RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 CGNL1Q0VF96 1302 aa13.87□□□□□ -0.19
AC010542.3-202ENST00000561728 PCDH11XQ9BZA7 1347 aa13.87□□□□□ -0.19
AC010542.3-202ENST00000561728 PCDH11YQ9BZA8 1340 aa13.87□□□□□ -0.19
AC010542.3-202ENST00000561728 MKI67P46013 3256 aaKnown RBP13.86□□□□□ -0.19
AC010542.3-202ENST00000561728 TAOK3Q9H2K8 898 aa13.85□□□□□ -0.19
AC010542.3-202ENST00000561728 SMG6Q86US8 1419 aaKnown RBP13.84□□□□□ -0.19
AC010542.3-202ENST00000561728 FMR1Q06787 632 aaKnown RBP eCLIP13.84□□□□□ -0.19
AC010542.3-202ENST00000561728 RAPGEF4Q8WZA2 1011 aa13.84□□□□□ -0.19
AC010542.3-202ENST00000561728 IP6K1Q92551 441 aa13.84□□□□□ -0.19
AC010542.3-202ENST00000561728 ITGB4P16144 1822 aa13.84□□□□□ -0.19
AC010542.3-202ENST00000561728 FKBP8Q14318 412 aa13.83□□□□□ -0.2
AC010542.3-202ENST00000561728 POLRMTO00411 1230 aaKnown RBP13.82□□□□□ -0.2
AC010542.3-202ENST00000561728 C21orf2O43822 256 aa13.82□□□□□ -0.2
AC010542.3-202ENST00000561728 AKAP4Q5JQC9 854 aa13.82□□□□□ -0.2
AC010542.3-202ENST00000561728 CST9Q5W186 159 aa13.82□□□□□ -0.2
AC010542.3-202ENST00000561728 C2CD5Q86YS7 1000 aa13.82□□□□□ -0.2
AC010542.3-202ENST00000561728 SAGE1Q9NXZ1 904 aa13.82□□□□□ -0.2
AC010542.3-202ENST00000561728 LTBP3Q9NS15 1303 aa13.82□□□□□ -0.2
AC010542.3-202ENST00000561728 USP31Q70CQ4 1352 aa13.82□□□□□ -0.2
AC010542.3-202ENST00000561728 DLEC1Q9Y238 1755 aa13.81□□□□□ -0.2
AC010542.3-202ENST00000561728 TRPM7Q96QT4 1865 aa13.81□□□□□ -0.2
AC010542.3-202ENST00000561728 H0YIN7 160 aa13.81□□□□□ -0.2
AC010542.3-202ENST00000561728 RPS6KA4O75676 772 aa13.81□□□□□ -0.2
AC010542.3-202ENST00000561728 TATP17735 454 aaPredicted RBP13.81□□□□□ -0.2
AC010542.3-202ENST00000561728 NOGQ13253 232 aa13.81□□□□□ -0.2
AC010542.3-202ENST00000561728 PKN2Q16513 984 aaKnown RBP13.81□□□□□ -0.2
AC010542.3-202ENST00000561728 SAPCD2Q86UD0 394 aa13.81□□□□□ -0.2
AC010542.3-202ENST00000561728 MPHOSPH9Q99550 1183 aa13.81□□□□□ -0.2
AC010542.3-202ENST00000561728 RNF123Q5XPI4 1314 aa13.81□□□□□ -0.2
AC010542.3-202ENST00000561728 CD163L1Q9NR16 1453 aa13.8□□□□□ -0.2
AC010542.3-202ENST00000561728 RC3H1Q5TC82 1133 aaKnown RBP13.8□□□□□ -0.2
AC010542.3-202ENST00000561728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.8□□□□□ -0.2
AC010542.3-202ENST00000561728 DCAF11Q8TEB1 546 aa13.8□□□□□ -0.2
AC010542.3-202ENST00000561728 HHIPL1Q96JK4 782 aa13.8□□□□□ -0.2
AC010542.3-202ENST00000561728 SRP68Q9UHB9 627 aaKnown RBP13.8□□□□□ -0.2
AC010542.3-202ENST00000561728 KTN1Q86UP2 1357 aaKnown RBP13.8□□□□□ -0.2
AC010542.3-202ENST00000561728 FER1L6Q2WGJ9 1857 aa13.79□□□□□ -0.2
AC010542.3-202ENST00000561728 TMOD3Q9NYL9 352 aa13.79□□□□□ -0.2
AC010542.3-202ENST00000561728 ASAP1Q9ULH1 1129 aa13.79□□□□□ -0.2
AC010542.3-202ENST00000561728 TRAF5O00463 557 aa13.78□□□□□ -0.2
AC010542.3-202ENST00000561728 BICDL1Q6ZP65 573 aa13.78□□□□□ -0.2
AC010542.3-202ENST00000561728 CNTNAP4Q9C0A0 1308 aa13.78□□□□□ -0.2
AC010542.3-202ENST00000561728 USP42Q9H9J4 1324 aaKnown RBP13.78□□□□□ -0.2
AC010542.3-202ENST00000561728 CENPJQ9HC77 1338 aaPredicted RBP13.78□□□□□ -0.2
AC010542.3-202ENST00000561728 ZNF622Q969S3 477 aaKnown RBP eCLIP13.77□□□□□ -0.21
AC010542.3-202ENST00000561728 ZNF541Q9H0D2 1346 aa13.77□□□□□ -0.21
AC010542.3-202ENST00000561728 CYP27B1O15528 508 aa13.76□□□□□ -0.21
AC010542.3-202ENST00000561728 CELF2O95319 508 aaKnown RBP13.76□□□□□ -0.21
AC010542.3-202ENST00000561728 NME9Q86XW9 330 aa13.76□□□□□ -0.21
AC010542.3-202ENST00000561728 ZIC5Q96T25 663 aa13.76□□□□□ -0.21
AC010542.3-202ENST00000561728 COL25A1Q9BXS0 654 aaPredicted RBP13.76□□□□□ -0.21
AC010542.3-202ENST00000561728 RGPD2P0DJD1 1756 aa13.76□□□□□ -0.21
AC010542.3-202ENST00000561728 CEP290O15078 2479 aa13.75□□□□□ -0.21
AC010542.3-202ENST00000561728 MAP3K19Q56UN5 1328 aa13.75□□□□□ -0.21
AC010542.3-202ENST00000561728 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
AC010542.3-202ENST00000561728 TRPA1O75762 1119 aa13.75□□□□□ -0.21
AC010542.3-202ENST00000561728 TM4SF1P30408 202 aa13.75□□□□□ -0.21
AC010542.3-202ENST00000561728 USHBP1Q8N6Y0 703 aa13.75□□□□□ -0.21
AC010542.3-202ENST00000561728 INSRP06213 1382 aa13.74□□□□□ -0.21
AC010542.3-202ENST00000561728 STAC3Q96MF2 364 aa13.74□□□□□ -0.21
AC010542.3-202ENST00000561728 HDAC9Q9UKV0 1011 aa13.74□□□□□ -0.21
AC010542.3-202ENST00000561728 LMOD1P29536 600 aaPredicted RBP13.73□□□□□ -0.21
AC010542.3-202ENST00000561728 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
AC010542.3-202ENST00000561728 RNF186Q9NXI6 227 aa13.73□□□□□ -0.21
AC010542.3-202ENST00000561728 KDRP35968 1356 aa13.72□□□□□ -0.21
AC010542.3-202ENST00000561728 AMPHP49418 695 aa13.72□□□□□ -0.21
AC010542.3-202ENST00000561728 SOGA3Q5TF21 947 aa13.72□□□□□ -0.21
AC010542.3-202ENST00000561728 NBPF6Q5VWK0 638 aa13.72□□□□□ -0.21
AC010542.3-202ENST00000561728 NBPF4Q96M43 638 aa13.72□□□□□ -0.21
AC010542.3-202ENST00000561728 ATG3Q9NT62 314 aa13.72□□□□□ -0.21
AC010542.3-202ENST00000561728 EVC2Q86UK5 1308 aa13.71□□□□□ -0.21
AC010542.3-202ENST00000561728 ZPR1O75312 459 aa13.71□□□□□ -0.21
AC010542.3-202ENST00000561728 HOXC9P31274 260 aa13.71□□□□□ -0.21
AC010542.3-202ENST00000561728 PRDM6Q9NQX0 595 aa13.71□□□□□ -0.21
AC010542.3-202ENST00000561728 AFDNP55196 1824 aaKnown RBP13.7□□□□□ -0.22
AC010542.3-202ENST00000561728 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
AC010542.3-202ENST00000561728 ZNF408Q9H9D4 720 aa13.7□□□□□ -0.22
AC010542.3-202ENST00000561728 SERPINB2P05120 415 aa13.69□□□□□ -0.22
AC010542.3-202ENST00000561728 FBXO46Q6PJ61 603 aaPredicted RBP13.69□□□□□ -0.22
AC010542.3-202ENST00000561728 GPC2Q8N158 579 aa13.69□□□□□ -0.22
AC010542.3-202ENST00000561728 SYNE4Q8N205 404 aa13.69□□□□□ -0.22
AC010542.3-202ENST00000561728 OTUD5Q96G74 571 aa13.69□□□□□ -0.22
AC010542.3-202ENST00000561728 PDZRN3Q9UPQ7 1066 aa13.69□□□□□ -0.22
AC010542.3-202ENST00000561728 UNC80Q8N2C7 3258 aa13.68□□□□□ -0.22
AC010542.3-202ENST00000561728 COL5A3P25940 1745 aaPredicted RBP13.68□□□□□ -0.22
AC010542.3-202ENST00000561728 NFIXQ14938 502 aa13.68□□□□□ -0.22
AC010542.3-202ENST00000561728 NKX1-1Q15270 411 aaPredicted RBP13.68□□□□□ -0.22
AC010542.3-202ENST00000561728 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
AC010542.3-202ENST00000561728 SLC4A9Q96Q91 983 aa13.68□□□□□ -0.22
AC010542.3-202ENST00000561728 AKAP11Q9UKA4 1901 aa13.68□□□□□ -0.22
AC010542.3-202ENST00000561728 MON2Q7Z3U7 1717 aa13.67□□□□□ -0.22
AC010542.3-202ENST00000561728 MYH14Q7Z406 1995 aaKnown RBP13.67□□□□□ -0.22
AC010542.3-202ENST00000561728 POTEFA5A3E0 1075 aa13.67□□□□□ -0.22
AC010542.3-202ENST00000561728 USPL1Q5W0Q7 1092 aa13.67□□□□□ -0.22
AC010542.3-202ENST00000561728 CARMIL3Q8ND23 1372 aa13.67□□□□□ -0.22
AC010542.3-202ENST00000561728 NRXN2Q9P2S2 1712 aa13.67□□□□□ -0.22
AC010542.3-202ENST00000561728 CRKLP46109 303 aaKnown RBP13.66□□□□□ -0.22
AC010542.3-202ENST00000561728 HUNKP57058 714 aa13.66□□□□□ -0.22
AC010542.3-202ENST00000561728 KIF23Q02241 960 aaPredicted RBP13.66□□□□□ -0.22
AC010542.3-202ENST00000561728 USP50Q70EL3 339 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms