RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 STARD3NLO95772 234 aa25.01■■□□□ 1.59
LINC01220-202ENST00000561000 PPP2R1AP30153 589 aa25.01■■□□□ 1.59
LINC01220-202ENST00000561000 ZNF496Q96IT1 587 aaPredicted RBP25.01■■□□□ 1.59
LINC01220-202ENST00000561000 PIM2Q9P1W9 311 aa25.01■■□□□ 1.59
LINC01220-202ENST00000561000 NARFQ9UHQ1 456 aa25.01■■□□□ 1.59
LINC01220-202ENST00000561000 KCPQ6ZWJ8 1503 aa25.01■■□□□ 1.59
LINC01220-202ENST00000561000 U2AF1L5P0DN76 240 aaPredicted RBP25■■□□□ 1.59
LINC01220-202ENST00000561000 U2AF1Q01081 240 aaKnown RBP eCLIP25■■□□□ 1.59
LINC01220-202ENST00000561000 ZNF790Q6PG37 636 aa25■■□□□ 1.59
LINC01220-202ENST00000561000 RSPH6AQ9H0K4 717 aa25■■□□□ 1.59
LINC01220-202ENST00000561000 COL15A1P39059 1388 aa25■■□□□ 1.59
LINC01220-202ENST00000561000 CHRNA5P30532 468 aa24.98■■□□□ 1.59
LINC01220-202ENST00000561000 NFIXQ14938 502 aa24.98■■□□□ 1.59
LINC01220-202ENST00000561000 N4BP2Q86UW6 1770 aaPredicted RBP24.96■■□□□ 1.59
LINC01220-202ENST00000561000 DALRD3Q5D0E6 543 aaKnown RBP24.96■■□□□ 1.59
LINC01220-202ENST00000561000 TEX13AQ9BXU3 409 aaPredicted RBP24.96■■□□□ 1.59
LINC01220-202ENST00000561000 BCL2L12Q9HB09 334 aa24.96■■□□□ 1.59
LINC01220-202ENST00000561000 ZNF330Q9Y3S2 320 aaPredicted RBP24.96■■□□□ 1.59
LINC01220-202ENST00000561000 KIF13BQ9NQT8 1826 aa24.96■■□□□ 1.59
LINC01220-202ENST00000561000 ADAMTS7Q9UKP4 1686 aa24.95■■□□□ 1.58
LINC01220-202ENST00000561000 BTBD11A6QL63 1104 aa24.95■■□□□ 1.58
LINC01220-202ENST00000561000 HEG1Q9ULI3 1381 aa24.94■■□□□ 1.58
LINC01220-202ENST00000561000 A0A087WZG4 1122 aa24.94■■□□□ 1.58
LINC01220-202ENST00000561000 SERPINB2P05120 415 aa24.94■■□□□ 1.58
LINC01220-202ENST00000561000 EIF5P55010 431 aaKnown RBP24.94■■□□□ 1.58
LINC01220-202ENST00000561000 BICDL1Q6ZP65 573 aa24.94■■□□□ 1.58
LINC01220-202ENST00000561000 FMNL2Q96PY5 1086 aa24.94■■□□□ 1.58
LINC01220-202ENST00000561000 KIAA1551Q9HCM1 1747 aa24.93■■□□□ 1.58
LINC01220-202ENST00000561000 KCNQ3O43525 872 aa24.93■■□□□ 1.58
LINC01220-202ENST00000561000 RTF1Q92541 710 aaKnown RBP24.93■■□□□ 1.58
LINC01220-202ENST00000561000 CEMIPQ8WUJ3 1361 aa24.92■■□□□ 1.58
LINC01220-202ENST00000561000 A1BGP04217 495 aa24.91■■□□□ 1.58
LINC01220-202ENST00000561000 MCM10Q7L590 875 aa24.91■■□□□ 1.58
LINC01220-202ENST00000561000 TBC1D2BQ9UPU7 963 aa24.91■■□□□ 1.58
LINC01220-202ENST00000561000 C9orf131Q5VYM1 1079 aa24.9■■□□□ 1.58
LINC01220-202ENST00000561000 NPM2Q86SE8 214 aaKnown RBP24.9■■□□□ 1.58
LINC01220-202ENST00000561000 KIF3CO14782 793 aa24.88■■□□□ 1.57
LINC01220-202ENST00000561000 DCTN1Q14203 1278 aa24.88■■□□□ 1.57
LINC01220-202ENST00000561000 IL6STP40189 918 aaPredicted RBP24.87■■□□□ 1.57
LINC01220-202ENST00000561000 TBC1D9BQ66K14 1250 aa24.87■■□□□ 1.57
LINC01220-202ENST00000561000 USP16Q9Y5T5 823 aa24.86■■□□□ 1.57
LINC01220-202ENST00000561000 VIRMAQ69YN4 1812 aaKnown RBP24.85■■□□□ 1.57
LINC01220-202ENST00000561000 C2CD5Q86YS7 1000 aa24.85■■□□□ 1.57
LINC01220-202ENST00000561000 RNF181Q9P0P0 153 aa24.84■■□□□ 1.57
LINC01220-202ENST00000561000 UBR2Q8IWV8 1755 aa24.84■■□□□ 1.57
LINC01220-202ENST00000561000 PRAMEF22A3QJZ6 481 aa24.83■■□□□ 1.57
LINC01220-202ENST00000561000 H0YIN7 160 aa24.83■■□□□ 1.57
LINC01220-202ENST00000561000 HTATSF1O43719 755 aaKnown RBP24.83■■□□□ 1.57
LINC01220-202ENST00000561000 PIP4K2AP48426 406 aaPredicted RBP24.83■■□□□ 1.57
LINC01220-202ENST00000561000 NEFMP07197 916 aa24.82■■□□□ 1.56
LINC01220-202ENST00000561000 SNRPA1P09661 255 aaKnown RBP24.82■■□□□ 1.56
LINC01220-202ENST00000561000 HSPA6P17066 643 aa24.82■■□□□ 1.56
LINC01220-202ENST00000561000 CCDC24Q8N4L8 307 aa24.82■■□□□ 1.56
LINC01220-202ENST00000561000 TTLL6Q8N841 843 aa24.82■■□□□ 1.56
LINC01220-202ENST00000561000 DZIP3Q86Y13 1208 aaKnown RBP24.81■■□□□ 1.56
LINC01220-202ENST00000561000 NMRK2Q9NPI5 230 aa24.81■■□□□ 1.56
LINC01220-202ENST00000561000 CAMTA2O94983 1202 aa24.8■■□□□ 1.56
LINC01220-202ENST00000561000 SETDB2Q96T68 719 aa24.8■■□□□ 1.56
LINC01220-202ENST00000561000 CARMIL3Q8ND23 1372 aa24.8■■□□□ 1.56
LINC01220-202ENST00000561000 NPHP1O15259 732 aa24.79■■□□□ 1.56
LINC01220-202ENST00000561000 TAF7Q15545 349 aaPredicted RBP24.79■■□□□ 1.56
LINC01220-202ENST00000561000 ZNF622Q969S3 477 aaKnown RBP eCLIP24.79■■□□□ 1.56
LINC01220-202ENST00000561000 MIS18AQ9NYP9 233 aa24.79■■□□□ 1.56
LINC01220-202ENST00000561000 RASSF7Q02833 373 aa24.78■■□□□ 1.56
LINC01220-202ENST00000561000 PRR5LQ6MZQ0 368 aa24.78■■□□□ 1.56
LINC01220-202ENST00000561000 BRCA1P38398 1863 aaKnown RBP24.78■■□□□ 1.56
LINC01220-202ENST00000561000 PDE6BP35913 854 aa24.77■■□□□ 1.56
LINC01220-202ENST00000561000 ZEB1P37275 1124 aaPredicted RBP24.77■■□□□ 1.56
LINC01220-202ENST00000561000 BRIP1Q9BX63 1249 aa24.77■■□□□ 1.56
LINC01220-202ENST00000561000 SIPA1L3O60292 1781 aaPredicted RBP24.77■■□□□ 1.56
LINC01220-202ENST00000561000 TOMM70O94826 608 aa24.76■■□□□ 1.55
LINC01220-202ENST00000561000 ZNF219Q9P2Y4 722 aaPredicted RBP24.75■■□□□ 1.55
LINC01220-202ENST00000561000 C16orf71Q8IYS4 520 aaPredicted RBP24.74■■□□□ 1.55
LINC01220-202ENST00000561000 CNBD1Q8NA66 436 aa24.74■■□□□ 1.55
LINC01220-202ENST00000561000 AFDNP55196 1824 aaKnown RBP24.74■■□□□ 1.55
LINC01220-202ENST00000561000 ARFGEF1Q9Y6D6 1849 aa24.73■■□□□ 1.55
LINC01220-202ENST00000561000 NRXN2Q9P2S2 1712 aa24.73■■□□□ 1.55
LINC01220-202ENST00000561000 KDM2BQ8NHM5 1336 aa24.73■■□□□ 1.55
LINC01220-202ENST00000561000 PLEKHF1Q96S99 279 aa24.73■■□□□ 1.55
LINC01220-202ENST00000561000 PDZRN3Q9UPQ7 1066 aa24.73■■□□□ 1.55
LINC01220-202ENST00000561000 NBPF26B4DH59 902 aa24.72■■□□□ 1.55
LINC01220-202ENST00000561000 LMNB1P20700 586 aa24.72■■□□□ 1.55
LINC01220-202ENST00000561000 ST5P78524 1137 aa24.72■■□□□ 1.55
LINC01220-202ENST00000561000 NBPF10Q6P3W6 841 aaKnown RBP24.72■■□□□ 1.55
LINC01220-202ENST00000561000 NBPF15Q8N660 670 aa24.72■■□□□ 1.55
LINC01220-202ENST00000561000 RRAGCQ9HB90 399 aa24.72■■□□□ 1.55
LINC01220-202ENST00000561000 NFE2L2Q16236 605 aa24.71■■□□□ 1.55
LINC01220-202ENST00000561000 CLEC4GQ6UXB4 293 aa24.71■■□□□ 1.55
LINC01220-202ENST00000561000 PNISRQ8TF01 805 aaKnown RBP24.71■■□□□ 1.55
LINC01220-202ENST00000561000 PNNQ9H307 717 aaKnown RBP24.71■■□□□ 1.55
LINC01220-202ENST00000561000 ZNF652Q9Y2D9 606 aa24.71■■□□□ 1.55
LINC01220-202ENST00000561000 C21orf2O43822 256 aa24.7■■□□□ 1.54
LINC01220-202ENST00000561000 PRELPP51888 382 aa24.7■■□□□ 1.54
LINC01220-202ENST00000561000 NBPF5PQ86XG9 351 aaPredicted RBP24.7■■□□□ 1.54
LINC01220-202ENST00000561000 THUMPD2Q9BTF0 503 aaKnown RBP24.7■■□□□ 1.54
LINC01220-202ENST00000561000 MAPK8IP3Q9UPT6 1336 aa24.69■■□□□ 1.54
LINC01220-202ENST00000561000 NGEFQ8N5V2 710 aa24.68■■□□□ 1.54
LINC01220-202ENST00000561000 NFKBIEO00221 500 aa24.67■■□□□ 1.54
LINC01220-202ENST00000561000 RBM46Q8TBY0 533 aaKnown RBP24.67■■□□□ 1.54
LINC01220-202ENST00000561000 NIP7Q9Y221 180 aaKnown RBP eCLIP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms