RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 NFIXQ14938 502 aa22.41■■□□□ 1.18
CMTM3-205ENST00000562707 ZBTB1Q9Y2K1 713 aa22.41■■□□□ 1.18
CMTM3-205ENST00000562707 COL15A1P39059 1388 aa22.4■■□□□ 1.18
CMTM3-205ENST00000562707 TTC5Q8N0Z6 440 aa22.4■■□□□ 1.18
CMTM3-205ENST00000562707 TJP1Q07157 1748 aa22.4■■□□□ 1.18
CMTM3-205ENST00000562707 PER1O15534 1290 aaPredicted RBP22.39■■□□□ 1.17
CMTM3-205ENST00000562707 STARD3NLO95772 234 aa22.39■■□□□ 1.17
CMTM3-205ENST00000562707 SERPINB2P05120 415 aa22.39■■□□□ 1.17
CMTM3-205ENST00000562707 CANXP27824 592 aaKnown RBP22.39■■□□□ 1.17
CMTM3-205ENST00000562707 MRC1P22897 1456 aa22.37■■□□□ 1.17
CMTM3-205ENST00000562707 FSTL1Q12841 308 aa22.37■■□□□ 1.17
CMTM3-205ENST00000562707 DNAJC5GQ8N7S2 189 aa22.37■■□□□ 1.17
CMTM3-205ENST00000562707 RRAGCQ9HB90 399 aa22.37■■□□□ 1.17
CMTM3-205ENST00000562707 SCN11AQ9UI33 1791 aa22.36■■□□□ 1.17
CMTM3-205ENST00000562707 A0A087WZG4 1122 aa22.36■■□□□ 1.17
CMTM3-205ENST00000562707 U2SURPO15042 1029 aaKnown RBP22.36■■□□□ 1.17
CMTM3-205ENST00000562707 TEFQ10587 303 aa22.36■■□□□ 1.17
CMTM3-205ENST00000562707 BCL2L12Q9HB09 334 aa22.36■■□□□ 1.17
CMTM3-205ENST00000562707 H0YIN7 160 aa22.35■■□□□ 1.17
CMTM3-205ENST00000562707 C2CD5Q86YS7 1000 aa22.35■■□□□ 1.17
CMTM3-205ENST00000562707 TTLL6Q8N841 843 aa22.35■■□□□ 1.17
CMTM3-205ENST00000562707 GAS2L2Q8NHY3 880 aa22.34■■□□□ 1.17
CMTM3-205ENST00000562707 TEX13AQ9BXU3 409 aaPredicted RBP22.34■■□□□ 1.17
CMTM3-205ENST00000562707 KCPQ6ZWJ8 1503 aa22.34■■□□□ 1.17
CMTM3-205ENST00000562707 GNAT3A8MTJ3 354 aa22.33■■□□□ 1.17
CMTM3-205ENST00000562707 EIF5P55010 431 aaKnown RBP22.33■■□□□ 1.17
CMTM3-205ENST00000562707 RASSF7Q02833 373 aa22.33■■□□□ 1.17
CMTM3-205ENST00000562707 CNGB1Q14028 1251 aaPredicted RBP22.33■■□□□ 1.17
CMTM3-205ENST00000562707 BICDL1Q6ZP65 573 aa22.33■■□□□ 1.17
CMTM3-205ENST00000562707 ZC3H4Q9UPT8 1303 aaKnown RBP22.32■■□□□ 1.16
CMTM3-205ENST00000562707 BRCA1P38398 1863 aaKnown RBP22.32■■□□□ 1.16
CMTM3-205ENST00000562707 LMNB1P20700 586 aa22.32■■□□□ 1.16
CMTM3-205ENST00000562707 ADAMTS7Q9UKP4 1686 aa22.31■■□□□ 1.16
CMTM3-205ENST00000562707 ZNF790Q6PG37 636 aa22.31■■□□□ 1.16
CMTM3-205ENST00000562707 NPM2Q86SE8 214 aaKnown RBP22.31■■□□□ 1.16
CMTM3-205ENST00000562707 IL17REQ8NFR9 667 aa22.31■■□□□ 1.16
CMTM3-205ENST00000562707 ZNF496Q96IT1 587 aaPredicted RBP22.31■■□□□ 1.16
CMTM3-205ENST00000562707 ARFGEF1Q9Y6D6 1849 aa22.31■■□□□ 1.16
CMTM3-205ENST00000562707 ZNF330Q9Y3S2 320 aaPredicted RBP22.3■■□□□ 1.16
CMTM3-205ENST00000562707 HEG1Q9ULI3 1381 aa22.29■■□□□ 1.16
CMTM3-205ENST00000562707 SMC1BQ8NDV3 1235 aa22.29■■□□□ 1.16
CMTM3-205ENST00000562707 PDZRN3Q9UPQ7 1066 aa22.29■■□□□ 1.16
CMTM3-205ENST00000562707 NPC1L1Q9UHC9 1359 aa22.28■■□□□ 1.16
CMTM3-205ENST00000562707 TBC1D9BQ66K14 1250 aa22.28■■□□□ 1.16
CMTM3-205ENST00000562707 KLRG1Q96E93 195 aa22.28■■□□□ 1.16
CMTM3-205ENST00000562707 GLTPD2A6NH11 291 aa22.27■■□□□ 1.16
CMTM3-205ENST00000562707 VEGFAP15692 232 aaPredicted RBP22.27■■□□□ 1.16
CMTM3-205ENST00000562707 PDE6BP35913 854 aa22.27■■□□□ 1.16
CMTM3-205ENST00000562707 IL6STP40189 918 aaPredicted RBP22.27■■□□□ 1.16
CMTM3-205ENST00000562707 HTRA3P83110 453 aa22.27■■□□□ 1.16
CMTM3-205ENST00000562707 ZNF622Q969S3 477 aaKnown RBP eCLIP22.27■■□□□ 1.16
CMTM3-205ENST00000562707 FMNL2Q96PY5 1086 aa22.27■■□□□ 1.16
CMTM3-205ENST00000562707 TBC1D2BQ9UPU7 963 aa22.27■■□□□ 1.16
CMTM3-205ENST00000562707 BRIP1Q9BX63 1249 aa22.26■■□□□ 1.15
CMTM3-205ENST00000562707 CFAP53Q96M91 514 aa22.25■■□□□ 1.15
CMTM3-205ENST00000562707 CARMIL3Q8ND23 1372 aa22.25■■□□□ 1.15
CMTM3-205ENST00000562707 NPHP1O15259 732 aa22.24■■□□□ 1.15
CMTM3-205ENST00000562707 PRELPP51888 382 aa22.24■■□□□ 1.15
CMTM3-205ENST00000562707 BTBD11A6QL63 1104 aa22.23■■□□□ 1.15
CMTM3-205ENST00000562707 NFKBIEO00221 500 aa22.23■■□□□ 1.15
CMTM3-205ENST00000562707 A1BGP04217 495 aa22.23■■□□□ 1.15
CMTM3-205ENST00000562707 PRR5LQ6MZQ0 368 aa22.23■■□□□ 1.15
CMTM3-205ENST00000562707 DPY19L2Q6NUT2 758 aa22.23■■□□□ 1.15
CMTM3-205ENST00000562707 SETDB2Q96T68 719 aa22.23■■□□□ 1.15
CMTM3-205ENST00000562707 COL3A1P02461 1466 aaPredicted RBP22.22■■□□□ 1.15
CMTM3-205ENST00000562707 CCDC24Q8N4L8 307 aa22.22■■□□□ 1.15
CMTM3-205ENST00000562707 ZNF219Q9P2Y4 722 aaPredicted RBP22.22■■□□□ 1.15
CMTM3-205ENST00000562707 NUDCQ9Y266 331 aa22.22■■□□□ 1.15
CMTM3-205ENST00000562707 NRXN2Q9P2S2 1712 aa22.22■■□□□ 1.15
CMTM3-205ENST00000562707 C21orf2O43822 256 aa22.21■■□□□ 1.15
CMTM3-205ENST00000562707 PRKAR2BP31323 418 aa22.21■■□□□ 1.15
CMTM3-205ENST00000562707 JMYQ8N9B5 988 aa22.21■■□□□ 1.15
CMTM3-205ENST00000562707 CNBD1Q8NA66 436 aa22.2■■□□□ 1.14
CMTM3-205ENST00000562707 PHACTR3Q96KR7 559 aa22.2■■□□□ 1.14
CMTM3-205ENST00000562707 KCNQ3O43525 872 aa22.19■■□□□ 1.14
CMTM3-205ENST00000562707 CAMTA2O94983 1202 aa22.19■■□□□ 1.14
CMTM3-205ENST00000562707 ST5P78524 1137 aa22.19■■□□□ 1.14
CMTM3-205ENST00000562707 DZIP3Q86Y13 1208 aaKnown RBP22.19■■□□□ 1.14
CMTM3-205ENST00000562707 RTF1Q92541 710 aaKnown RBP22.19■■□□□ 1.14
CMTM3-205ENST00000562707 CEMIPQ8WUJ3 1361 aa22.19■■□□□ 1.14
CMTM3-205ENST00000562707 AFDNP55196 1824 aaKnown RBP22.18■■□□□ 1.14
CMTM3-205ENST00000562707 ERFEQ4G0M1 354 aa22.18■■□□□ 1.14
CMTM3-205ENST00000562707 CNKSR1Q969H4 720 aa22.18■■□□□ 1.14
CMTM3-205ENST00000562707 RSPH6AQ9H0K4 717 aa22.18■■□□□ 1.14
CMTM3-205ENST00000562707 UBR2Q8IWV8 1755 aa22.17■■□□□ 1.14
CMTM3-205ENST00000562707 USP16Q9Y5T5 823 aa22.17■■□□□ 1.14
CMTM3-205ENST00000562707 WDR90Q96KV7 1748 aa22.17■■□□□ 1.14
CMTM3-205ENST00000562707 TNRC6CQ9HCJ0 1690 aaKnown RBP22.17■■□□□ 1.14
CMTM3-205ENST00000562707 STYK1Q6J9G0 422 aa22.16■■□□□ 1.14
CMTM3-205ENST00000562707 SNRPA1P09661 255 aaKnown RBP22.15■■□□□ 1.14
CMTM3-205ENST00000562707 U2AF1L5P0DN76 240 aaPredicted RBP22.15■■□□□ 1.14
CMTM3-205ENST00000562707 U2AF1Q01081 240 aaKnown RBP eCLIP22.15■■□□□ 1.14
CMTM3-205ENST00000562707 SOGA3Q5TF21 947 aa22.15■■□□□ 1.14
CMTM3-205ENST00000562707 TAOK3Q9H2K8 898 aa22.15■■□□□ 1.14
CMTM3-205ENST00000562707 SBF1O95248 1867 aa22.15■■□□□ 1.14
CMTM3-205ENST00000562707 SRGNP10124 158 aa22.14■■□□□ 1.13
CMTM3-205ENST00000562707 CLEC4GQ6UXB4 293 aa22.14■■□□□ 1.13
CMTM3-205ENST00000562707 MASTLQ96GX5 879 aa22.14■■□□□ 1.13
CMTM3-205ENST00000562707 ZNF652Q9Y2D9 606 aa22.14■■□□□ 1.13
CMTM3-205ENST00000562707 LTBP3Q9NS15 1303 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms