RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 SLC39A6Q13433 755 aa19.68■□□□□ 0.74
SPG7-205ENST00000561945 NARFQ9UHQ1 456 aa19.68■□□□□ 0.74
SPG7-205ENST00000561945 COL15A1P39059 1388 aa19.68■□□□□ 0.74
SPG7-205ENST00000561945 SBF1O95248 1867 aa19.67■□□□□ 0.74
SPG7-205ENST00000561945 ZPR1O75312 459 aa19.66■□□□□ 0.74
SPG7-205ENST00000561945 USPL1Q5W0Q7 1092 aa19.66■□□□□ 0.74
SPG7-205ENST00000561945 ARHGAP27Q6ZUM4 889 aa19.66■□□□□ 0.74
SPG7-205ENST00000561945 BCL2L12Q9HB09 334 aa19.66■□□□□ 0.74
SPG7-205ENST00000561945 ZBTB1Q9Y2K1 713 aa19.65■□□□□ 0.74
SPG7-205ENST00000561945 DALRD3Q5D0E6 543 aaKnown RBP19.64■□□□□ 0.73
SPG7-205ENST00000561945 IL17REQ8NFR9 667 aa19.64■□□□□ 0.73
SPG7-205ENST00000561945 CEMIPQ8WUJ3 1361 aa19.64■□□□□ 0.73
SPG7-205ENST00000561945 SCN7AQ01118 1682 aa19.64■□□□□ 0.73
SPG7-205ENST00000561945 NFIXQ14938 502 aa19.63■□□□□ 0.73
SPG7-205ENST00000561945 GAS2L2Q8NHY3 880 aa19.63■□□□□ 0.73
SPG7-205ENST00000561945 GNAT3A8MTJ3 354 aa19.62■□□□□ 0.73
SPG7-205ENST00000561945 EIF5P55010 431 aaKnown RBP19.62■□□□□ 0.73
SPG7-205ENST00000561945 HEG1Q9ULI3 1381 aa19.61■□□□□ 0.73
SPG7-205ENST00000561945 TOMM70O94826 608 aa19.61■□□□□ 0.73
SPG7-205ENST00000561945 CHRNA5P30532 468 aa19.61■□□□□ 0.73
SPG7-205ENST00000561945 ZNF790Q6PG37 636 aa19.61■□□□□ 0.73
SPG7-205ENST00000561945 STARD3NLO95772 234 aa19.6■□□□□ 0.73
SPG7-205ENST00000561945 C9orf131Q5VYM1 1079 aa19.6■□□□□ 0.73
SPG7-205ENST00000561945 TEX13AQ9BXU3 409 aaPredicted RBP19.6■□□□□ 0.73
SPG7-205ENST00000561945 TNRC6CQ9HCJ0 1690 aaKnown RBP19.59■□□□□ 0.73
SPG7-205ENST00000561945 ANKRD31Q8N7Z5 1873 aa19.59■□□□□ 0.73
SPG7-205ENST00000561945 TTC5Q8N0Z6 440 aa19.59■□□□□ 0.73
SPG7-205ENST00000561945 ZNF496Q96IT1 587 aaPredicted RBP19.59■□□□□ 0.73
SPG7-205ENST00000561945 SERPINB2P05120 415 aa19.58■□□□□ 0.72
SPG7-205ENST00000561945 BCORQ6W2J9 1755 aa19.57■□□□□ 0.72
SPG7-205ENST00000561945 ZC3H4Q9UPT8 1303 aaKnown RBP19.57■□□□□ 0.72
SPG7-205ENST00000561945 A0A087WZG4 1122 aa19.57■□□□□ 0.72
SPG7-205ENST00000561945 U2SURPO15042 1029 aaKnown RBP19.57■□□□□ 0.72
SPG7-205ENST00000561945 TEFQ10587 303 aa19.57■□□□□ 0.72
SPG7-205ENST00000561945 RSPH6AQ9H0K4 717 aa19.57■□□□□ 0.72
SPG7-205ENST00000561945 NMRK2Q9NPI5 230 aa19.57■□□□□ 0.72
SPG7-205ENST00000561945 CANXP27824 592 aaKnown RBP19.56■□□□□ 0.72
SPG7-205ENST00000561945 IL6STP40189 918 aaPredicted RBP19.56■□□□□ 0.72
SPG7-205ENST00000561945 PHACTR3Q96KR7 559 aa19.56■□□□□ 0.72
SPG7-205ENST00000561945 CARMIL3Q8ND23 1372 aa19.56■□□□□ 0.72
SPG7-205ENST00000561945 RBM46Q8TBY0 533 aaKnown RBP19.55■□□□□ 0.72
SPG7-205ENST00000561945 COL11A2P13942 1736 aaPredicted RBP19.54■□□□□ 0.72
SPG7-205ENST00000561945 PCNTO95613 3336 aa19.54■□□□□ 0.72
SPG7-205ENST00000561945 APLP1P51693 650 aa19.54■□□□□ 0.72
SPG7-205ENST00000561945 FMNL2Q96PY5 1086 aa19.54■□□□□ 0.72
SPG7-205ENST00000561945 WDR90Q96KV7 1748 aa19.54■□□□□ 0.72
SPG7-205ENST00000561945 KDM2BQ8NHM5 1336 aa19.53■□□□□ 0.72
SPG7-205ENST00000561945 PRKAR2BP31323 418 aa19.53■□□□□ 0.72
SPG7-205ENST00000561945 CFAP53Q96M91 514 aa19.53■□□□□ 0.72
SPG7-205ENST00000561945 RNF181Q9P0P0 153 aa19.53■□□□□ 0.72
SPG7-205ENST00000561945 PDZRN3Q9UPQ7 1066 aa19.53■□□□□ 0.72
SPG7-205ENST00000561945 TIAM2Q8IVF5 1701 aa19.52■□□□□ 0.72
SPG7-205ENST00000561945 ARFGEF2Q9Y6D5 1785 aa19.52■□□□□ 0.71
SPG7-205ENST00000561945 CCDC88AQ3V6T2 1871 aa19.52■□□□□ 0.71
SPG7-205ENST00000561945 PPP2R1AP30153 589 aa19.51■□□□□ 0.71
SPG7-205ENST00000561945 PRELPP51888 382 aa19.51■□□□□ 0.71
SPG7-205ENST00000561945 TBC1D9BQ66K14 1250 aa19.51■□□□□ 0.71
SPG7-205ENST00000561945 DNAJC5GQ8N7S2 189 aa19.51■□□□□ 0.71
SPG7-205ENST00000561945 TTLL6Q8N841 843 aa19.51■□□□□ 0.71
SPG7-205ENST00000561945 FER1L6Q2WGJ9 1857 aa19.51■□□□□ 0.71
SPG7-205ENST00000561945 H0YIN7 160 aa19.5■□□□□ 0.71
SPG7-205ENST00000561945 FSTL1Q12841 308 aa19.5■□□□□ 0.71
SPG7-205ENST00000561945 C2CD5Q86YS7 1000 aa19.5■□□□□ 0.71
SPG7-205ENST00000561945 BRIP1Q9BX63 1249 aa19.5■□□□□ 0.71
SPG7-205ENST00000561945 DICER1Q9UPY3 1922 aaKnown RBP19.5■□□□□ 0.71
SPG7-205ENST00000561945 BTBD11A6QL63 1104 aa19.49■□□□□ 0.71
SPG7-205ENST00000561945 CAMTA2O94983 1202 aa19.49■□□□□ 0.71
SPG7-205ENST00000561945 LMNB1P20700 586 aa19.49■□□□□ 0.71
SPG7-205ENST00000561945 IFFO2Q5TF58 517 aa19.49■□□□□ 0.71
SPG7-205ENST00000561945 PRR5LQ6MZQ0 368 aa19.49■□□□□ 0.71
SPG7-205ENST00000561945 NUDCQ9Y266 331 aa19.49■□□□□ 0.71
SPG7-205ENST00000561945 RGL2O15211 777 aa19.48■□□□□ 0.71
SPG7-205ENST00000561945 KCNQ3O43525 872 aa19.48■□□□□ 0.71
SPG7-205ENST00000561945 HTATSF1O43719 755 aaKnown RBP19.48■□□□□ 0.71
SPG7-205ENST00000561945 A1BGP04217 495 aa19.48■□□□□ 0.71
SPG7-205ENST00000561945 NFKBIEO00221 500 aa19.47■□□□□ 0.71
SPG7-205ENST00000561945 PDE6BP35913 854 aa19.47■□□□□ 0.71
SPG7-205ENST00000561945 RASSF7Q02833 373 aa19.47■□□□□ 0.71
SPG7-205ENST00000561945 TBC1D2BQ9UPU7 963 aa19.47■□□□□ 0.71
SPG7-205ENST00000561945 BICDL1Q6ZP65 573 aa19.46■□□□□ 0.71
SPG7-205ENST00000561945 USP16Q9Y5T5 823 aa19.46■□□□□ 0.71
SPG7-205ENST00000561945 LAMB4A4D0S4 1761 aa19.46■□□□□ 0.71
SPG7-205ENST00000561945 GLTPD2A6NH11 291 aa19.45■□□□□ 0.7
SPG7-205ENST00000561945 CNGB1Q14028 1251 aaPredicted RBP19.45■□□□□ 0.7
SPG7-205ENST00000561945 CLEC4GQ6UXB4 293 aa19.45■□□□□ 0.7
SPG7-205ENST00000561945 RRAGCQ9HB90 399 aa19.45■□□□□ 0.7
SPG7-205ENST00000561945 DLG5Q8TDM6 1919 aa19.45■□□□□ 0.7
SPG7-205ENST00000561945 KDM3BQ7LBC6 1761 aa19.44■□□□□ 0.7
SPG7-205ENST00000561945 SNRPA1P09661 255 aaKnown RBP19.44■□□□□ 0.7
SPG7-205ENST00000561945 U2AF1L5P0DN76 240 aaPredicted RBP19.44■□□□□ 0.7
SPG7-205ENST00000561945 HTRA3P83110 453 aa19.44■□□□□ 0.7
SPG7-205ENST00000561945 U2AF1Q01081 240 aaKnown RBP eCLIP19.44■□□□□ 0.77e-6■□□□□ 8.1
SPG7-205ENST00000561945 C16orf71Q8IYS4 520 aaPredicted RBP19.44■□□□□ 0.7
SPG7-205ENST00000561945 SETDB2Q96T68 719 aa19.44■□□□□ 0.7
SPG7-205ENST00000561945 LTBP3Q9NS15 1303 aa19.44■□□□□ 0.7
SPG7-205ENST00000561945 DZIP3Q86Y13 1208 aaKnown RBP19.43■□□□□ 0.7
SPG7-205ENST00000561945 SLX4Q8IY92 1834 aa19.43■□□□□ 0.7
SPG7-205ENST00000561945 PRAMEF22A3QJZ6 481 aa19.42■□□□□ 0.7
SPG7-205ENST00000561945 STYK1Q6J9G0 422 aa19.42■□□□□ 0.7
SPG7-205ENST00000561945 MCM10Q7L590 875 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms