RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 PCGF6Q9BYE7 350 aa25.43■■□□□ 1.66
TRIP4-211ENST00000560920 RNMTO43148 476 aaKnown RBP25.42■■□□□ 1.66
TRIP4-211ENST00000560920 NFIXQ14938 502 aa25.42■■□□□ 1.66
TRIP4-211ENST00000560920 KLRG1Q96E93 195 aa25.42■■□□□ 1.66
TRIP4-211ENST00000560920 NARFQ9UHQ1 456 aa25.42■■□□□ 1.66
TRIP4-211ENST00000560920 KNSTRNQ9Y448 316 aa25.42■■□□□ 1.66
TRIP4-211ENST00000560920 JMYQ8N9B5 988 aa25.4■■□□□ 1.66
TRIP4-211ENST00000560920 BCL2L12Q9HB09 334 aa25.4■■□□□ 1.66
TRIP4-211ENST00000560920 PRELPP51888 382 aa25.39■■□□□ 1.66
TRIP4-211ENST00000560920 RASSF7Q02833 373 aa25.39■■□□□ 1.66
TRIP4-211ENST00000560920 AMER1Q5JTC6 1135 aaPredicted RBP25.39■■□□□ 1.66
TRIP4-211ENST00000560920 ZBTB1Q9Y2K1 713 aa25.39■■□□□ 1.66
TRIP4-211ENST00000560920 AFDNP55196 1824 aaKnown RBP25.39■■□□□ 1.65
TRIP4-211ENST00000560920 MRC1P22897 1456 aa25.39■■□□□ 1.65
TRIP4-211ENST00000560920 COL15A1P39059 1388 aa25.37■■□□□ 1.65
TRIP4-211ENST00000560920 SERPINB2P05120 415 aa25.37■■□□□ 1.65
TRIP4-211ENST00000560920 HMOX1P09601 288 aa25.37■■□□□ 1.65
TRIP4-211ENST00000560920 NRXN2Q9P2S2 1712 aa25.37■■□□□ 1.65
TRIP4-211ENST00000560920 TNRC6CQ9HCJ0 1690 aaKnown RBP25.36■■□□□ 1.65
TRIP4-211ENST00000560920 MTHFSDQ2M296 383 aaKnown RBP25.36■■□□□ 1.65
TRIP4-211ENST00000560920 ZC3H4Q9UPT8 1303 aaKnown RBP25.35■■□□□ 1.65
TRIP4-211ENST00000560920 LMNB1P20700 586 aa25.34■■□□□ 1.65
TRIP4-211ENST00000560920 VSIG10Q8N0Z9 540 aa25.34■■□□□ 1.65
TRIP4-211ENST00000560920 SMC1BQ8NDV3 1235 aa25.34■■□□□ 1.65
TRIP4-211ENST00000560920 VIRMAQ69YN4 1812 aaKnown RBP25.33■■□□□ 1.65
TRIP4-211ENST00000560920 TTLL6Q8N841 843 aa25.33■■□□□ 1.65
TRIP4-211ENST00000560920 GLTPD2A6NH11 291 aa25.32■■□□□ 1.64
TRIP4-211ENST00000560920 COL13A1Q5TAT6 717 aaPredicted RBP25.32■■□□□ 1.64
TRIP4-211ENST00000560920 C2CD5Q86YS7 1000 aa25.32■■□□□ 1.64
TRIP4-211ENST00000560920 DLEC1Q9Y238 1755 aa25.31■■□□□ 1.64
TRIP4-211ENST00000560920 CANXP27824 592 aaKnown RBP25.31■■□□□ 1.64
TRIP4-211ENST00000560920 CARMIL3Q8ND23 1372 aa25.31■■□□□ 1.64
TRIP4-211ENST00000560920 VEGFAP15692 232 aaPredicted RBP25.3■■□□□ 1.64
TRIP4-211ENST00000560920 H0YIN7 160 aa25.29■■□□□ 1.64
TRIP4-211ENST00000560920 NFKBIEO00221 500 aa25.29■■□□□ 1.64
TRIP4-211ENST00000560920 EIF5P55010 431 aaKnown RBP25.29■■□□□ 1.64
TRIP4-211ENST00000560920 BICDL1Q6ZP65 573 aa25.28■■□□□ 1.64
TRIP4-211ENST00000560920 PCNTO95613 3336 aa25.28■■□□□ 1.64
TRIP4-211ENST00000560920 UBR2Q8IWV8 1755 aa25.27■■□□□ 1.64
TRIP4-211ENST00000560920 DIAPH1O60610 1272 aaKnown RBP25.27■■□□□ 1.64
TRIP4-211ENST00000560920 CCDC88AQ3V6T2 1871 aa25.26■■□□□ 1.63
TRIP4-211ENST00000560920 STARD3NLO95772 234 aa25.26■■□□□ 1.63
TRIP4-211ENST00000560920 POTECB2RU33 542 aa25.25■■□□□ 1.63
TRIP4-211ENST00000560920 PER1O15534 1290 aaPredicted RBP25.25■■□□□ 1.63
TRIP4-211ENST00000560920 TBC1D9BQ66K14 1250 aa25.25■■□□□ 1.63
TRIP4-211ENST00000560920 KIF7Q2M1P5 1343 aa25.24■■□□□ 1.63
TRIP4-211ENST00000560920 A0A087WZG4 1122 aa25.24■■□□□ 1.63
TRIP4-211ENST00000560920 ZNF496Q96IT1 587 aaPredicted RBP25.24■■□□□ 1.63
TRIP4-211ENST00000560920 TTC5Q8N0Z6 440 aa25.23■■□□□ 1.63
TRIP4-211ENST00000560920 IL17REQ8NFR9 667 aa25.23■■□□□ 1.63
TRIP4-211ENST00000560920 BRIP1Q9BX63 1249 aa25.22■■□□□ 1.63
TRIP4-211ENST00000560920 ANKRD31Q8N7Z5 1873 aa25.21■■□□□ 1.63
TRIP4-211ENST00000560920 TIAM2Q8IVF5 1701 aa25.21■■□□□ 1.63
TRIP4-211ENST00000560920 CC2D1BQ5T0F9 858 aaKnown RBP25.21■■□□□ 1.63
TRIP4-211ENST00000560920 ZNF790Q6PG37 636 aa25.21■■□□□ 1.63
TRIP4-211ENST00000560920 CCDC24Q8N4L8 307 aa25.21■■□□□ 1.63
TRIP4-211ENST00000560920 ZNF622Q969S3 477 aaKnown RBP eCLIP25.21■■□□□ 1.63
TRIP4-211ENST00000560920 TBC1D2BQ9UPU7 963 aa25.21■■□□□ 1.63
TRIP4-211ENST00000560920 HEG1Q9ULI3 1381 aa25.2■■□□□ 1.63
TRIP4-211ENST00000560920 C21orf2O43822 256 aa25.2■■□□□ 1.62
TRIP4-211ENST00000560920 PRR5LQ6MZQ0 368 aa25.2■■□□□ 1.62
TRIP4-211ENST00000560920 PDE6BP35913 854 aa25.19■■□□□ 1.62
TRIP4-211ENST00000560920 TEX13AQ9BXU3 409 aaPredicted RBP25.19■■□□□ 1.62
TRIP4-211ENST00000560920 ZNF219Q9P2Y4 722 aaPredicted RBP25.19■■□□□ 1.62
TRIP4-211ENST00000560920 PDZRN3Q9UPQ7 1066 aa25.19■■□□□ 1.62
TRIP4-211ENST00000560920 DPY19L2Q6NUT2 758 aa25.18■■□□□ 1.62
TRIP4-211ENST00000560920 GNAT3A8MTJ3 354 aa25.17■■□□□ 1.62
TRIP4-211ENST00000560920 IL6STP40189 918 aaPredicted RBP25.17■■□□□ 1.62
TRIP4-211ENST00000560920 TEFQ10587 303 aa25.17■■□□□ 1.62
TRIP4-211ENST00000560920 ERFEQ4G0M1 354 aa25.17■■□□□ 1.62
TRIP4-211ENST00000560920 A1BGP04217 495 aa25.16■■□□□ 1.62
TRIP4-211ENST00000560920 TNS4Q8IZW8 715 aa25.16■■□□□ 1.62
TRIP4-211ENST00000560920 ZNF330Q9Y3S2 320 aaPredicted RBP25.16■■□□□ 1.62
TRIP4-211ENST00000560920 COL3A1P02461 1466 aaPredicted RBP25.15■■□□□ 1.62
TRIP4-211ENST00000560920 FER1L6Q2WGJ9 1857 aa25.15■■□□□ 1.62
TRIP4-211ENST00000560920 COL11A2P13942 1736 aaPredicted RBP25.15■■□□□ 1.62
TRIP4-211ENST00000560920 SCN7AQ01118 1682 aa25.15■■□□□ 1.62
TRIP4-211ENST00000560920 DICER1Q9UPY3 1922 aaKnown RBP25.14■■□□□ 1.62
TRIP4-211ENST00000560920 SIPA1L3O60292 1781 aaPredicted RBP25.14■■□□□ 1.62
TRIP4-211ENST00000560920 U2SURPO15042 1029 aaKnown RBP25.14■■□□□ 1.62
TRIP4-211ENST00000560920 CAPN15O75808 1086 aa25.14■■□□□ 1.62
TRIP4-211ENST00000560920 CAMTA2O94983 1202 aa25.14■■□□□ 1.62
TRIP4-211ENST00000560920 HSPA1AP0DMV8 641 aaKnown RBP25.14■■□□□ 1.62
TRIP4-211ENST00000560920 HSPA1BP0DMV9 641 aaKnown RBP25.14■■□□□ 1.62
TRIP4-211ENST00000560920 GAS2L2Q8NHY3 880 aa25.14■■□□□ 1.62
TRIP4-211ENST00000560920 KCNQ3O43525 872 aa25.13■■□□□ 1.61
TRIP4-211ENST00000560920 CCER1Q8TC90 406 aaPredicted RBP25.13■■□□□ 1.61
TRIP4-211ENST00000560920 FMNL2Q96PY5 1086 aa25.13■■□□□ 1.61
TRIP4-211ENST00000560920 SETDB2Q96T68 719 aa25.13■■□□□ 1.61
TRIP4-211ENST00000560920 LTBP3Q9NS15 1303 aa25.12■■□□□ 1.61
TRIP4-211ENST00000560920 TAOK3Q9H2K8 898 aa25.11■■□□□ 1.61
TRIP4-211ENST00000560920 SLX4Q8IY92 1834 aa25.1■■□□□ 1.61
TRIP4-211ENST00000560920 CEMIPQ8WUJ3 1361 aa25.1■■□□□ 1.61
TRIP4-211ENST00000560920 SRGNP10124 158 aa25.1■■□□□ 1.61
TRIP4-211ENST00000560920 STYK1Q6J9G0 422 aa25.1■■□□□ 1.61
TRIP4-211ENST00000560920 CNBD1Q8NA66 436 aa25.1■■□□□ 1.61
TRIP4-211ENST00000560920 CNKSR1Q969H4 720 aa25.1■■□□□ 1.61
TRIP4-211ENST00000560920 DDNO94850 711 aaPredicted RBP25.09■■□□□ 1.61
TRIP4-211ENST00000560920 PHACTR3Q96KR7 559 aa25.09■■□□□ 1.61
TRIP4-211ENST00000560920 POTEIP0CG38 1075 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms