RNA–Protein interactions for RNA: ENST00000562570.1

AC009041.2-203, humanhuman

TSL 1 (best)

Gene AC009041.2, Length 3,222 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-203ENST00000562570 MAP3K5Q99683 1374 aa21.6■■□□□ 1.05
AC009041.2-203ENST00000562570 ATP8B2P98198 1209 aa21.6■■□□□ 1.05
AC009041.2-203ENST00000562570 L1TD1Q5T7N2 865 aaKnown RBP21.6■■□□□ 1.05
AC009041.2-203ENST00000562570 DLG5Q8TDM6 1919 aa21.6■■□□□ 1.05
AC009041.2-203ENST00000562570 BOLA2Q9H3K6 86 aa21.59■■□□□ 1.05
AC009041.2-203ENST00000562570 RHPN1Q8TCX5 695 aa21.59■■□□□ 1.05
AC009041.2-203ENST00000562570 NAP1L2Q9ULW6 460 aaPredicted RBP21.59■■□□□ 1.05
AC009041.2-203ENST00000562570 EIF4A1P60842 406 aaKnown RBP21.59■■□□□ 1.05
AC009041.2-203ENST00000562570 RAB3GAP1Q15042 981 aa21.59■■□□□ 1.05
AC009041.2-203ENST00000562570 ARID3AQ99856 593 aa21.59■■□□□ 1.05
AC009041.2-203ENST00000562570 STRN4Q9NRL3 753 aa21.59■■□□□ 1.05
AC009041.2-203ENST00000562570 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.59■■□□□ 1.05
AC009041.2-203ENST00000562570 RGS12O14924 1447 aa21.58■■□□□ 1.05
AC009041.2-203ENST00000562570 RAPGEF4Q8WZA2 1011 aa21.58■■□□□ 1.05
AC009041.2-203ENST00000562570 TMX3Q96JJ7 454 aa21.58■■□□□ 1.05
AC009041.2-203ENST00000562570 NSFL1CQ9UNZ2 370 aaKnown RBP21.58■■□□□ 1.04
AC009041.2-203ENST00000562570 PLEKHO1Q53GL0 409 aaPredicted RBP21.57■■□□□ 1.04
AC009041.2-203ENST00000562570 AACSQ86V21 672 aa21.57■■□□□ 1.04
AC009041.2-203ENST00000562570 IP6K1Q92551 441 aa21.57■■□□□ 1.04
AC009041.2-203ENST00000562570 ESYT1Q9BSJ8 1104 aa21.57■■□□□ 1.04
AC009041.2-203ENST00000562570 SRCAPQ6ZRS2 3230 aa21.57■■□□□ 1.04
AC009041.2-203ENST00000562570 CHMLP26374 656 aa21.56■■□□□ 1.04
AC009041.2-203ENST00000562570 KIAA1211Q6ZU35 1233 aa21.56■■□□□ 1.04
AC009041.2-203ENST00000562570 SIRT1Q96EB6 747 aa21.56■■□□□ 1.04
AC009041.2-203ENST00000562570 IFIT2P09913 472 aaKnown RBP21.56■■□□□ 1.04
AC009041.2-203ENST00000562570 SNX21Q969T3 373 aa21.56■■□□□ 1.04
AC009041.2-203ENST00000562570 STK3Q13188 491 aa21.55■■□□□ 1.04
AC009041.2-203ENST00000562570 RGPD8O14715 1765 aaPredicted RBP21.55■■□□□ 1.04
AC009041.2-203ENST00000562570 DIAPH3Q9NSV4 1193 aa21.55■■□□□ 1.04
AC009041.2-203ENST00000562570 SLFNL1Q499Z3 407 aa21.54■■□□□ 1.04
AC009041.2-203ENST00000562570 MYD88Q99836 296 aa21.54■■□□□ 1.04
AC009041.2-203ENST00000562570 SYCE3A1L190 88 aa21.53■■□□□ 1.04
AC009041.2-203ENST00000562570 TLR7Q9NYK1 1049 aaKnown RBP21.53■■□□□ 1.04
AC009041.2-203ENST00000562570 COL9A3Q14050 684 aaPredicted RBP21.53■■□□□ 1.04
AC009041.2-203ENST00000562570 MCCP23508 829 aa21.53■■□□□ 1.04
AC009041.2-203ENST00000562570 PRPF40BQ6NWY9 871 aaKnown RBP21.53■■□□□ 1.04
AC009041.2-203ENST00000562570 COPS6Q7L5N1 327 aa21.52■■□□□ 1.04
AC009041.2-203ENST00000562570 FERMT3Q86UX7 667 aa21.52■■□□□ 1.04
AC009041.2-203ENST00000562570 USP16Q9Y5T5 823 aa21.52■■□□□ 1.04
AC009041.2-203ENST00000562570 NECAB1Q8N987 351 aa21.52■■□□□ 1.04
AC009041.2-203ENST00000562570 DNAJC2Q99543 621 aaKnown RBP21.52■■□□□ 1.04
AC009041.2-203ENST00000562570 ARHGEF10O15013 1369 aa21.52■■□□□ 1.03
AC009041.2-203ENST00000562570 KIAA0232Q92628 1395 aa21.52■■□□□ 1.03
AC009041.2-203ENST00000562570 KDM4AO75164 1064 aa21.51■■□□□ 1.03
AC009041.2-203ENST00000562570 ATF3P18847 181 aa21.51■■□□□ 1.03
AC009041.2-203ENST00000562570 RASEFQ8IZ41 740 aa21.51■■□□□ 1.03
AC009041.2-203ENST00000562570 CLASRPQ8N2M8 674 aaKnown RBP21.51■■□□□ 1.03
AC009041.2-203ENST00000562570 RNMTO43148 476 aaKnown RBP21.51■■□□□ 1.03
AC009041.2-203ENST00000562570 XAGE3Q8WTP9 111 aa21.5■■□□□ 1.03
AC009041.2-203ENST00000562570 BICC1Q9H694 974 aaKnown RBP21.5■■□□□ 1.03
AC009041.2-203ENST00000562570 CASTP20810 708 aaKnown RBP21.5■■□□□ 1.03
AC009041.2-203ENST00000562570 ARHGAP23Q9P227 1491 aa21.5■■□□□ 1.03
AC009041.2-203ENST00000562570 FAM227BQ96M60 508 aa21.5■■□□□ 1.03
AC009041.2-203ENST00000562570 UBE3BQ7Z3V4 1068 aa21.49■■□□□ 1.03
AC009041.2-203ENST00000562570 NEUROD6Q96NK8 337 aa21.49■■□□□ 1.03
AC009041.2-203ENST00000562570 PEAK1Q9H792 1746 aa21.49■■□□□ 1.03
AC009041.2-203ENST00000562570 VPS37CA5D8V6 355 aaPredicted RBP21.49■■□□□ 1.03
AC009041.2-203ENST00000562570 FIBPO43427 364 aa21.49■■□□□ 1.03
AC009041.2-203ENST00000562570 FAM173BQ6P4H8 233 aa21.49■■□□□ 1.03
AC009041.2-203ENST00000562570 NPHP4O75161 1426 aaPredicted RBP21.49■■□□□ 1.03
AC009041.2-203ENST00000562570 USP31Q70CQ4 1352 aa21.48■■□□□ 1.03
AC009041.2-203ENST00000562570 FAM177BA6PVY3 158 aa21.48■■□□□ 1.03
AC009041.2-203ENST00000562570 BEND3Q5T5X7 828 aa21.48■■□□□ 1.03
AC009041.2-203ENST00000562570 TTC5Q8N0Z6 440 aa21.48■■□□□ 1.03
AC009041.2-203ENST00000562570 SYTL4Q96C24 671 aaPredicted RBP21.48■■□□□ 1.03
AC009041.2-203ENST00000562570 SUCLG2Q96I99 432 aa21.48■■□□□ 1.03
AC009041.2-203ENST00000562570 ZNF496Q96IT1 587 aaPredicted RBP21.48■■□□□ 1.03
AC009041.2-203ENST00000562570 LRRC2Q9BYS8 371 aa21.48■■□□□ 1.03
AC009041.2-203ENST00000562570 NASPP49321 788 aaPredicted RBP21.48■■□□□ 1.03
AC009041.2-203ENST00000562570 G3BP1Q13283 466 aaKnown RBP eCLIP21.48■■□□□ 1.03
AC009041.2-203ENST00000562570 CCDC83Q8IWF9 413 aa21.48■■□□□ 1.03
AC009041.2-203ENST00000562570 DBF4Q9UBU7 674 aaPredicted RBP21.48■■□□□ 1.03
AC009041.2-203ENST00000562570 PTH1RQ03431 593 aa21.47■■□□□ 1.03
AC009041.2-203ENST00000562570 ANP32BQ92688 251 aaKnown RBP21.47■■□□□ 1.03
AC009041.2-203ENST00000562570 JAKMIP1Q96N16 626 aaKnown RBP21.47■■□□□ 1.03
AC009041.2-203ENST00000562570 ZBTB3Q9H5J0 574 aa21.47■■□□□ 1.03
AC009041.2-203ENST00000562570 ZDHHC9Q9Y397 364 aa21.47■■□□□ 1.03
AC009041.2-203ENST00000562570 SLIT1O75093 1534 aa21.47■■□□□ 1.03
AC009041.2-203ENST00000562570 KNDC1Q76NI1 1749 aa21.46■■□□□ 1.03
AC009041.2-203ENST00000562570 GIGYF1O75420 1035 aaPredicted RBP21.46■■□□□ 1.03
AC009041.2-203ENST00000562570 PRIM1P49642 420 aaKnown RBP21.46■■□□□ 1.03
AC009041.2-203ENST00000562570 MRE11P49959 708 aa21.46■■□□□ 1.03
AC009041.2-203ENST00000562570 ADCK5Q3MIX3 580 aa21.46■■□□□ 1.03
AC009041.2-203ENST00000562570 TECPR2O15040 1411 aa21.45■■□□□ 1.02
AC009041.2-203ENST00000562570 KIF1BPQ96EK5 621 aa21.45■■□□□ 1.02
AC009041.2-203ENST00000562570 FSD1Q9BTV5 496 aa21.45■■□□□ 1.02
AC009041.2-203ENST00000562570 BCL11BQ9C0K0 894 aaPredicted RBP21.45■■□□□ 1.02
AC009041.2-203ENST00000562570 ADAMTSL3P82987 1691 aa21.45■■□□□ 1.02
AC009041.2-203ENST00000562570 GADD45BO75293 160 aaPredicted RBP21.45■■□□□ 1.02
AC009041.2-203ENST00000562570 AKAP4Q5JQC9 854 aa21.45■■□□□ 1.02
AC009041.2-203ENST00000562570 KCNH5Q8NCM2 988 aa21.45■■□□□ 1.02
AC009041.2-203ENST00000562570 SETD1AO15047 1707 aaKnown RBP21.43■■□□□ 1.02
AC009041.2-203ENST00000562570 EPHA10Q5JZY3 1008 aa21.43■■□□□ 1.02
AC009041.2-203ENST00000562570 CCDC129Q6ZRS4 1044 aa21.43■■□□□ 1.02
AC009041.2-203ENST00000562570 CNTROBQ8N137 903 aa21.43■■□□□ 1.02
AC009041.2-203ENST00000562570 ANKRD26Q9UPS8 1709 aa21.43■■□□□ 1.02
AC009041.2-203ENST00000562570 TOM1L2Q6ZVM7 507 aa21.43■■□□□ 1.02
AC009041.2-203ENST00000562570 ARHGEF25Q86VW2 580 aa21.43■■□□□ 1.02
AC009041.2-203ENST00000562570 NUCB2P80303 420 aa21.42■■□□□ 1.02
AC009041.2-203ENST00000562570 TAF6LQ9Y6J9 622 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms