RNA–Protein interactions for RNA: ENST00000561225.1

MARK3-225, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-225ENST00000561225 PHF14O94880 888 aa11.11□□□□□ -0.63
MARK3-225ENST00000561225 HDGFL2Q7Z4V5 671 aaPredicted RBP11.11□□□□□ -0.63
MARK3-225ENST00000561225 TNS4Q8IZW8 715 aa11.11□□□□□ -0.63
MARK3-225ENST00000561225 RBM46Q8TBY0 533 aaKnown RBP11.11□□□□□ -0.63
MARK3-225ENST00000561225 TMC1Q8TDI8 760 aa11.11□□□□□ -0.63
MARK3-225ENST00000561225 L3MBTL2Q969R5 705 aa11.11□□□□□ -0.63
MARK3-225ENST00000561225 AK7Q96M32 723 aa11.11□□□□□ -0.63
MARK3-225ENST00000561225 SLC12A5Q9H2X9 1139 aa11.11□□□□□ -0.63
MARK3-225ENST00000561225 C4BP0C0L5 1744 aa11.11□□□□□ -0.63
MARK3-225ENST00000561225 TAF1LQ8IZX4 1826 aa11.1□□□□□ -0.63
MARK3-225ENST00000561225 A0A1W2PP64 1363 aa11.1□□□□□ -0.63
MARK3-225ENST00000561225 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
MARK3-225ENST00000561225 PXDNLA1KZ92 1463 aa11.09□□□□□ -0.63
MARK3-225ENST00000561225 FBLN1P23142 703 aa11.09□□□□□ -0.63
MARK3-225ENST00000561225 SSFA2P28290 1259 aa11.09□□□□□ -0.63
MARK3-225ENST00000561225 NBPF6Q5VWK0 638 aa11.09□□□□□ -0.63
MARK3-225ENST00000561225 MPRIPQ6WCQ1 1025 aa11.09□□□□□ -0.63
MARK3-225ENST00000561225 NBPF4Q96M43 638 aa11.09□□□□□ -0.63
MARK3-225ENST00000561225 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
MARK3-225ENST00000561225 AMPHP49418 695 aa11.08□□□□□ -0.64
MARK3-225ENST00000561225 USHBP1Q8N6Y0 703 aa11.08□□□□□ -0.64
MARK3-225ENST00000561225 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
MARK3-225ENST00000561225 TERF2IPQ9NYB0 399 aa11.08□□□□□ -0.64
MARK3-225ENST00000561225 UBR3Q6ZT12 1888 aa11.08□□□□□ -0.64
MARK3-225ENST00000561225 RGPD2P0DJD1 1756 aa11.08□□□□□ -0.64
MARK3-225ENST00000561225 FSTL1Q12841 308 aa11.07□□□□□ -0.64
MARK3-225ENST00000561225 RAPGEF4Q8WZA2 1011 aa11.07□□□□□ -0.64
MARK3-225ENST00000561225 SMARCC1Q92922 1105 aaPredicted RBP11.07□□□□□ -0.64
MARK3-225ENST00000561225 BCS1LQ9Y276 419 aa11.07□□□□□ -0.64
MARK3-225ENST00000561225 PCDH11XQ9BZA7 1347 aa11.07□□□□□ -0.64
MARK3-225ENST00000561225 PCDH11YQ9BZA8 1340 aa11.07□□□□□ -0.64
MARK3-225ENST00000561225 CYP27B1O15528 508 aa11.06□□□□□ -0.64
MARK3-225ENST00000561225 MMP10P09238 476 aa11.06□□□□□ -0.64
MARK3-225ENST00000561225 TGFB2P61812 414 aa11.06□□□□□ -0.64
MARK3-225ENST00000561225 ARHGAP27Q6ZUM4 889 aa11.06□□□□□ -0.64
MARK3-225ENST00000561225 LINC00116Q8NCU8 138 aa11.06□□□□□ -0.64
MARK3-225ENST00000561225 COG3Q96JB2 828 aa11.06□□□□□ -0.64
MARK3-225ENST00000561225 KIAA1551Q9HCM1 1747 aa11.06□□□□□ -0.64
MARK3-225ENST00000561225 RTL1A6NKG5 1358 aa11.05□□□□□ -0.64
MARK3-225ENST00000561225 A0A0G2JLW4 131 aa11.05□□□□□ -0.64
MARK3-225ENST00000561225 TATP17735 454 aaPredicted RBP11.05□□□□□ -0.64
MARK3-225ENST00000561225 MICALL2Q8IY33 904 aa11.05□□□□□ -0.64
MARK3-225ENST00000561225 C16orf71Q8IYS4 520 aaPredicted RBP11.05□□□□□ -0.64
MARK3-225ENST00000561225 HS6ST3Q8IZP7 471 aa11.05□□□□□ -0.64
MARK3-225ENST00000561225 C10orf71Q711Q0 1435 aa11.04□□□□□ -0.64
MARK3-225ENST00000561225 LOC102724428A0A0B4J2F2 783 aa11.04□□□□□ -0.64
MARK3-225ENST00000561225 GNPATO15228 680 aa11.04□□□□□ -0.64
MARK3-225ENST00000561225 SIK1P57059 783 aa11.04□□□□□ -0.64
MARK3-225ENST00000561225 C9orf131Q5VYM1 1079 aa11.04□□□□□ -0.64
MARK3-225ENST00000561225 PIGBQ92521 554 aa11.04□□□□□ -0.64
MARK3-225ENST00000561225 KIF13BQ9NQT8 1826 aa11.04□□□□□ -0.64
MARK3-225ENST00000561225 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
MARK3-225ENST00000561225 FCHSD2O94868 740 aa11.03□□□□□ -0.64
MARK3-225ENST00000561225 RRS1Q15050 365 aaKnown RBP11.03□□□□□ -0.64
MARK3-225ENST00000561225 MFRPQ9BY79 579 aa11.03□□□□□ -0.64
MARK3-225ENST00000561225 KCPQ6ZWJ8 1503 aa11.03□□□□□ -0.64
MARK3-225ENST00000561225 N4BP2Q86UW6 1770 aaPredicted RBP11.03□□□□□ -0.64
MARK3-225ENST00000561225 MAP2P11137 1827 aaKnown RBP11.02□□□□□ -0.64
MARK3-225ENST00000561225 SMG6Q86US8 1419 aaKnown RBP11.02□□□□□ -0.64
MARK3-225ENST00000561225 DPEP1P16444 411 aa11.02□□□□□ -0.65
MARK3-225ENST00000561225 ITPK1Q13572 414 aa11.02□□□□□ -0.65
MARK3-225ENST00000561225 GPR153Q6NV75 609 aa11.02□□□□□ -0.65
MARK3-225ENST00000561225 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.65
MARK3-225ENST00000561225 MS4A4AQ96JQ5 239 aa11.02□□□□□ -0.65
MARK3-225ENST00000561225 PUS7Q96PZ0 661 aaKnown RBP11.02□□□□□ -0.65
MARK3-225ENST00000561225 RYDENQ9NUL5 291 aaKnown RBP11.02□□□□□ -0.65
MARK3-225ENST00000561225 HSPA1AP0DMV8 641 aaKnown RBP11.01□□□□□ -0.65
MARK3-225ENST00000561225 HSPA1BP0DMV9 641 aaKnown RBP11.01□□□□□ -0.65
MARK3-225ENST00000561225 KCNA3P22001 575 aa11.01□□□□□ -0.65
MARK3-225ENST00000561225 NKX1-1Q15270 411 aaPredicted RBP11.01□□□□□ -0.65
MARK3-225ENST00000561225 FBXO22Q8NEZ5 403 aa11.01□□□□□ -0.65
MARK3-225ENST00000561225 RRAGCQ9HB90 399 aa11.01□□□□□ -0.65
MARK3-225ENST00000561225 KDM2BQ8NHM5 1336 aa11.01□□□□□ -0.65
MARK3-225ENST00000561225 ITGB4P16144 1822 aa11□□□□□ -0.65
MARK3-225ENST00000561225 ATP6V1AP38606 617 aa11□□□□□ -0.65
MARK3-225ENST00000561225 HSP90AB2PQ58FF8 381 aa11□□□□□ -0.65
MARK3-225ENST00000561225 NLGN1Q8N2Q7 840 aa11□□□□□ -0.65
MARK3-225ENST00000561225 SMC1BQ8NDV3 1235 aa11□□□□□ -0.65
MARK3-225ENST00000561225 SIN3AQ96ST3 1273 aa11□□□□□ -0.65
MARK3-225ENST00000561225 CARD11Q9BXL7 1154 aa11□□□□□ -0.65
MARK3-225ENST00000561225 ASAP1Q9ULH1 1129 aa11□□□□□ -0.65
MARK3-225ENST00000561225 TMF1P82094 1093 aa10.99□□□□□ -0.65
MARK3-225ENST00000561225 TMEM92Q6UXU6 159 aa10.99□□□□□ -0.65
MARK3-225ENST00000561225 CCDC87Q9NVE4 849 aa10.99□□□□□ -0.65
MARK3-225ENST00000561225 RNF181Q9P0P0 153 aa10.99□□□□□ -0.65
MARK3-225ENST00000561225 INSRP06213 1382 aa10.99□□□□□ -0.65
MARK3-225ENST00000561225 PKD1L3Q7Z443 1732 aa10.98□□□□□ -0.65
MARK3-225ENST00000561225 BRCA1P38398 1863 aaKnown RBP10.98□□□□□ -0.65
MARK3-225ENST00000561225 TRAPPC3LQ5T215 181 aa10.98□□□□□ -0.65
MARK3-225ENST00000561225 DCAF5Q96JK2 942 aa10.98□□□□□ -0.65
MARK3-225ENST00000561225 TMOD3Q9NYL9 352 aa10.98□□□□□ -0.65
MARK3-225ENST00000561225 C4AP0C0L4 1744 aa10.98□□□□□ -0.65
MARK3-225ENST00000561225 FYB1O15117 783 aa10.97□□□□□ -0.65
MARK3-225ENST00000561225 SLC34A2O95436 690 aa10.97□□□□□ -0.65
MARK3-225ENST00000561225 GYS1P13807 737 aa10.97□□□□□ -0.65
MARK3-225ENST00000561225 ARHGEF1Q92888 912 aaKnown RBP10.97□□□□□ -0.65
MARK3-225ENST00000561225 GGNBP2Q9H3C7 697 aa10.97□□□□□ -0.65
MARK3-225ENST00000561225 PIM2Q9P1W9 311 aa10.97□□□□□ -0.65
MARK3-225ENST00000561225 RTCBQ9Y3I0 505 aaKnown RBP10.97□□□□□ -0.65
MARK3-225ENST00000561225 FLT4P35916 1363 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms