RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 GNAI2P04899 355 aa20.73■□□□□ 0.91
PKD1-225ENST00000562297 GNAI3P08754 354 aa20.73■□□□□ 0.91
PKD1-225ENST00000562297 BEND3Q5T5X7 828 aa20.73■□□□□ 0.91
PKD1-225ENST00000562297 ANKRD45Q5TZF3 282 aa20.73■□□□□ 0.91
PKD1-225ENST00000562297 TTC5Q8N0Z6 440 aa20.73■□□□□ 0.91
PKD1-225ENST00000562297 DDX54Q8TDD1 881 aaKnown RBP20.72■□□□□ 0.91
PKD1-225ENST00000562297 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
PKD1-225ENST00000562297 SNRPA1P09661 255 aaKnown RBP20.71■□□□□ 0.91
PKD1-225ENST00000562297 SRCIN1Q9C0H9 1055 aa20.71■□□□□ 0.91
PKD1-225ENST00000562297 KCPQ6ZWJ8 1503 aa20.71■□□□□ 0.91
PKD1-225ENST00000562297 ITGB4P16144 1822 aa20.71■□□□□ 0.91
PKD1-225ENST00000562297 PIP4K2BP78356 416 aa20.71■□□□□ 0.91
PKD1-225ENST00000562297 ANP32AP39687 249 aaKnown RBP20.7■□□□□ 0.9
PKD1-225ENST00000562297 KSR2Q6VAB6 950 aa20.7■□□□□ 0.9
PKD1-225ENST00000562297 LRP10Q7Z4F1 713 aa20.7■□□□□ 0.9
PKD1-225ENST00000562297 USP16Q9Y5T5 823 aa20.7■□□□□ 0.9
PKD1-225ENST00000562297 TNS2Q63HR2 1409 aa20.69■□□□□ 0.9
PKD1-225ENST00000562297 NWD2Q9ULI1 1742 aa20.69■□□□□ 0.9
PKD1-225ENST00000562297 MAP3K2Q9Y2U5 619 aa20.68■□□□□ 0.9
PKD1-225ENST00000562297 HMMRO75330 724 aa20.67■□□□□ 0.9
PKD1-225ENST00000562297 ADAMTS2O95450 1211 aa20.67■□□□□ 0.9
PKD1-225ENST00000562297 LRRFIP2Q9Y608 721 aaKnown RBP20.67■□□□□ 0.9
PKD1-225ENST00000562297 UBTFL1P0CB47 393 aaPredicted RBP20.66■□□□□ 0.9
PKD1-225ENST00000562297 NPM2Q86SE8 214 aaKnown RBP20.66■□□□□ 0.9
PKD1-225ENST00000562297 LRP6O75581 1613 aa20.66■□□□□ 0.9
PKD1-225ENST00000562297 SEC24BO95487 1268 aa20.66■□□□□ 0.9
PKD1-225ENST00000562297 PNMA6EA0A0J9YXQ4 647 aa20.65■□□□□ 0.9
PKD1-225ENST00000562297 NBPF7P0C2Y1 421 aaPredicted RBP20.65■□□□□ 0.9
PKD1-225ENST00000562297 ATP8B2P98198 1209 aa20.65■□□□□ 0.9
PKD1-225ENST00000562297 SLIT2O94813 1529 aa20.64■□□□□ 0.89
PKD1-225ENST00000562297 UBAP1LF5GYI3 381 aa20.64■□□□□ 0.89
PKD1-225ENST00000562297 ALDH1L1O75891 902 aa20.63■□□□□ 0.89
PKD1-225ENST00000562297 MYL6BP14649 208 aa20.63■□□□□ 0.89
PKD1-225ENST00000562297 ERICH6Q7L0X2 663 aa20.63■□□□□ 0.89
PKD1-225ENST00000562297 IPO9Q96P70 1041 aaKnown RBP20.63■□□□□ 0.89
PKD1-225ENST00000562297 ARFGEF2Q9Y6D5 1785 aa20.63■□□□□ 0.89
PKD1-225ENST00000562297 SPATA31A1Q5TZJ5 1347 aa20.63■□□□□ 0.89
PKD1-225ENST00000562297 KAT6BQ8WYB5 2073 aa20.63■□□□□ 0.89
PKD1-225ENST00000562297 DDX58O95786 925 aaKnown RBP20.63■□□□□ 0.89
PKD1-225ENST00000562297 IBTKQ9P2D0 1353 aaPredicted RBP20.62■□□□□ 0.89
PKD1-225ENST00000562297 AIMP1Q12904 312 aaKnown RBP20.62■□□□□ 0.89
PKD1-225ENST00000562297 BMP2KLQ5H9B9 411 aa20.62■□□□□ 0.89
PKD1-225ENST00000562297 XAGE3Q8WTP9 111 aa20.62■□□□□ 0.89
PKD1-225ENST00000562297 COPS6Q7L5N1 327 aa20.61■□□□□ 0.89
PKD1-225ENST00000562297 LINS1Q8NG48 757 aa20.61■□□□□ 0.89
PKD1-225ENST00000562297 NUTM2BA6NNL0 878 aaPredicted RBP20.61■□□□□ 0.89
PKD1-225ENST00000562297 NUTM2EB1AL46 878 aaPredicted RBP20.61■□□□□ 0.89
PKD1-225ENST00000562297 PIP4K2AP48426 406 aaPredicted RBP20.61■□□□□ 0.89
PKD1-225ENST00000562297 NUTM2AQ8IVF1 878 aaPredicted RBP20.61■□□□□ 0.89
PKD1-225ENST00000562297 PLEKHM2Q8IWE5 1019 aa20.61■□□□□ 0.89
PKD1-225ENST00000562297 SSH3Q8TE77 659 aa20.61■□□□□ 0.89
PKD1-225ENST00000562297 TMOD3Q9NYL9 352 aa20.61■□□□□ 0.89
PKD1-225ENST00000562297 ERBB4Q15303 1308 aa20.61■□□□□ 0.89
PKD1-225ENST00000562297 CWF19L2Q2TBE0 894 aaKnown RBP20.6■□□□□ 0.89
PKD1-225ENST00000562297 NBPF26B4DH59 902 aa20.6■□□□□ 0.89
PKD1-225ENST00000562297 NBPF14Q5TI25 921 aa20.6■□□□□ 0.89
PKD1-225ENST00000562297 NBPF10Q6P3W6 841 aaKnown RBP20.6■□□□□ 0.89
PKD1-225ENST00000562297 C16orf71Q8IYS4 520 aaPredicted RBP20.6■□□□□ 0.89
PKD1-225ENST00000562297 NBPF15Q8N660 670 aa20.6■□□□□ 0.89
PKD1-225ENST00000562297 PIGBQ92521 554 aa20.6■□□□□ 0.89
PKD1-225ENST00000562297 THRAP3Q9Y2W1 955 aaKnown RBP20.6■□□□□ 0.89
PKD1-225ENST00000562297 IGKV5-2P06315 115 aa20.59■□□□□ 0.89
PKD1-225ENST00000562297 UTYO14607 1347 aa20.59■□□□□ 0.89
PKD1-225ENST00000562297 AFDNP55196 1824 aaKnown RBP20.59■□□□□ 0.89
PKD1-225ENST00000562297 NUP188Q5SRE5 1749 aa20.58■□□□□ 0.89
PKD1-225ENST00000562297 DOT1LQ8TEK3 1739 aa20.58■□□□□ 0.89
PKD1-225ENST00000562297 EXOC5O00471 708 aa20.58■□□□□ 0.89
PKD1-225ENST00000562297 SMARCA5O60264 1052 aaPredicted RBP20.58■□□□□ 0.89
PKD1-225ENST00000562297 PTCD1O75127 700 aaKnown RBP20.58■□□□□ 0.89
PKD1-225ENST00000562297 POLA2Q14181 598 aa20.58■□□□□ 0.89
PKD1-225ENST00000562297 CDCA7Q9BWT1 371 aaPredicted RBP20.58■□□□□ 0.89
PKD1-225ENST00000562297 EXOC6BQ9Y2D4 811 aa20.58■□□□□ 0.89
PKD1-225ENST00000562297 SPATA31A5Q5VU36 1347 aa20.58■□□□□ 0.89
PKD1-225ENST00000562297 SPATA31A7Q8IWB4 1347 aa20.58■□□□□ 0.89
PKD1-225ENST00000562297 BCL9O00512 1426 aa20.58■□□□□ 0.88
PKD1-225ENST00000562297 RIC3Q7Z5B4 369 aa20.58■□□□□ 0.88
PKD1-225ENST00000562297 OTUD7AQ8TE49 926 aaPredicted RBP20.58■□□□□ 0.88
PKD1-225ENST00000562297 ANKRD13DQ6ZTN6 518 aa20.57■□□□□ 0.88
PKD1-225ENST00000562297 PPP1R42Q7Z4L9 355 aa20.57■□□□□ 0.88
PKD1-225ENST00000562297 METTL22Q9BUU2 404 aaPredicted RBP20.57■□□□□ 0.88
PKD1-225ENST00000562297 APBB1O00213 710 aa20.56■□□□□ 0.88
PKD1-225ENST00000562297 ASAP1Q9ULH1 1129 aa20.56■□□□□ 0.88
PKD1-225ENST00000562297 MTX1Q13505 466 aa20.56■□□□□ 0.88
PKD1-225ENST00000562297 C9orf78Q9NZ63 289 aaPredicted RBP20.56■□□□□ 0.88
PKD1-225ENST00000562297 NEURL1BA8MQ27 555 aa20.55■□□□□ 0.88
PKD1-225ENST00000562297 GRM8O00222 908 aa20.55■□□□□ 0.88
PKD1-225ENST00000562297 TUBGCP6Q96RT7 1819 aa20.55■□□□□ 0.88
PKD1-225ENST00000562297 ATG3Q9NT62 314 aa20.55■□□□□ 0.88
PKD1-225ENST00000562297 JCADQ9P266 1359 aa20.55■□□□□ 0.88
PKD1-225ENST00000562297 GSPT1P15170 499 aaKnown RBP20.54■□□□□ 0.88
PKD1-225ENST00000562297 ZBTB47Q9UFB7 747 aaPredicted RBP20.54■□□□□ 0.88
PKD1-225ENST00000562297 KAZALD1Q96I82 304 aa20.54■□□□□ 0.88
PKD1-225ENST00000562297 NOP58Q9Y2X3 529 aaKnown RBP20.54■□□□□ 0.88
PKD1-225ENST00000562297 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.54■□□□□ 0.88
PKD1-225ENST00000562297 SRGAP3O43295 1099 aa20.53■□□□□ 0.88
PKD1-225ENST00000562297 A1BGP04217 495 aa20.53■□□□□ 0.88
PKD1-225ENST00000562297 VSIG10Q8N0Z9 540 aa20.53■□□□□ 0.88
PKD1-225ENST00000562297 SALL3Q9BXA9 1300 aa20.53■□□□□ 0.88
PKD1-225ENST00000562297 NEXNQ0ZGT2 675 aa20.53■□□□□ 0.88
PKD1-225ENST00000562297 TTC22Q5TAA0 569 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms