RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 DDRGK1Q96HY6 314 aa12.78□□□□□ -0.36
TUBGCP4-202ENST00000561691 USP44Q9H0E7 712 aa12.78□□□□□ -0.36
TUBGCP4-202ENST00000561691 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
TUBGCP4-202ENST00000561691 BEND3Q5T5X7 828 aa12.76□□□□□ -0.37
TUBGCP4-202ENST00000561691 ANKRD45Q5TZF3 282 aa12.76□□□□□ -0.37
TUBGCP4-202ENST00000561691 LRP10Q7Z4F1 713 aa12.76□□□□□ -0.37
TUBGCP4-202ENST00000561691 TOM1L2Q6ZVM7 507 aa12.76□□□□□ -0.37
TUBGCP4-202ENST00000561691 DISP2A7MBM2 1401 aa12.75□□□□□ -0.37
TUBGCP4-202ENST00000561691 ZNF496Q96IT1 587 aaPredicted RBP12.75□□□□□ -0.37
TUBGCP4-202ENST00000561691 DBF4Q9UBU7 674 aaPredicted RBP12.75□□□□□ -0.37
TUBGCP4-202ENST00000561691 PAPPAQ13219 1627 aa12.75□□□□□ -0.37
TUBGCP4-202ENST00000561691 PI4KAP2A4QPH2 592 aa12.74□□□□□ -0.37
TUBGCP4-202ENST00000561691 GNAI2P04899 355 aa12.74□□□□□ -0.37
TUBGCP4-202ENST00000561691 PI4KAP1Q8N8J0 262 aa12.74□□□□□ -0.37
TUBGCP4-202ENST00000561691 ZCRB1Q8TBF4 217 aaKnown RBP12.74□□□□□ -0.37
TUBGCP4-202ENST00000561691 DNAAF4Q8WXU2 420 aa12.74□□□□□ -0.37
TUBGCP4-202ENST00000561691 COL14A1Q05707 1796 aaKnown RBP12.74□□□□□ -0.37
TUBGCP4-202ENST00000561691 PCDH11XQ9BZA7 1347 aa12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 PCDH11YQ9BZA8 1340 aa12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 TOGARAM1Q9Y4F4 1720 aa12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 KCPQ6ZWJ8 1503 aa12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 PNMA6EA0A0J9YXQ4 647 aa12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 RRP9O43818 475 aaKnown RBP12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 HSP90AB1P08238 724 aaKnown RBP12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 GNAI3P08754 354 aa12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 IL2RBP14784 551 aa12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 PLEKHM2Q8IWE5 1019 aa12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 CHMP4AQ9BY43 222 aa12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 DDX21Q9NR30 783 aaKnown RBP eCLIP12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 UBR2Q8IWV8 1755 aa12.73□□□□□ -0.37
TUBGCP4-202ENST00000561691 ATP8B2P98198 1209 aa12.72□□□□□ -0.37
TUBGCP4-202ENST00000561691 BMP2KLQ5H9B9 411 aa12.72□□□□□ -0.37
TUBGCP4-202ENST00000561691 TNS2Q63HR2 1409 aa12.72□□□□□ -0.37
TUBGCP4-202ENST00000561691 C16orf71Q8IYS4 520 aaPredicted RBP12.72□□□□□ -0.37
TUBGCP4-202ENST00000561691 OTUD7AQ8TE49 926 aaPredicted RBP12.72□□□□□ -0.37
TUBGCP4-202ENST00000561691 RRAGDQ9NQL2 400 aaPredicted RBP12.72□□□□□ -0.37
TUBGCP4-202ENST00000561691 SRCIN1Q9C0H9 1055 aa12.72□□□□□ -0.37
TUBGCP4-202ENST00000561691 STRN4Q9NRL3 753 aa12.72□□□□□ -0.37
TUBGCP4-202ENST00000561691 USP16Q9Y5T5 823 aa12.72□□□□□ -0.37
TUBGCP4-202ENST00000561691 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
TUBGCP4-202ENST00000561691 IBTKQ9P2D0 1353 aaPredicted RBP12.71□□□□□ -0.37
TUBGCP4-202ENST00000561691 GSPT1P15170 499 aaKnown RBP12.71□□□□□ -0.37
TUBGCP4-202ENST00000561691 KSR2Q6VAB6 950 aa12.71□□□□□ -0.37
TUBGCP4-202ENST00000561691 HYPKQ9NX55 129 aa12.71□□□□□ -0.37
TUBGCP4-202ENST00000561691 BTG4Q9NY30 223 aa12.71□□□□□ -0.37
TUBGCP4-202ENST00000561691 SALL3Q9BXA9 1300 aa12.71□□□□□ -0.38
TUBGCP4-202ENST00000561691 ERVV-2B6SEH9 535 aa12.7□□□□□ -0.38
TUBGCP4-202ENST00000561691 SMARCA5O60264 1052 aaPredicted RBP12.7□□□□□ -0.38
TUBGCP4-202ENST00000561691 NBPF7P0C2Y1 421 aaPredicted RBP12.7□□□□□ -0.38
TUBGCP4-202ENST00000561691 POLA2Q14181 598 aa12.7□□□□□ -0.38
TUBGCP4-202ENST00000561691 TBC1D32Q96NH3 1257 aa12.7□□□□□ -0.38
TUBGCP4-202ENST00000561691 CABP4P57796 275 aa12.7□□□□□ -0.38
TUBGCP4-202ENST00000561691 SSH3Q8TE77 659 aa12.7□□□□□ -0.38
TUBGCP4-202ENST00000561691 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
TUBGCP4-202ENST00000561691 PLCH1Q4KWH8 1693 aa12.69□□□□□ -0.38
TUBGCP4-202ENST00000561691 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
TUBGCP4-202ENST00000561691 SNRPA1P09661 255 aaKnown RBP12.69□□□□□ -0.38
TUBGCP4-202ENST00000561691 ALDH1L1O75891 902 aa12.68□□□□□ -0.38
TUBGCP4-202ENST00000561691 UBTFL1P0CB47 393 aaPredicted RBP12.68□□□□□ -0.38
TUBGCP4-202ENST00000561691 FMNL2Q96PY5 1086 aa12.68□□□□□ -0.38
TUBGCP4-202ENST00000561691 UTYO14607 1347 aa12.68□□□□□ -0.38
TUBGCP4-202ENST00000561691 HMMRO75330 724 aa12.68□□□□□ -0.38
TUBGCP4-202ENST00000561691 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
TUBGCP4-202ENST00000561691 IGKV5-2P06315 115 aa12.68□□□□□ -0.38
TUBGCP4-202ENST00000561691 EVA1CP58658 441 aa12.68□□□□□ -0.38
TUBGCP4-202ENST00000561691 HSP90AA2PQ14568 343 aaPredicted RBP12.68□□□□□ -0.38
TUBGCP4-202ENST00000561691 KAZALD1Q96I82 304 aa12.68□□□□□ -0.38
TUBGCP4-202ENST00000561691 NRAPQ86VF7 1730 aa12.67□□□□□ -0.38
TUBGCP4-202ENST00000561691 MTX1Q13505 466 aa12.67□□□□□ -0.38
TUBGCP4-202ENST00000561691 EXOC6BQ9Y2D4 811 aa12.67□□□□□ -0.38
TUBGCP4-202ENST00000561691 PHLPP1O60346 1717 aa12.67□□□□□ -0.38
TUBGCP4-202ENST00000561691 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 CWF19L2Q2TBE0 894 aaKnown RBP12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 TTC22Q5TAA0 569 aa12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 NBPF14Q5TI25 921 aa12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 NBPF15Q8N660 670 aa12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 XAGE3Q8WTP9 111 aa12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 OSBPL3Q9H4L5 887 aa12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 WNK3Q9BYP7 1800 aa12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 PPP1R42Q7Z4L9 355 aa12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 TTC5Q8N0Z6 440 aa12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 LINS1Q8NG48 757 aa12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 DDX54Q8TDD1 881 aaKnown RBP12.66□□□□□ -0.38
TUBGCP4-202ENST00000561691 TUBGCP6Q96RT7 1819 aa12.65□□□□□ -0.38
TUBGCP4-202ENST00000561691 PIP4K2AP48426 406 aaPredicted RBP12.65□□□□□ -0.38
TUBGCP4-202ENST00000561691 COPS6Q7L5N1 327 aa12.65□□□□□ -0.38
TUBGCP4-202ENST00000561691 TBC1D9Q6ZT07 1266 aa12.64□□□□□ -0.39
TUBGCP4-202ENST00000561691 LRP6O75581 1613 aa12.64□□□□□ -0.39
TUBGCP4-202ENST00000561691 APBB1O00213 710 aa12.64□□□□□ -0.39
TUBGCP4-202ENST00000561691 MYL6BP14649 208 aa12.64□□□□□ -0.39
TUBGCP4-202ENST00000561691 AIMP1Q12904 312 aaKnown RBP12.64□□□□□ -0.39
TUBGCP4-202ENST00000561691 ERBB4Q15303 1308 aa12.63□□□□□ -0.39
TUBGCP4-202ENST00000561691 FRAT2O75474 233 aaPredicted RBP12.63□□□□□ -0.39
TUBGCP4-202ENST00000561691 HSP90AA1P07900 732 aaKnown RBP12.63□□□□□ -0.39
TUBGCP4-202ENST00000561691 SLC4A3P48751 1232 aa12.63□□□□□ -0.39
TUBGCP4-202ENST00000561691 METTL22Q9BUU2 404 aaPredicted RBP12.63□□□□□ -0.39
TUBGCP4-202ENST00000561691 SLIT2O94813 1529 aa12.63□□□□□ -0.39
TUBGCP4-202ENST00000561691 NEURL1BA8MQ27 555 aa12.62□□□□□ -0.39
TUBGCP4-202ENST00000561691 PDE1AP54750 535 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms