RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 COL15A1P39059 1388 aa28.62■■■□□ 2.17
GGA2-204ENST00000563047 UBR2Q8IWV8 1755 aa28.61■■■□□ 2.17
GGA2-204ENST00000563047 VSIG10Q8N0Z9 540 aa28.61■■■□□ 2.17
GGA2-204ENST00000563047 NARFQ9UHQ1 456 aa28.61■■■□□ 2.17
GGA2-204ENST00000563047 CNGB1Q14028 1251 aaPredicted RBP28.6■■■□□ 2.17
GGA2-204ENST00000563047 DALRD3Q5D0E6 543 aaKnown RBP28.6■■■□□ 2.17
GGA2-204ENST00000563047 C9orf131Q5VYM1 1079 aa28.59■■■□□ 2.17
GGA2-204ENST00000563047 NFIXQ14938 502 aa28.58■■■□□ 2.17
GGA2-204ENST00000563047 BCL2L12Q9HB09 334 aa28.58■■■□□ 2.17
GGA2-204ENST00000563047 AFDNP55196 1824 aaKnown RBP28.57■■■□□ 2.16
GGA2-204ENST00000563047 U2SURPO15042 1029 aaKnown RBP28.57■■■□□ 2.16
GGA2-204ENST00000563047 NMRK2Q9NPI5 230 aa28.56■■■□□ 2.16
GGA2-204ENST00000563047 NRXN2Q9P2S2 1712 aa28.56■■■□□ 2.16
GGA2-204ENST00000563047 IL17REQ8NFR9 667 aa28.55■■■□□ 2.16
GGA2-204ENST00000563047 CANXP27824 592 aaKnown RBP28.54■■■□□ 2.16
GGA2-204ENST00000563047 TTC5Q8N0Z6 440 aa28.54■■■□□ 2.16
GGA2-204ENST00000563047 GNAT3A8MTJ3 354 aa28.53■■■□□ 2.16
GGA2-204ENST00000563047 TOMM70O94826 608 aa28.53■■■□□ 2.16
GGA2-204ENST00000563047 GAS2L2Q8NHY3 880 aa28.53■■■□□ 2.16
GGA2-204ENST00000563047 ZNF496Q96IT1 587 aaPredicted RBP28.52■■■□□ 2.16
GGA2-204ENST00000563047 STARD3NLO95772 234 aa28.51■■■□□ 2.15
GGA2-204ENST00000563047 SERPINB2P05120 415 aa28.51■■■□□ 2.15
GGA2-204ENST00000563047 EIF5P55010 431 aaKnown RBP28.51■■■□□ 2.15
GGA2-204ENST00000563047 TEFQ10587 303 aa28.51■■■□□ 2.15
GGA2-204ENST00000563047 ZNF790Q6PG37 636 aa28.51■■■□□ 2.15
GGA2-204ENST00000563047 SIPA1L3O60292 1781 aaPredicted RBP28.51■■■□□ 2.15
GGA2-204ENST00000563047 RNF181Q9P0P0 153 aa28.5■■■□□ 2.15
GGA2-204ENST00000563047 HEG1Q9ULI3 1381 aa28.5■■■□□ 2.15
GGA2-204ENST00000563047 SBF1O95248 1867 aa28.49■■■□□ 2.15
GGA2-204ENST00000563047 DLEC1Q9Y238 1755 aa28.47■■■□□ 2.15
GGA2-204ENST00000563047 PHACTR3Q96KR7 559 aa28.46■■■□□ 2.15
GGA2-204ENST00000563047 CARMIL3Q8ND23 1372 aa28.46■■■□□ 2.15
GGA2-204ENST00000563047 CEMIPQ8WUJ3 1361 aa28.46■■■□□ 2.15
GGA2-204ENST00000563047 A0A087WZG4 1122 aa28.45■■■□□ 2.14
GGA2-204ENST00000563047 APLP1P51693 650 aa28.45■■■□□ 2.14
GGA2-204ENST00000563047 BICDL1Q6ZP65 573 aa28.45■■■□□ 2.14
GGA2-204ENST00000563047 TEX13AQ9BXU3 409 aaPredicted RBP28.45■■■□□ 2.14
GGA2-204ENST00000563047 PRKAR2BP31323 418 aa28.44■■■□□ 2.14
GGA2-204ENST00000563047 RASSF7Q02833 373 aa28.44■■■□□ 2.14
GGA2-204ENST00000563047 RSPH6AQ9H0K4 717 aa28.44■■■□□ 2.14
GGA2-204ENST00000563047 TBC1D9BQ66K14 1250 aa28.43■■■□□ 2.14
GGA2-204ENST00000563047 RBM46Q8TBY0 533 aaKnown RBP28.43■■■□□ 2.14
GGA2-204ENST00000563047 KDM2BQ8NHM5 1336 aa28.43■■■□□ 2.14
GGA2-204ENST00000563047 C2CD5Q86YS7 1000 aa28.42■■■□□ 2.14
GGA2-204ENST00000563047 TTLL6Q8N841 843 aa28.42■■■□□ 2.14
GGA2-204ENST00000563047 FMNL2Q96PY5 1086 aa28.42■■■□□ 2.14
GGA2-204ENST00000563047 SCN7AQ01118 1682 aa28.42■■■□□ 2.14
GGA2-204ENST00000563047 KCNQ3O43525 872 aa28.41■■■□□ 2.14
GGA2-204ENST00000563047 CFAP53Q96M91 514 aa28.41■■■□□ 2.14
GGA2-204ENST00000563047 TBC1D2BQ9UPU7 963 aa28.41■■■□□ 2.14
GGA2-204ENST00000563047 ZNF330Q9Y3S2 320 aaPredicted RBP28.41■■■□□ 2.14
GGA2-204ENST00000563047 A1BGP04217 495 aa28.4■■■□□ 2.14
GGA2-204ENST00000563047 IL6STP40189 918 aaPredicted RBP28.4■■■□□ 2.14
GGA2-204ENST00000563047 PRELPP51888 382 aa28.4■■■□□ 2.14
GGA2-204ENST00000563047 H0YIN7 160 aa28.39■■■□□ 2.14
GGA2-204ENST00000563047 IFFO2Q5TF58 517 aa28.39■■■□□ 2.14
GGA2-204ENST00000563047 C16orf71Q8IYS4 520 aaPredicted RBP28.39■■■□□ 2.14
GGA2-204ENST00000563047 RRAGCQ9HB90 399 aa28.39■■■□□ 2.14
GGA2-204ENST00000563047 ANKRD31Q8N7Z5 1873 aa28.38■■■□□ 2.13
GGA2-204ENST00000563047 BTBD11A6QL63 1104 aa28.38■■■□□ 2.13
GGA2-204ENST00000563047 DNAJC5GQ8N7S2 189 aa28.38■■■□□ 2.13
GGA2-204ENST00000563047 TNRC6CQ9HCJ0 1690 aaKnown RBP28.37■■■□□ 2.13
GGA2-204ENST00000563047 LMNB1P20700 586 aa28.36■■■□□ 2.13
GGA2-204ENST00000563047 NUDCQ9Y266 331 aa28.36■■■□□ 2.13
GGA2-204ENST00000563047 ZC3H4Q9UPT8 1303 aaKnown RBP28.36■■■□□ 2.13
GGA2-204ENST00000563047 CAMTA2O94983 1202 aa28.35■■■□□ 2.13
GGA2-204ENST00000563047 PPP2R1AP30153 589 aa28.35■■■□□ 2.13
GGA2-204ENST00000563047 PRR5LQ6MZQ0 368 aa28.35■■■□□ 2.13
GGA2-204ENST00000563047 CCDC24Q8N4L8 307 aa28.35■■■□□ 2.13
GGA2-204ENST00000563047 BRIP1Q9BX63 1249 aa28.34■■■□□ 2.13
GGA2-204ENST00000563047 USP16Q9Y5T5 823 aa28.34■■■□□ 2.13
GGA2-204ENST00000563047 WDR90Q96KV7 1748 aa28.33■■■□□ 2.13
GGA2-204ENST00000563047 NFKBIEO00221 500 aa28.33■■■□□ 2.13
GGA2-204ENST00000563047 U2AF1L5P0DN76 240 aaPredicted RBP28.33■■■□□ 2.13
GGA2-204ENST00000563047 U2AF1Q01081 240 aaKnown RBP eCLIP28.33■■■□□ 2.134e-8■□□□□ 11.1
GGA2-204ENST00000563047 FSTL1Q12841 308 aa28.33■■■□□ 2.13
GGA2-204ENST00000563047 CCDC88AQ3V6T2 1871 aa28.32■■■□□ 2.12
GGA2-204ENST00000563047 PRAMEF22A3QJZ6 481 aa28.32■■■□□ 2.12
GGA2-204ENST00000563047 PDE6BP35913 854 aa28.32■■■□□ 2.12
GGA2-204ENST00000563047 MCM10Q7L590 875 aa28.32■■■□□ 2.12
GGA2-204ENST00000563047 ZNF622Q969S3 477 aaKnown RBP eCLIP28.32■■■□□ 2.12
GGA2-204ENST00000563047 COL11A2P13942 1736 aaPredicted RBP28.32■■■□□ 2.12
GGA2-204ENST00000563047 PIP4K2AP48426 406 aaPredicted RBP28.31■■■□□ 2.12
GGA2-204ENST00000563047 NPM2Q86SE8 214 aaKnown RBP28.31■■■□□ 2.12
GGA2-204ENST00000563047 PDZRN3Q9UPQ7 1066 aa28.31■■■□□ 2.12
GGA2-204ENST00000563047 BCORQ6W2J9 1755 aa28.31■■■□□ 2.12
GGA2-204ENST00000563047 GLTPD2A6NH11 291 aa28.3■■■□□ 2.12
GGA2-204ENST00000563047 DZIP3Q86Y13 1208 aaKnown RBP28.3■■■□□ 2.12
GGA2-204ENST00000563047 SETDB2Q96T68 719 aa28.3■■■□□ 2.12
GGA2-204ENST00000563047 TIAM2Q8IVF5 1701 aa28.29■■■□□ 2.12
GGA2-204ENST00000563047 HTRA3P83110 453 aa28.29■■■□□ 2.12
GGA2-204ENST00000563047 RTF1Q92541 710 aaKnown RBP28.29■■■□□ 2.12
GGA2-204ENST00000563047 C21orf2O43822 256 aa28.27■■■□□ 2.12
GGA2-204ENST00000563047 DCTN1Q14203 1278 aa28.27■■■□□ 2.12
GGA2-204ENST00000563047 CNBD1Q8NA66 436 aa28.27■■■□□ 2.12
GGA2-204ENST00000563047 ZNF219Q9P2Y4 722 aaPredicted RBP28.27■■■□□ 2.12
GGA2-204ENST00000563047 SNRPA1P09661 255 aaKnown RBP28.26■■■□□ 2.11
GGA2-204ENST00000563047 FER1L6Q2WGJ9 1857 aa28.25■■■□□ 2.11
GGA2-204ENST00000563047 VEGFAP15692 232 aaPredicted RBP28.24■■■□□ 2.11
GGA2-204ENST00000563047 SMC1BQ8NDV3 1235 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms