RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 IL13P35225 146 aa25.35■■□□□ 1.65
TPM1-226ENST00000560959 ADAMTS7Q9UKP4 1686 aa25.35■■□□□ 1.65
TPM1-226ENST00000560959 TJP1Q07157 1748 aa25.34■■□□□ 1.65
TPM1-226ENST00000560959 SBF1O95248 1867 aa25.34■■□□□ 1.65
TPM1-226ENST00000560959 NFIXQ14938 502 aa25.34■■□□□ 1.65
TPM1-226ENST00000560959 TTLL6Q8N841 843 aa25.33■■□□□ 1.65
TPM1-226ENST00000560959 VSIG10Q8N0Z9 540 aa25.32■■□□□ 1.64
TPM1-226ENST00000560959 SERPINB2P05120 415 aa25.31■■□□□ 1.64
TPM1-226ENST00000560959 RASSF7Q02833 373 aa25.31■■□□□ 1.64
TPM1-226ENST00000560959 LGR6Q9HBX8 967 aa25.31■■□□□ 1.64
TPM1-226ENST00000560959 EIF4G2P78344 907 aaKnown RBP eCLIP25.3■■□□□ 1.64
TPM1-226ENST00000560959 CLSPNQ9HAW4 1339 aa25.3■■□□□ 1.64
TPM1-226ENST00000560959 RNMTO43148 476 aaKnown RBP25.29■■□□□ 1.64
TPM1-226ENST00000560959 TNS4Q8IZW8 715 aa25.29■■□□□ 1.64
TPM1-226ENST00000560959 BCL2L12Q9HB09 334 aa25.29■■□□□ 1.64
TPM1-226ENST00000560959 COL15A1P39059 1388 aa25.29■■□□□ 1.64
TPM1-226ENST00000560959 SCN11AQ9UI33 1791 aa25.28■■□□□ 1.64
TPM1-226ENST00000560959 H0YIN7 160 aa25.28■■□□□ 1.64
TPM1-226ENST00000560959 PRELPP51888 382 aa25.28■■□□□ 1.64
TPM1-226ENST00000560959 TRIM26Q12899 539 aaPredicted RBP25.28■■□□□ 1.64
TPM1-226ENST00000560959 PDZRN3Q9UPQ7 1066 aa25.27■■□□□ 1.64
TPM1-226ENST00000560959 ZBTB1Q9Y2K1 713 aa25.27■■□□□ 1.64
TPM1-226ENST00000560959 NRXN2Q9P2S2 1712 aa25.26■■□□□ 1.63
TPM1-226ENST00000560959 SLC39A6Q13433 755 aa25.26■■□□□ 1.63
TPM1-226ENST00000560959 C2CD5Q86YS7 1000 aa25.26■■□□□ 1.63
TPM1-226ENST00000560959 KNSTRNQ9Y448 316 aa25.26■■□□□ 1.63
TPM1-226ENST00000560959 MRC1P22897 1456 aa25.26■■□□□ 1.63
TPM1-226ENST00000560959 DPY19L2Q6NUT2 758 aa25.25■■□□□ 1.63
TPM1-226ENST00000560959 HSPA5P11021 654 aaKnown RBP25.24■■□□□ 1.63
TPM1-226ENST00000560959 NFKBIEO00221 500 aa25.23■■□□□ 1.63
TPM1-226ENST00000560959 A0A087WZG4 1122 aa25.22■■□□□ 1.63
TPM1-226ENST00000560959 POTECB2RU33 542 aa25.22■■□□□ 1.63
TPM1-226ENST00000560959 AFDNP55196 1824 aaKnown RBP25.21■■□□□ 1.63
TPM1-226ENST00000560959 STARD3NLO95772 234 aa25.21■■□□□ 1.63
TPM1-226ENST00000560959 HSPA1AP0DMV8 641 aaKnown RBP25.21■■□□□ 1.63
TPM1-226ENST00000560959 HSPA1BP0DMV9 641 aaKnown RBP25.21■■□□□ 1.63
TPM1-226ENST00000560959 EIF5P55010 431 aaKnown RBP25.21■■□□□ 1.63
TPM1-226ENST00000560959 BRIP1Q9BX63 1249 aa25.2■■□□□ 1.62
TPM1-226ENST00000560959 DLEC1Q9Y238 1755 aa25.19■■□□□ 1.62
TPM1-226ENST00000560959 PDE6BP35913 854 aa25.19■■□□□ 1.62
TPM1-226ENST00000560959 CANXP27824 592 aaKnown RBP25.18■■□□□ 1.62
TPM1-226ENST00000560959 MTHFSDQ2M296 383 aaKnown RBP25.18■■□□□ 1.62
TPM1-226ENST00000560959 AMER1Q5JTC6 1135 aaPredicted RBP25.18■■□□□ 1.62
TPM1-226ENST00000560959 TEX13AQ9BXU3 409 aaPredicted RBP25.18■■□□□ 1.62
TPM1-226ENST00000560959 CAPN15O75808 1086 aa25.17■■□□□ 1.62
TPM1-226ENST00000560959 LTBP3Q9NS15 1303 aa25.16■■□□□ 1.62
TPM1-226ENST00000560959 HMOX1P09601 288 aa25.16■■□□□ 1.62
TPM1-226ENST00000560959 CARMIL3Q8ND23 1372 aa25.16■■□□□ 1.62
TPM1-226ENST00000560959 ERFEQ4G0M1 354 aa25.15■■□□□ 1.62
TPM1-226ENST00000560959 BICDL1Q6ZP65 573 aa25.15■■□□□ 1.62
TPM1-226ENST00000560959 TTC5Q8N0Z6 440 aa25.15■■□□□ 1.62
TPM1-226ENST00000560959 ZNF622Q969S3 477 aaKnown RBP eCLIP25.15■■□□□ 1.626e-7■■□□□ 13.8
TPM1-226ENST00000560959 TBC1D9BQ66K14 1250 aa25.14■■□□□ 1.62
TPM1-226ENST00000560959 CREBZFQ9NS37 354 aa25.14■■□□□ 1.62
TPM1-226ENST00000560959 C21orf2O43822 256 aa25.13■■□□□ 1.61
TPM1-226ENST00000560959 IL6STP40189 918 aaPredicted RBP25.12■■□□□ 1.61
TPM1-226ENST00000560959 PRR5LQ6MZQ0 368 aa25.12■■□□□ 1.61
TPM1-226ENST00000560959 CHADLQ6NUI6 762 aa25.12■■□□□ 1.61
TPM1-226ENST00000560959 DIAPH1O60610 1272 aaKnown RBP25.11■■□□□ 1.61
TPM1-226ENST00000560959 CNKSR1Q969H4 720 aa25.11■■□□□ 1.61
TPM1-226ENST00000560959 TIAM2Q8IVF5 1701 aa25.11■■□□□ 1.61
TPM1-226ENST00000560959 SOGA3Q5TF21 947 aa25.1■■□□□ 1.61
TPM1-226ENST00000560959 ZNF790Q6PG37 636 aa25.1■■□□□ 1.61
TPM1-226ENST00000560959 ZNF496Q96IT1 587 aaPredicted RBP25.1■■□□□ 1.61
TPM1-226ENST00000560959 TAOK3Q9H2K8 898 aa25.1■■□□□ 1.61
TPM1-226ENST00000560959 HEG1Q9ULI3 1381 aa25.09■■□□□ 1.61
TPM1-226ENST00000560959 STYK1Q6J9G0 422 aa25.09■■□□□ 1.61
TPM1-226ENST00000560959 UBR2Q8IWV8 1755 aa25.08■■□□□ 1.61
TPM1-226ENST00000560959 SETDB2Q96T68 719 aa25.08■■□□□ 1.61
TPM1-226ENST00000560959 TBC1D2BQ9UPU7 963 aa25.08■■□□□ 1.61
TPM1-226ENST00000560959 CCDC88AQ3V6T2 1871 aa25.08■■□□□ 1.61
TPM1-226ENST00000560959 TEFQ10587 303 aa25.07■■□□□ 1.6
TPM1-226ENST00000560959 SRGNP10124 158 aa25.06■■□□□ 1.6
TPM1-226ENST00000560959 NPM2Q86SE8 214 aaKnown RBP25.06■■□□□ 1.6
TPM1-226ENST00000560959 IL17REQ8NFR9 667 aa25.06■■□□□ 1.6
TPM1-226ENST00000560959 FER1L6Q2WGJ9 1857 aa25.05■■□□□ 1.6
TPM1-226ENST00000560959 IQCA1LA6NCM1 817 aa25.05■■□□□ 1.6
TPM1-226ENST00000560959 GNAT3A8MTJ3 354 aa25.05■■□□□ 1.6
TPM1-226ENST00000560959 DDNO94850 711 aaPredicted RBP25.05■■□□□ 1.6
TPM1-226ENST00000560959 CNBD1Q8NA66 436 aa25.05■■□□□ 1.6
TPM1-226ENST00000560959 GAS2L2Q8NHY3 880 aa25.05■■□□□ 1.6
TPM1-226ENST00000560959 MASTLQ96GX5 879 aa25.05■■□□□ 1.6
TPM1-226ENST00000560959 ZNF219Q9P2Y4 722 aaPredicted RBP25.05■■□□□ 1.6
TPM1-226ENST00000560959 DICER1Q9UPY3 1922 aaKnown RBP25.04■■□□□ 1.6
TPM1-226ENST00000560959 CAMTA2O94983 1202 aa25.04■■□□□ 1.6
TPM1-226ENST00000560959 ST5P78524 1137 aa25.04■■□□□ 1.6
TPM1-226ENST00000560959 L3MBTL3Q96JM7 780 aaPredicted RBP25.04■■□□□ 1.6
TPM1-226ENST00000560959 FMNL2Q96PY5 1086 aa25.04■■□□□ 1.6
TPM1-226ENST00000560959 ANKRD31Q8N7Z5 1873 aa25.04■■□□□ 1.6
TPM1-226ENST00000560959 PER1O15534 1290 aaPredicted RBP25.03■■□□□ 1.6
TPM1-226ENST00000560959 PRPF40BQ6NWY9 871 aaKnown RBP25.03■■□□□ 1.6
TPM1-226ENST00000560959 LDHDQ86WU2 507 aa25.02■■□□□ 1.6
TPM1-226ENST00000560959 CCDC24Q8N4L8 307 aa25.02■■□□□ 1.6
TPM1-226ENST00000560959 MKRN1Q9UHC7 482 aaKnown RBP25.02■■□□□ 1.6
TPM1-226ENST00000560959 VIRMAQ69YN4 1812 aaKnown RBP25.02■■□□□ 1.6
TPM1-226ENST00000560959 NPHP1O15259 732 aa25.01■■□□□ 1.59
TPM1-226ENST00000560959 POTEIP0CG38 1075 aa25.01■■□□□ 1.59
TPM1-226ENST00000560959 POTEJP0CG39 1038 aa25.01■■□□□ 1.59
TPM1-226ENST00000560959 CLEC4GQ6UXB4 293 aa25.01■■□□□ 1.59
TPM1-226ENST00000560959 C7orf43Q8WVR3 580 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms