RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 TEFQ10587 303 aa36.35■■■■□ 3.41
SNRPA1-215ENST00000561187 CHRNA5P30532 468 aa36.34■■■■□ 3.41
SNRPA1-215ENST00000561187 IL17REQ8NFR9 667 aa36.34■■■■□ 3.41
SNRPA1-215ENST00000561187 KCNA3P22001 575 aa36.33■■■■□ 3.41
SNRPA1-215ENST00000561187 PRKAR2BP31323 418 aa36.33■■■■□ 3.41
SNRPA1-215ENST00000561187 CFAP53Q96M91 514 aa36.33■■■■□ 3.41
SNRPA1-215ENST00000561187 PHACTR3Q96KR7 559 aa36.31■■■■□ 3.4
SNRPA1-215ENST00000561187 CEP350Q5VT06 3117 aa36.3■■■■□ 3.4
SNRPA1-215ENST00000561187 TM4SF1P30408 202 aa36.3■■■■□ 3.4
SNRPA1-215ENST00000561187 VSIG10Q8N0Z9 540 aa36.3■■■■□ 3.4
SNRPA1-215ENST00000561187 ZNF496Q96IT1 587 aaPredicted RBP36.3■■■■□ 3.4
SNRPA1-215ENST00000561187 NARFQ9UHQ1 456 aa36.3■■■■□ 3.4
SNRPA1-215ENST00000561187 SIPA1L3O60292 1781 aaPredicted RBP36.3■■■■□ 3.4
SNRPA1-215ENST00000561187 NFIXQ14938 502 aa36.29■■■■□ 3.4
SNRPA1-215ENST00000561187 PIM2Q9P1W9 311 aa36.29■■■■□ 3.4
SNRPA1-215ENST00000561187 ZNF330Q9Y3S2 320 aaPredicted RBP36.29■■■■□ 3.4
SNRPA1-215ENST00000561187 RSPH6AQ9H0K4 717 aa36.28■■■■□ 3.4
SNRPA1-215ENST00000561187 AFDNP55196 1824 aaKnown RBP36.28■■■■□ 3.4
SNRPA1-215ENST00000561187 ARFGEF1Q9Y6D6 1849 aa36.27■■■■□ 3.4
SNRPA1-215ENST00000561187 BCL2L12Q9HB09 334 aa36.27■■■■□ 3.4
SNRPA1-215ENST00000561187 PPP2R1AP30153 589 aa36.26■■■■□ 3.4
SNRPA1-215ENST00000561187 DALRD3Q5D0E6 543 aaKnown RBP36.26■■■■□ 3.4
SNRPA1-215ENST00000561187 ZNF790Q6PG37 636 aa36.26■■■■□ 3.4
SNRPA1-215ENST00000561187 HEG1Q9ULI3 1381 aa36.26■■■■□ 3.39
SNRPA1-215ENST00000561187 BICDL1Q6ZP65 573 aa36.25■■■■□ 3.39
SNRPA1-215ENST00000561187 STARD3NLO95772 234 aa36.24■■■■□ 3.39
SNRPA1-215ENST00000561187 U2AF1L5P0DN76 240 aaPredicted RBP36.24■■■■□ 3.39
SNRPA1-215ENST00000561187 U2AF1Q01081 240 aaKnown RBP eCLIP36.24■■■■□ 3.39
SNRPA1-215ENST00000561187 KCNQ3O43525 872 aa36.22■■■■□ 3.39
SNRPA1-215ENST00000561187 NUDCQ9Y266 331 aa36.22■■■■□ 3.39
SNRPA1-215ENST00000561187 CEMIPQ8WUJ3 1361 aa36.2■■■■□ 3.39
SNRPA1-215ENST00000561187 KIF3CO14782 793 aa36.2■■■■□ 3.39
SNRPA1-215ENST00000561187 SERPINB2P05120 415 aa36.2■■■■□ 3.39
SNRPA1-215ENST00000561187 C9orf131Q5VYM1 1079 aa36.2■■■■□ 3.39
SNRPA1-215ENST00000561187 CARMIL3Q8ND23 1372 aa36.19■■■■□ 3.38
SNRPA1-215ENST00000561187 NRXN2Q9P2S2 1712 aa36.18■■■■□ 3.38
SNRPA1-215ENST00000561187 BTBD11A6QL63 1104 aa36.18■■■■□ 3.38
SNRPA1-215ENST00000561187 EIF5P55010 431 aaKnown RBP36.18■■■■□ 3.38
SNRPA1-215ENST00000561187 FMNL2Q96PY5 1086 aa36.18■■■■□ 3.38
SNRPA1-215ENST00000561187 TBC1D2BQ9UPU7 963 aa36.17■■■■□ 3.38
SNRPA1-215ENST00000561187 SCN7AQ01118 1682 aa36.16■■■■□ 3.38
SNRPA1-215ENST00000561187 MCM10Q7L590 875 aa36.16■■■■□ 3.38
SNRPA1-215ENST00000561187 A1BGP04217 495 aa36.15■■■■□ 3.38
SNRPA1-215ENST00000561187 PIP4K2AP48426 406 aaPredicted RBP36.14■■■■□ 3.38
SNRPA1-215ENST00000561187 TBC1D9BQ66K14 1250 aa36.14■■■■□ 3.38
SNRPA1-215ENST00000561187 NMRK2Q9NPI5 230 aa36.14■■■■□ 3.38
SNRPA1-215ENST00000561187 RNF181Q9P0P0 153 aa36.14■■■■□ 3.38
SNRPA1-215ENST00000561187 A0A087WZG4 1122 aa36.13■■■■□ 3.37
SNRPA1-215ENST00000561187 DCTN1Q14203 1278 aa36.13■■■■□ 3.37
SNRPA1-215ENST00000561187 RASSF7Q02833 373 aa36.12■■■■□ 3.37
SNRPA1-215ENST00000561187 CCDC24Q8N4L8 307 aa36.12■■■■□ 3.37
SNRPA1-215ENST00000561187 RTF1Q92541 710 aaKnown RBP36.11■■■■□ 3.37
SNRPA1-215ENST00000561187 TEX13AQ9BXU3 409 aaPredicted RBP36.11■■■■□ 3.37
SNRPA1-215ENST00000561187 PRAMEF22A3QJZ6 481 aa36.1■■■■□ 3.37
SNRPA1-215ENST00000561187 HSPA6P17066 643 aa36.1■■■■□ 3.37
SNRPA1-215ENST00000561187 C2CD5Q86YS7 1000 aa36.1■■■■□ 3.37
SNRPA1-215ENST00000561187 DLEC1Q9Y238 1755 aa36.09■■■■□ 3.37
SNRPA1-215ENST00000561187 IL6STP40189 918 aaPredicted RBP36.07■■■■□ 3.36
SNRPA1-215ENST00000561187 NPM2Q86SE8 214 aaKnown RBP36.07■■■■□ 3.36
SNRPA1-215ENST00000561187 USP16Q9Y5T5 823 aa36.06■■■■□ 3.36
SNRPA1-215ENST00000561187 ANKRD31Q8N7Z5 1873 aa36.05■■■■□ 3.36
SNRPA1-215ENST00000561187 SBF1O95248 1867 aa36.03■■■■□ 3.36
SNRPA1-215ENST00000561187 H0YIN7 160 aa36.02■■■■□ 3.36
SNRPA1-215ENST00000561187 CAMTA2O94983 1202 aa36.02■■■■□ 3.36
SNRPA1-215ENST00000561187 TTLL6Q8N841 843 aa36.02■■■■□ 3.36
SNRPA1-215ENST00000561187 BCORQ6W2J9 1755 aa36.02■■■■□ 3.36
SNRPA1-215ENST00000561187 COL11A2P13942 1736 aaPredicted RBP36.01■■■■□ 3.36
SNRPA1-215ENST00000561187 DZIP3Q86Y13 1208 aaKnown RBP36.01■■■■□ 3.36
SNRPA1-215ENST00000561187 NPHP1O15259 732 aa36■■■■□ 3.35
SNRPA1-215ENST00000561187 PRR5LQ6MZQ0 368 aa36■■■■□ 3.35
SNRPA1-215ENST00000561187 ZNF219Q9P2Y4 722 aaPredicted RBP36■■■■□ 3.35
SNRPA1-215ENST00000561187 ZNF622Q969S3 477 aaKnown RBP eCLIP35.99■■■■□ 3.35
SNRPA1-215ENST00000561187 MIS18AQ9NYP9 233 aa35.99■■■■□ 3.35
SNRPA1-215ENST00000561187 TOMM70O94826 608 aa35.98■■■■□ 3.35
SNRPA1-215ENST00000561187 SNRPA1P09661 255 aaKnown RBP35.97■■■■□ 3.35
SNRPA1-215ENST00000561187 SETDB2Q96T68 719 aa35.96■■■■□ 3.35
SNRPA1-215ENST00000561187 PRELPP51888 382 aa35.95■■■■□ 3.35
SNRPA1-215ENST00000561187 C16orf71Q8IYS4 520 aaPredicted RBP35.95■■■■□ 3.35
SNRPA1-215ENST00000561187 CNBD1Q8NA66 436 aa35.95■■■■□ 3.35
SNRPA1-215ENST00000561187 DLG5Q8TDM6 1919 aa35.95■■■■□ 3.34
SNRPA1-215ENST00000561187 KDM2BQ8NHM5 1336 aa35.94■■■■□ 3.34
SNRPA1-215ENST00000561187 NEFMP07197 916 aa35.92■■■■□ 3.34
SNRPA1-215ENST00000561187 BRIP1Q9BX63 1249 aa35.92■■■■□ 3.34
SNRPA1-215ENST00000561187 RRAGCQ9HB90 399 aa35.92■■■■□ 3.34
SNRPA1-215ENST00000561187 TIAM2Q8IVF5 1701 aa35.91■■■■□ 3.34
SNRPA1-215ENST00000561187 CACNA1SQ13698 1873 aa35.91■■■■□ 3.34
SNRPA1-215ENST00000561187 PDE6BP35913 854 aa35.91■■■■□ 3.34
SNRPA1-215ENST00000561187 NFKBIEO00221 500 aa35.9■■■■□ 3.34
SNRPA1-215ENST00000561187 HTATSF1O43719 755 aaKnown RBP35.9■■■■□ 3.34
SNRPA1-215ENST00000561187 LMNB1P20700 586 aa35.9■■■■□ 3.34
SNRPA1-215ENST00000561187 THUMPD2Q9BTF0 503 aaKnown RBP35.9■■■■□ 3.34
SNRPA1-215ENST00000561187 CCDC88AQ3V6T2 1871 aa35.9■■■■□ 3.34
SNRPA1-215ENST00000561187 TNRC6CQ9HCJ0 1690 aaKnown RBP35.89■■■■□ 3.34
SNRPA1-215ENST00000561187 NBPF26B4DH59 902 aa35.89■■■■□ 3.34
SNRPA1-215ENST00000561187 C21orf2O43822 256 aa35.89■■■■□ 3.34
SNRPA1-215ENST00000561187 ST5P78524 1137 aa35.89■■■■□ 3.34
SNRPA1-215ENST00000561187 TAF7Q15545 349 aaPredicted RBP35.89■■■■□ 3.34
SNRPA1-215ENST00000561187 NBPF10Q6P3W6 841 aaKnown RBP35.89■■■■□ 3.34
SNRPA1-215ENST00000561187 NBPF15Q8N660 670 aa35.89■■■■□ 3.34
SNRPA1-215ENST00000561187 LAMB4A4D0S4 1761 aa35.87■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms