RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 TNP2Q05952 138 aa9.25□□□□□ -0.93
USP8-216ENST00000561206 PRRT3Q5FWE3 981 aa9.25□□□□□ -0.93
USP8-216ENST00000561206 ZNF468Q5VIY5 522 aaPredicted RBP9.25□□□□□ -0.93
USP8-216ENST00000561206 ATP4AP20648 1035 aa9.24□□□□□ -0.93
USP8-216ENST00000561206 ATXN7O15265 892 aaPredicted RBP9.23□□□□□ -0.93
USP8-216ENST00000561206 APBA3O96018 575 aa9.23□□□□□ -0.93
USP8-216ENST00000561206 MAPTP10636 758 aaKnown RBP9.23□□□□□ -0.93
USP8-216ENST00000561206 RFC5P40937 340 aa9.23□□□□□ -0.93
USP8-216ENST00000561206 ESCO1Q5FWF5 840 aa9.23□□□□□ -0.93
USP8-216ENST00000561206 HYAL3O43820 417 aaPredicted RBP9.22□□□□□ -0.93
USP8-216ENST00000561206 NR1H3Q13133 447 aa9.22□□□□□ -0.93
USP8-216ENST00000561206 COL9A3Q14050 684 aaPredicted RBP9.22□□□□□ -0.93
USP8-216ENST00000561206 GJD4Q96KN9 370 aaPredicted RBP9.22□□□□□ -0.93
USP8-216ENST00000561206 NACC1Q96RE7 527 aa9.22□□□□□ -0.93
USP8-216ENST00000561206 PRDM6Q9NQX0 595 aa9.22□□□□□ -0.93
USP8-216ENST00000561206 MYCP01106 439 aaPredicted RBP9.21□□□□□ -0.94
USP8-216ENST00000561206 TBC1D9Q6ZT07 1266 aa9.21□□□□□ -0.94
USP8-216ENST00000561206 KRTAP4-7Q9BYR0 210 aa9.21□□□□□ -0.94
USP8-216ENST00000561206 SLC24A3Q9HC58 644 aa9.21□□□□□ -0.94
USP8-216ENST00000561206 ARID1BQ8NFD5 2236 aaPredicted RBP9.2□□□□□ -0.94
USP8-216ENST00000561206 ELOA3CA0A087WX78 387 aaPredicted RBP9.2□□□□□ -0.94
USP8-216ENST00000561206 ELOA3DA6NLF2 546 aaPredicted RBP9.2□□□□□ -0.94
USP8-216ENST00000561206 ELOA3BQ3SY89 546 aa9.2□□□□□ -0.94
USP8-216ENST00000561206 ELOA3Q8NG57 546 aa9.2□□□□□ -0.94
USP8-216ENST00000561206 FAM157BP0CG42 384 aa9.19□□□□□ -0.94
USP8-216ENST00000561206 CD33P20138 364 aa9.19□□□□□ -0.94
USP8-216ENST00000561206 DDRGK1Q96HY6 314 aa9.19□□□□□ -0.94
USP8-216ENST00000561206 PCBP4P57723 403 aaKnown RBP9.18□□□□□ -0.94
USP8-216ENST00000561206 ZNF330Q9Y3S2 320 aaPredicted RBP9.17□□□□□ -0.94
USP8-216ENST00000561206 DCDC2BA2VCK2 349 aa9.16□□□□□ -0.94
USP8-216ENST00000561206 PLA2G4AP47712 749 aa9.16□□□□□ -0.94
USP8-216ENST00000561206 TMEM259Q4ZIN3 620 aa9.16□□□□□ -0.94
USP8-216ENST00000561206 SAMD5Q5TGI4 173 aa9.16□□□□□ -0.94
USP8-216ENST00000561206 CCDC85AQ96PX6 553 aaPredicted RBP9.16□□□□□ -0.94
USP8-216ENST00000561206 CDCA7Q9BWT1 371 aaPredicted RBP9.16□□□□□ -0.94
USP8-216ENST00000561206 ETNK1Q9HBU6 452 aa9.16□□□□□ -0.94
USP8-216ENST00000561206 A0A1W2PNR3 127 aa9.15□□□□□ -0.94
USP8-216ENST00000561206 ADARB2-AS1A8MUL3 147 aa9.15□□□□□ -0.94
USP8-216ENST00000561206 EFSO43281 561 aa9.15□□□□□ -0.94
USP8-216ENST00000561206 LAMC2Q13753 1193 aa9.15□□□□□ -0.94
USP8-216ENST00000561206 TLR1Q15399 786 aa9.15□□□□□ -0.94
USP8-216ENST00000561206 ALAS2P22557 587 aa9.14□□□□□ -0.95
USP8-216ENST00000561206 MCTP1Q6DN14 999 aa9.14□□□□□ -0.95
USP8-216ENST00000561206 KHNYNO15037 678 aaKnown RBP9.13□□□□□ -0.95
USP8-216ENST00000561206 GPR37L1O60883 481 aa9.13□□□□□ -0.95
USP8-216ENST00000561206 TRIM28Q13263 835 aaKnown RBP9.13□□□□□ -0.95
USP8-216ENST00000561206 ADGRE1Q14246 886 aa9.13□□□□□ -0.95
USP8-216ENST00000561206 LCE1DQ5T752 114 aa9.13□□□□□ -0.95
USP8-216ENST00000561206 ZNF295-AS1Q8N0V1 137 aa9.13□□□□□ -0.95
USP8-216ENST00000561206 FAM117AQ9C073 453 aa9.13□□□□□ -0.95
USP8-216ENST00000561206 PRR12Q9ULL5 1215 aa9.13□□□□□ -0.95
USP8-216ENST00000561206 ATP1B4Q9UN42 357 aaPredicted RBP9.13□□□□□ -0.95
USP8-216ENST00000561206 NIFKQ9BYG3 293 aaKnown RBP9.12□□□□□ -0.95
USP8-216ENST00000561206 MARK1Q9P0L2 795 aa9.12□□□□□ -0.95
USP8-216ENST00000561206 C9orf172C9J069 976 aa9.11□□□□□ -0.95
USP8-216ENST00000561206 FAM229AH3BQW9 127 aa9.11□□□□□ -0.95
USP8-216ENST00000561206 SIN3BO75182 1162 aa9.11□□□□□ -0.95
USP8-216ENST00000561206 ZDHHC3Q9NYG2 299 aa9.11□□□□□ -0.95
USP8-216ENST00000561206 STARD13Q9Y3M8 1113 aa9.11□□□□□ -0.95
USP8-216ENST00000561206 NID1P14543 1247 aa9.1□□□□□ -0.95
USP8-216ENST00000561206 MBTPS1Q14703 1052 aa9.1□□□□□ -0.95
USP8-216ENST00000561206 TNFRSF25Q93038 417 aa9.1□□□□□ -0.95
USP8-216ENST00000561206 STRN4Q9NRL3 753 aa9.1□□□□□ -0.95
USP8-216ENST00000561206 CEP126Q9P2H0 1117 aa9.1□□□□□ -0.95
USP8-216ENST00000561206 COL17A1Q9UMD9 1497 aaPredicted RBP9.09□□□□□ -0.95
USP8-216ENST00000561206 M0R082 166 aa9.09□□□□□ -0.95
USP8-216ENST00000561206 SOCS7O14512 581 aa9.09□□□□□ -0.95
USP8-216ENST00000561206 GRIK4Q16099 956 aa9.09□□□□□ -0.95
USP8-216ENST00000561206 SYT9Q86SS6 491 aa9.09□□□□□ -0.95
USP8-216ENST00000561206 ZNF417Q8TAU3 575 aa9.09□□□□□ -0.95
USP8-216ENST00000561206 ZNF587Q96SQ5 575 aaPredicted RBP9.09□□□□□ -0.95
USP8-216ENST00000561206 ZIC5Q96T25 663 aa9.09□□□□□ -0.95
USP8-216ENST00000561206 KDM4CQ9H3R0 1056 aa9.09□□□□□ -0.95
USP8-216ENST00000561206 USP4Q13107 963 aa9.08□□□□□ -0.96
USP8-216ENST00000561206 MICALL1Q8N3F8 863 aa9.08□□□□□ -0.96
USP8-216ENST00000561206 FMNL2Q96PY5 1086 aa9.08□□□□□ -0.96
USP8-216ENST00000561206 STAU1O95793 577 aaKnown RBP9.07□□□□□ -0.96
USP8-216ENST00000561206 SCNN1DP51172 638 aa9.07□□□□□ -0.96
USP8-216ENST00000561206 NBPF1Q3BBV0 1214 aa9.07□□□□□ -0.96
USP8-216ENST00000561206 ARSJQ5FYB0 599 aaPredicted RBP9.07□□□□□ -0.96
USP8-216ENST00000561206 TXNRD3Q86VQ6 643 aa9.07□□□□□ -0.96
USP8-216ENST00000561206 SSBP4Q9BWG4 385 aaPredicted RBP9.07□□□□□ -0.96
USP8-216ENST00000561206 ALBP02768 609 aa9.06□□□□□ -0.96
USP8-216ENST00000561206 INHAP05111 366 aa9.06□□□□□ -0.96
USP8-216ENST00000561206 SELPP16109 830 aa9.06□□□□□ -0.96
USP8-216ENST00000561206 AIDAQ96BJ3 306 aa9.06□□□□□ -0.96
USP8-216ENST00000561206 GOPCQ9HD26 462 aa9.06□□□□□ -0.96
USP8-216ENST00000561206 ELNP15502 786 aa9.05□□□□□ -0.96
USP8-216ENST00000561206 C20orf204Q6ZNR8 217 aa9.05□□□□□ -0.96
USP8-216ENST00000561206 PHTF2Q8N3S3 785 aa9.05□□□□□ -0.96
USP8-216ENST00000561206 LENG1Q96BZ8 264 aaPredicted RBP9.05□□□□□ -0.96
USP8-216ENST00000561206 RNF112Q9ULX5 631 aa9.05□□□□□ -0.96
USP8-216ENST00000561206 COBLO75128 1261 aa9.04□□□□□ -0.96
USP8-216ENST00000561206 TATP17735 454 aaPredicted RBP9.04□□□□□ -0.96
USP8-216ENST00000561206 TXKP42681 527 aa9.04□□□□□ -0.96
USP8-216ENST00000561206 CHIC2Q9UKJ5 165 aa9.04□□□□□ -0.96
USP8-216ENST00000561206 IQSEC3Q9UPP2 1182 aaPredicted RBP9.04□□□□□ -0.96
USP8-216ENST00000561206 PAX4O43316 350 aa9.03□□□□□ -0.96
USP8-216ENST00000561206 YBX3P16989 372 aaKnown RBP eCLIP9.03□□□□□ -0.96
USP8-216ENST00000561206 SMTNP53814 917 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms