RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 ATP1A2P50993 1020 aa10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 USP17L2Q6R6M4 530 aa10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 USP17L1Q7RTZ2 530 aa10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 PODNQ7Z5L7 613 aa10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 KLRG1Q96E93 195 aa10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 NDFIP2Q9NV92 336 aa10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 GDF2Q9UK05 429 aaPredicted RBP10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 PCDHGC4Q9Y5F7 938 aa10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 USP3Q9Y6I4 520 aa10.62□□□□□ -0.71
HMBOX1-216ENST00000561377 PHF20L1A8MW92 1017 aa10.61□□□□□ -0.71
HMBOX1-216ENST00000561377 ATP9BO43861 1147 aa10.61□□□□□ -0.71
HMBOX1-216ENST00000561377 BMP4P12644 408 aa10.61□□□□□ -0.71
HMBOX1-216ENST00000561377 ARSJQ5FYB0 599 aaPredicted RBP10.61□□□□□ -0.71
HMBOX1-216ENST00000561377 PROSER2Q86WR7 435 aaPredicted RBP10.61□□□□□ -0.71
HMBOX1-216ENST00000561377 UCN2Q96RP3 112 aa10.61□□□□□ -0.71
HMBOX1-216ENST00000561377 ZCCHC2Q9C0B9 1178 aaKnown RBP10.61□□□□□ -0.71
HMBOX1-216ENST00000561377 SCHIP1Q9P0W5 487 aaPredicted RBP10.61□□□□□ -0.71
HMBOX1-216ENST00000561377 KCTD17Q8N5Z5 321 aa10.6□□□□□ -0.71
HMBOX1-216ENST00000561377 CLUAP1Q96AJ1 413 aa10.6□□□□□ -0.71
HMBOX1-216ENST00000561377 DNAAF2Q9NVR5 837 aaKnown RBP10.6□□□□□ -0.71
HMBOX1-216ENST00000561377 A0A1W2PNR3 127 aa10.59□□□□□ -0.71
HMBOX1-216ENST00000561377 BEND7Q8N7W2 519 aaPredicted RBP10.59□□□□□ -0.71
HMBOX1-216ENST00000561377 GOLGA6L1Q8N7Z2 621 aa10.59□□□□□ -0.71
HMBOX1-216ENST00000561377 ATXN7O15265 892 aaPredicted RBP10.58□□□□□ -0.72
HMBOX1-216ENST00000561377 TPCN2Q8NHX9 752 aa10.58□□□□□ -0.72
HMBOX1-216ENST00000561377 GJA3Q9Y6H8 435 aa10.58□□□□□ -0.72
HMBOX1-216ENST00000561377 DNMT3AQ9Y6K1 912 aaPredicted RBP10.58□□□□□ -0.72
HMBOX1-216ENST00000561377 CTBSQ01459 385 aa10.57□□□□□ -0.72
HMBOX1-216ENST00000561377 CCDC102BQ68D86 513 aa10.57□□□□□ -0.72
HMBOX1-216ENST00000561377 FNBP4Q8N3X1 1017 aaPredicted RBP10.57□□□□□ -0.72
HMBOX1-216ENST00000561377 GALNT6Q8NCL4 622 aa10.57□□□□□ -0.72
HMBOX1-216ENST00000561377 ZIC5Q96T25 663 aa10.57□□□□□ -0.72
HMBOX1-216ENST00000561377 ZBTB7BO15156 539 aaPredicted RBP10.56□□□□□ -0.72
HMBOX1-216ENST00000561377 EPHA4P54764 986 aa10.56□□□□□ -0.72
HMBOX1-216ENST00000561377 FOXK2Q01167 660 aa10.56□□□□□ -0.72
HMBOX1-216ENST00000561377 TEAD4Q15561 434 aa10.56□□□□□ -0.72
HMBOX1-216ENST00000561377 BICDL1Q6ZP65 573 aa10.56□□□□□ -0.72
HMBOX1-216ENST00000561377 SLC9A9Q8IVB4 645 aa10.56□□□□□ -0.72
HMBOX1-216ENST00000561377 LARGE2Q8N3Y3 721 aa10.56□□□□□ -0.72
HMBOX1-216ENST00000561377 GLMNQ92990 594 aa10.56□□□□□ -0.72
HMBOX1-216ENST00000561377 MKRN1Q9UHC7 482 aaKnown RBP10.56□□□□□ -0.72
HMBOX1-216ENST00000561377 PARP3Q9Y6F1 533 aa10.56□□□□□ -0.72
HMBOX1-216ENST00000561377 CNTNAP5Q8WYK1 1306 aa10.56□□□□□ -0.72
HMBOX1-216ENST00000561377 C2CD2LO14523 706 aa10.55□□□□□ -0.72
HMBOX1-216ENST00000561377 NOS2P35228 1153 aa10.55□□□□□ -0.72
HMBOX1-216ENST00000561377 CLDN10P78369 228 aa10.55□□□□□ -0.72
HMBOX1-216ENST00000561377 TNS4Q8IZW8 715 aa10.55□□□□□ -0.72
HMBOX1-216ENST00000561377 OGFOD1Q8N543 542 aa10.55□□□□□ -0.72
HMBOX1-216ENST00000561377 EDARADDQ8WWZ3 215 aa10.55□□□□□ -0.72
HMBOX1-216ENST00000561377 L3MBTL2Q969R5 705 aa10.55□□□□□ -0.72
HMBOX1-216ENST00000561377 KIAA1024Q9UPX6 916 aa10.55□□□□□ -0.72
HMBOX1-216ENST00000561377 RBM19Q9Y4C8 960 aaKnown RBP10.55□□□□□ -0.72
HMBOX1-216ENST00000561377 DCDC2BA2VCK2 349 aa10.54□□□□□ -0.72
HMBOX1-216ENST00000561377 PALM3A6NDB9 673 aaPredicted RBP10.54□□□□□ -0.72
HMBOX1-216ENST00000561377 KHNYNO15037 678 aaKnown RBP10.54□□□□□ -0.72
HMBOX1-216ENST00000561377 MAPTP10636 758 aaKnown RBP10.54□□□□□ -0.72
HMBOX1-216ENST00000561377 TXLNAP40222 546 aa10.54□□□□□ -0.72
HMBOX1-216ENST00000561377 SLCO4C1Q6ZQN7 724 aa10.54□□□□□ -0.72
HMBOX1-216ENST00000561377 ZDHHC1Q8WTX9 485 aa10.54□□□□□ -0.72
HMBOX1-216ENST00000561377 ZNF232Q9UNY5 417 aa10.54□□□□□ -0.72
HMBOX1-216ENST00000561377 M0R2N6 131 aa10.53□□□□□ -0.72
HMBOX1-216ENST00000561377 FAM157BP0CG42 384 aa10.53□□□□□ -0.72
HMBOX1-216ENST00000561377 ARAFP10398 606 aa10.53□□□□□ -0.72
HMBOX1-216ENST00000561377 TNP2Q05952 138 aa10.53□□□□□ -0.72
HMBOX1-216ENST00000561377 FAM182BQ5T319 152 aa10.53□□□□□ -0.72
HMBOX1-216ENST00000561377 GGA1Q9UJY5 639 aa10.53□□□□□ -0.72
HMBOX1-216ENST00000561377 CHMP3Q9Y3E7 222 aa10.53□□□□□ -0.72
HMBOX1-216ENST00000561377 A6NJR5 290 aa10.52□□□□□ -0.73
HMBOX1-216ENST00000561377 SHISA8B8ZZ34 492 aa10.52□□□□□ -0.73
HMBOX1-216ENST00000561377 SAMD5Q5TGI4 173 aa10.52□□□□□ -0.73
HMBOX1-216ENST00000561377 C1orf229Q6ZS94 237 aaPredicted RBP10.52□□□□□ -0.73
HMBOX1-216ENST00000561377 SIX5Q8N196 739 aa10.52□□□□□ -0.73
HMBOX1-216ENST00000561377 GPC6Q9Y625 555 aaPredicted RBP10.52□□□□□ -0.73
HMBOX1-216ENST00000561377 SERTM1A2A2V5 107 aa10.51□□□□□ -0.73
HMBOX1-216ENST00000561377 PSMA6P60900 246 aaKnown RBP10.51□□□□□ -0.73
HMBOX1-216ENST00000561377 TBCELQ5QJ74 424 aa10.51□□□□□ -0.73
HMBOX1-216ENST00000561377 TFIP11Q9UBB9 837 aaKnown RBP10.51□□□□□ -0.73
HMBOX1-216ENST00000561377 MKL2Q9ULH7 1088 aa10.51□□□□□ -0.73
HMBOX1-216ENST00000561377 EML1O00423 815 aa10.5□□□□□ -0.73
HMBOX1-216ENST00000561377 CD33P20138 364 aa10.5□□□□□ -0.73
HMBOX1-216ENST00000561377 CALR3Q96L12 384 aaKnown RBP10.5□□□□□ -0.73
HMBOX1-216ENST00000561377 RRAGCQ9HB90 399 aa10.5□□□□□ -0.73
HMBOX1-216ENST00000561377 NEUROD4Q9HD90 331 aa10.5□□□□□ -0.73
HMBOX1-216ENST00000561377 AVENQ9NQS1 362 aaPredicted RBP10.5□□□□□ -0.73
HMBOX1-216ENST00000561377 IGHA1P01876 353 aa10.49□□□□□ -0.73
HMBOX1-216ENST00000561377 AMPD1P23109 780 aa10.49□□□□□ -0.73
HMBOX1-216ENST00000561377 LAMC2Q13753 1193 aa10.49□□□□□ -0.73
HMBOX1-216ENST00000561377 ZNF594Q96JF6 807 aaPredicted RBP10.49□□□□□ -0.73
HMBOX1-216ENST00000561377 MAFBQ9Y5Q3 323 aaPredicted RBP10.49□□□□□ -0.73
HMBOX1-216ENST00000561377 EPXP11678 715 aa10.48□□□□□ -0.73
HMBOX1-216ENST00000561377 RASA1P20936 1047 aa10.48□□□□□ -0.73
HMBOX1-216ENST00000561377 ADH6P28332 368 aa10.48□□□□□ -0.73
HMBOX1-216ENST00000561377 TSPAN10Q9H1Z9 355 aaPredicted RBP10.48□□□□□ -0.73
HMBOX1-216ENST00000561377 MARK1Q9P0L2 795 aa10.48□□□□□ -0.73
HMBOX1-216ENST00000561377 NEURL1BA8MQ27 555 aa10.47□□□□□ -0.73
HMBOX1-216ENST00000561377 SNRPNP63162 240 aaKnown RBP10.47□□□□□ -0.73
HMBOX1-216ENST00000561377 GPAT2Q6NUI2 795 aa10.47□□□□□ -0.73
HMBOX1-216ENST00000561377 RHPN1Q8TCX5 695 aa10.47□□□□□ -0.73
HMBOX1-216ENST00000561377 DCAF5Q96JK2 942 aa10.47□□□□□ -0.73
HMBOX1-216ENST00000561377 SFI1A8K8P3 1242 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms