAPN15O75808 1086 aa18.08■□□□□ 0.48
SPG7-207ENST00000563218 CYP19A1P11511 503 aaPredicted RBP18.08■□□□□ 0.48
SPG7-207ENST00000563218 TM4SF1P30408 202 aa18.08■□□□□ 0.48
SPG7-207ENST00000563218 MTHFSDQ2M296 383 aaKnown RBP18.08■□□□□ 0.48
SPG7-207ENST00000563218 PIM2Q9P1W9 311 aa18.08■□□□□ 0.48
SPG7-207ENST00000563218 ZBTB1Q9Y2K1 713 aa18.08■□□□□ 0.48
SPG7-207ENST00000563218 CARMIL3Q8ND23 1372 aa18.06■□□□□ 0.48
SPG7-207ENST00000563218 DALRD3Q5D0E6 543 aaKnown RBP18.06■□□□□ 0.48
SPG7-207ENST00000563218 CC2D1BQ5T0F9 858 aaKnown RBP18.06■□□□□ 0.48
SPG7-207ENST00000563218 BCL2L12Q9HB09 334 aa18.06■□□□□ 0.48
SPG7-207ENST00000563218 FER1L6Q2WGJ9 1857 aa18.05■□□□□ 0.48
SPG7-207ENST00000563218 TOMM70O94826 608 aa18.05■□□□□ 0.48
SPG7-207ENST00000563218 ARFGEF2Q9Y6D5 1785 aa18.04■□□□□ 0.48
SPG7-207ENST00000563218 PER1O15534 1290 aaPredicted RBP18.04■□□□□ 0.48
SPG7-207ENST00000563218 ZPR1O75312 459 aa18.04■□□□□ 0.48
SPG7-207ENST00000563218 RASSF7Q02833 373 aa18.04■□□□□ 0.48
SPG7-207ENST00000563218 NFIXQ14938 502 aa18.04■□□□□ 0.48
SPG7-207ENST00000563218 RNF181Q9P0P0 153 aa18.04■□□□□ 0.48
SPG7-207ENST00000563218 APLP1P51693 650 aa18.03■□□□□ 0.48
SPG7-207ENST00000563218 PRELPP51888 382 aa18.03■□□□□ 0.48
SPG7-207ENST00000563218 HTRA3P83110 453 aa18.03■□□□□ 0.48
SPG7-207ENST00000563218 CNGB1Q14028 1251 aaPredicted RBP18.03■□□□□ 0.48
SPG7-207ENST00000563218 DIAPH1O60610 1272 aaKnown RBP18.02■□□□□ 0.48
SPG7-207ENST00000563218 NARFQ9UHQ1 456 aa18.02■□□□□ 0.48
SPG7-207ENST00000563218 PCNTO95613 3336 aa18.01■□□□□ 0.47
SPG7-207ENST00000563218 DNAJC5GQ8N7S2 189 aa18.01■□□□□ 0.47
SPG7-207ENST00000563218 CANXP27824 592 aaKnown RBP18■□□□□ 0.47
SPG7-207ENST00000563218 SLX4Q8IY92 1834 aa18■□□□□ 0.47
SPG7-207ENST00000563218 DLG5Q8TDM6 1919 aa18■□□□□ 0.47
SPG7-207ENST00000563218 SERPINB2P05120 415 aa17.99■□□□□ 0.47
SPG7-207ENST00000563218 RBM46Q8TBY0 533 aaKnown RBP17.99■□□□□ 0.47
SPG7-207ENST00000563218 RRAGCQ9HB90 399 aa17.99■□□□□ 0.47
SPG7-207ENST00000563218 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
SPG7-207ENST00000563218 DDX10Q13206 875 aaKnown RBP17.97■□□□□ 0.47
SPG7-207ENST00000563218 COL13A1Q5TAT6 717 aaPredicted RBP17.97■□□□□ 0.47
SPG7-207ENST00000563218 VSIG10Q8N0Z9 540 aa17.97■□□□□ 0.47
SPG7-207ENST00000563218 ZNF496Q96IT1 587 aaPredicted RBP17.97■□□□□ 0.47
SPG7-207ENST00000563218 HEG1Q9ULI3 1381 aa17.96■□□□□ 0.47
SPG7-207ENST00000563218 CCDC24Q8N4L8 307 aa17.96■□□□□ 0.47
SPG7-207ENST00000563218 IL17REQ8NFR9 667 aa17.96■□□□□ 0.47
SPG7-207ENST00000563218 KDM2BQ8NHM5 1336 aa17.96■□□□□ 0.46
SPG7-207ENST00000563218 U2SURPO15042 1029 aaKnown RBP17.95■□□□□ 0.46
SPG7-207ENST00000563218 EIF5P55010 431 aaKnown RBP17.95■□□□□ 0.46
SPG7-207ENST00000563218 TBC1D9BQ66K14 1250 aa17.95■□□□□ 0.46
SPG7-207ENST00000563218 C2CD5Q86YS7 1000 aa17.95■□□□□ 0.46
SPG7-207ENST00000563218 C16orf71Q8IYS4 520 aaPredicted RBP17.95■□□□□ 0.46
SPG7-207ENST00000563218 LAMB4A4D0S4 1761 aa17.94■□□□□ 0.46
SPG7-207ENST00000563218 NFKBIEO00221 500 aa17.94■□□□□ 0.46
SPG7-207ENST00000563218 TNS4Q8IZW8 715 aa17.94■□□□□ 0.46
SPG7-207ENST00000563218 TTC5Q8N0Z6 440 aa17.94■□□□□ 0.46
SPG7-207ENST00000563218 KCNQ3O43525 872 aa17.93■□□□□ 0.46
SPG7-207ENST00000563218 ZNF330Q9Y3S2 320 aaPredicted RBP17.93■□□□□ 0.46
SPG7-207ENST00000563218 NPC1L1Q9UHC9 1359 aa17.92■□□□□ 0.46
SPG7-207ENST00000563218 GNAT3A8MTJ3 354 aa17.92■□□□□ 0.46
SPG7-207ENST00000563218 ZNF790Q6PG37 636 aa17.92■□□□□ 0.46
SPG7-207ENST00000563218 TTLL6Q8N841 843 aa17.92■□□□□ 0.46
SPG7-207ENST00000563218 TBC1D2BQ9UPU7 963 aa17.92■□□□□ 0.46
SPG7-207ENST00000563218 CEMIPQ8WUJ3 1361 aa17.91■□□□□ 0.46
SPG7-207ENST00000563218 STARD3NLO95772 234 aa17.91■□□□□ 0.46
SPG7-207ENST00000563218 A1BGP04217 495 aa17.91■□□□□ 0.46
SPG7-207ENST00000563218 LMNB1P20700 586 aa17.91■□□□□ 0.46
SPG7-207ENST00000563218 TEFQ10587 303 aa17.91■□□□□ 0.46
SPG7-207ENST00000563218 FSTL1Q12841 308 aa17.91■□□□□ 0.46
SPG7-207ENST00000563218 PHACTR3Q96KR7 559 aa17.91■□□□□ 0.46
SPG7-207ENST00000563218 ZNF219Q9P2Y4 722 aaPredicted RBP17.91■□□□□ 0.46
SPG7-207ENST00000563218 KDM3BQ7LBC6 1761 aa17.9■□□□□ 0.46
SPG7-207ENST00000563218 PIP4K2AP48426 406 aaPredicted RBP17.9■□□□□ 0.46
SPG7-207ENST00000563218 PRR5LQ6MZQ0 368 aa17.9■□□□□ 0.46
SPG7-207ENST00000563218 KLRG1Q96E93 195 aa17.9■□□□□ 0.46
SPG7-207ENST00000563218 NUP98P52948 1817 aa17.89■□□□□ 0.45
SPG7-207ENST00000563218 PRAMEF22A3QJZ6 481 aa17.89■□□□□ 0.45
SPG7-207ENST00000563218 H0YIN7 160 aa17.89■□□□□ 0.45
SPG7-207ENST00000563218 GAS2L2Q8NHY3 880 aa17.89■□□□□ 0.45
SPG7-207ENST00000563218 GLTPD2A6NH11 291 aa17.88■□□□□ 0.45
SPG7-207ENST00000563218 CAMTA2O94983 1202 aa17.88■□□□□ 0.45
SPG7-207ENST00000563218 PRKAR2BP31323 418 aa17.88■□□□□ 0.45
SPG7-207ENST00000563218 ZNF622Q969S3 477 aaKnown RBP eCLIP17.88■□□□□ 0.451e-6■■□□□ 11.9
SPG7-207ENST00000563218 RSPH6AQ9H0K4 717 aa17.88■□□□□ 0.45
SPG7-207ENST00000563218 ZC3H4Q9UPT8 1303 aaKnown RBP17.88■□□□□ 0.45
SPG7-207ENST00000563218 A0A087WZG4 1122 aa17.87■□□□□ 0.45
SPG7-207ENST00000563218 POTECB2RU33 542 aa17.86■□□□□ 0.45
SPG7-207ENST00000563218 C21orf2O43822 256 aa17.86■□□□□ 0.45
SPG7-207ENST00000563218 IL6STP40189 918 aaPredicted RBP17.86■□□□□ 0.45
SPG7-207ENST00000563218 SMC1BQ8NDV3 1235 aa17.86■□□□□ 0.45
SPG7-207ENST00000563218 FMNL2Q96PY5 1086 aa17.86■□□□□ 0.45
SPG7-207ENST00000563218 JMYQ8N9B5 988 aa17.85■□□□□ 0.45
SPG7-207ENST00000563218 BTBD11A6QL63 1104 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms