RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 DEKP35659 375 aaKnown RBP20.34■□□□□ 0.85
MEIS3-209ENST00000561040 BEND3Q5T5X7 828 aa20.34■□□□□ 0.85
MEIS3-209ENST00000561040 KSR2Q6VAB6 950 aa20.34■□□□□ 0.85
MEIS3-209ENST00000561040 ADCY9O60503 1353 aa20.34■□□□□ 0.85
MEIS3-209ENST00000561040 FMNL2Q96PY5 1086 aa20.33■□□□□ 0.85
MEIS3-209ENST00000561040 ERVV-2B6SEH9 535 aa20.32■□□□□ 0.84
MEIS3-209ENST00000561040 SNRPA1P09661 255 aaKnown RBP20.32■□□□□ 0.84
MEIS3-209ENST00000561040 NKX1-1Q15270 411 aaPredicted RBP20.32■□□□□ 0.84
MEIS3-209ENST00000561040 SHANK3Q9BYB0 1731 aa20.32■□□□□ 0.84
MEIS3-209ENST00000561040 PLEKHM2Q8IWE5 1019 aa20.32■□□□□ 0.84
MEIS3-209ENST00000561040 LTBP4Q8N2S1 1624 aa20.31■□□□□ 0.84
MEIS3-209ENST00000561040 LRRFIP2Q9Y608 721 aaKnown RBP20.31■□□□□ 0.84
MEIS3-209ENST00000561040 BECN1Q14457 450 aa20.3■□□□□ 0.84
MEIS3-209ENST00000561040 SLC39A6Q13433 755 aa20.3■□□□□ 0.84
MEIS3-209ENST00000561040 UBR2Q8IWV8 1755 aa20.29■□□□□ 0.84
MEIS3-209ENST00000561040 TTC22Q5TAA0 569 aa20.29■□□□□ 0.84
MEIS3-209ENST00000561040 ZNF496Q96IT1 587 aaPredicted RBP20.29■□□□□ 0.84
MEIS3-209ENST00000561040 STRN4Q9NRL3 753 aa20.29■□□□□ 0.84
MEIS3-209ENST00000561040 MAP3K2Q9Y2U5 619 aa20.29■□□□□ 0.84
MEIS3-209ENST00000561040 PAPPAQ13219 1627 aa20.29■□□□□ 0.84
MEIS3-209ENST00000561040 ERBB4Q15303 1308 aa20.28■□□□□ 0.84
MEIS3-209ENST00000561040 SSH3Q8TE77 659 aa20.28■□□□□ 0.84
MEIS3-209ENST00000561040 CDC45O75419 566 aa20.27■□□□□ 0.84
MEIS3-209ENST00000561040 LARP1Q6PKG0 1096 aaKnown RBP20.27■□□□□ 0.84
MEIS3-209ENST00000561040 LINS1Q8NG48 757 aa20.27■□□□□ 0.84
MEIS3-209ENST00000561040 C22orf23Q9BZE7 217 aa20.27■□□□□ 0.84
MEIS3-209ENST00000561040 LRRCC1Q9C099 1032 aa20.27■□□□□ 0.84
MEIS3-209ENST00000561040 PLCH1Q4KWH8 1693 aa20.27■□□□□ 0.84
MEIS3-209ENST00000561040 PRAMEF22A3QJZ6 481 aa20.27■□□□□ 0.84
MEIS3-209ENST00000561040 RAB11FIP3O75154 756 aa20.27■□□□□ 0.84
MEIS3-209ENST00000561040 ANXA1P04083 346 aa20.27■□□□□ 0.84
MEIS3-209ENST00000561040 PDIA6Q15084 440 aa20.27■□□□□ 0.84
MEIS3-209ENST00000561040 PROSER3Q2NL68 480 aa20.27■□□□□ 0.84
MEIS3-209ENST00000561040 OSBPL3Q9H4L5 887 aa20.27■□□□□ 0.84
MEIS3-209ENST00000561040 MFAP1P55081 439 aaKnown RBP20.26■□□□□ 0.83
MEIS3-209ENST00000561040 PNMA6EA0A0J9YXQ4 647 aa20.25■□□□□ 0.83
MEIS3-209ENST00000561040 GLI3P10071 1580 aa20.25■□□□□ 0.83
MEIS3-209ENST00000561040 POLA2Q14181 598 aa20.25■□□□□ 0.83
MEIS3-209ENST00000561040 HSP90AB4PQ58FF6 505 aa20.25■□□□□ 0.83
MEIS3-209ENST00000561040 NEXNQ0ZGT2 675 aa20.24■□□□□ 0.83
MEIS3-209ENST00000561040 MTX1Q13505 466 aa20.24■□□□□ 0.83
MEIS3-209ENST00000561040 C9orf78Q9NZ63 289 aaPredicted RBP20.24■□□□□ 0.83
MEIS3-209ENST00000561040 COL16A1Q07092 1604 aaPredicted RBP20.23■□□□□ 0.83
MEIS3-209ENST00000561040 BTG4Q9NY30 223 aa20.23■□□□□ 0.83
MEIS3-209ENST00000561040 EXOC6BQ9Y2D4 811 aa20.23■□□□□ 0.83
MEIS3-209ENST00000561040 PHLPP1O60346 1717 aa20.23■□□□□ 0.83
MEIS3-209ENST00000561040 UTYO14607 1347 aa20.23■□□□□ 0.83
MEIS3-209ENST00000561040 NBPF7P0C2Y1 421 aaPredicted RBP20.23■□□□□ 0.83
MEIS3-209ENST00000561040 CASC1Q6TDU7 716 aa20.23■□□□□ 0.83
MEIS3-209ENST00000561040 RIC3Q7Z5B4 369 aa20.23■□□□□ 0.83
MEIS3-209ENST00000561040 APBB1O00213 710 aa20.22■□□□□ 0.83
MEIS3-209ENST00000561040 SMARCA5O60264 1052 aaPredicted RBP20.22■□□□□ 0.83
MEIS3-209ENST00000561040 GSPT1P15170 499 aaKnown RBP20.22■□□□□ 0.83
MEIS3-209ENST00000561040 RBM25P49756 843 aaKnown RBP20.22■□□□□ 0.83
MEIS3-209ENST00000561040 TBC1D9Q6ZT07 1266 aa20.22■□□□□ 0.83
MEIS3-209ENST00000561040 PPP1R42Q7Z4L9 355 aa20.22■□□□□ 0.83
MEIS3-209ENST00000561040 C16orf71Q8IYS4 520 aaPredicted RBP20.22■□□□□ 0.83
MEIS3-209ENST00000561040 WNK3Q9BYP7 1800 aa20.21■□□□□ 0.83
MEIS3-209ENST00000561040 AOX1Q06278 1338 aa20.21■□□□□ 0.83
MEIS3-209ENST00000561040 SRGAP3O43295 1099 aa20.2■□□□□ 0.82
MEIS3-209ENST00000561040 KCPQ6ZWJ8 1503 aa20.2■□□□□ 0.82
MEIS3-209ENST00000561040 TNS2Q63HR2 1409 aa20.2■□□□□ 0.82
MEIS3-209ENST00000561040 GRM8O00222 908 aa20.2■□□□□ 0.82
MEIS3-209ENST00000561040 AIMP1Q12904 312 aaKnown RBP20.2■□□□□ 0.82
MEIS3-209ENST00000561040 DDX54Q8TDD1 881 aaKnown RBP20.2■□□□□ 0.82
MEIS3-209ENST00000561040 XAGE3Q8WTP9 111 aa20.2■□□□□ 0.82
MEIS3-209ENST00000561040 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
MEIS3-209ENST00000561040 DISP2A7MBM2 1401 aa20.2■□□□□ 0.82
MEIS3-209ENST00000561040 LRP6O75581 1613 aa20.19■□□□□ 0.82
MEIS3-209ENST00000561040 ARFGEF2Q9Y6D5 1785 aa20.19■□□□□ 0.82
MEIS3-209ENST00000561040 MYL6BP14649 208 aa20.19■□□□□ 0.82
MEIS3-209ENST00000561040 PDE1AP54750 535 aa20.19■□□□□ 0.82
MEIS3-209ENST00000561040 COPS6Q7L5N1 327 aa20.19■□□□□ 0.82
MEIS3-209ENST00000561040 METTL22Q9BUU2 404 aaPredicted RBP20.19■□□□□ 0.82
MEIS3-209ENST00000561040 TOGARAM1Q9Y4F4 1720 aa20.19■□□□□ 0.82
MEIS3-209ENST00000561040 ANKRD13DQ6ZTN6 518 aa20.18■□□□□ 0.82
MEIS3-209ENST00000561040 TUBGCP6Q96RT7 1819 aa20.18■□□□□ 0.82
MEIS3-209ENST00000561040 SALL3Q9BXA9 1300 aa20.18■□□□□ 0.82
MEIS3-209ENST00000561040 SURF6O75683 361 aaKnown RBP20.18■□□□□ 0.82
MEIS3-209ENST00000561040 LRP10Q7Z4F1 713 aa20.18■□□□□ 0.82
MEIS3-209ENST00000561040 OTUD7AQ8TE49 926 aaPredicted RBP20.18■□□□□ 0.82
MEIS3-209ENST00000561040 KIF1BPQ96EK5 621 aa20.18■□□□□ 0.82
MEIS3-209ENST00000561040 STAP2Q9UGK3 403 aa20.18■□□□□ 0.82
MEIS3-209ENST00000561040 AFDNP55196 1824 aaKnown RBP20.17■□□□□ 0.82
MEIS3-209ENST00000561040 MX1P20591 662 aa20.17■□□□□ 0.82
MEIS3-209ENST00000561040 CWF19L2Q2TBE0 894 aaKnown RBP20.16■□□□□ 0.82
MEIS3-209ENST00000561040 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
MEIS3-209ENST00000561040 CDCA7Q9BWT1 371 aaPredicted RBP20.16■□□□□ 0.82
MEIS3-209ENST00000561040 TMOD3Q9NYL9 352 aa20.16■□□□□ 0.82
MEIS3-209ENST00000561040 SDSP20132 328 aa20.16■□□□□ 0.82
MEIS3-209ENST00000561040 ERC1Q8IUD2 1116 aa20.16■□□□□ 0.82
MEIS3-209ENST00000561040 NEURL1BA8MQ27 555 aa20.15■□□□□ 0.82
MEIS3-209ENST00000561040 PRKCSHP14314 528 aaPredicted RBP20.15■□□□□ 0.82
MEIS3-209ENST00000561040 PLBD2Q8NHP8 589 aa20.15■□□□□ 0.82
MEIS3-209ENST00000561040 TEX13AQ9BXU3 409 aaPredicted RBP20.15■□□□□ 0.82
MEIS3-209ENST00000561040 ITGB4P16144 1822 aa20.14■□□□□ 0.82
MEIS3-209ENST00000561040 USP35Q9P2H5 1018 aa20.14■□□□□ 0.81
MEIS3-209ENST00000561040 COL15A1P39059 1388 aa20.14■□□□□ 0.81
MEIS3-209ENST00000561040 TOM1O60784 492 aa20.13■□□□□ 0.81
MEIS3-209ENST00000561040 IGKV5-2P06315 115 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms