RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 SIPA1L3O60292 1781 aaPredicted RBP25.93■■□□□ 1.74
CRNDE-210ENST00000560912 CHRNA5P30532 468 aa25.93■■□□□ 1.74
CRNDE-210ENST00000560912 LGR6Q9HBX8 967 aa25.92■■□□□ 1.74
CRNDE-210ENST00000560912 COL15A1P39059 1388 aa25.92■■□□□ 1.74
CRNDE-210ENST00000560912 SCN7AQ01118 1682 aa25.91■■□□□ 1.74
CRNDE-210ENST00000560912 RNMTO43148 476 aaKnown RBP25.91■■□□□ 1.74
CRNDE-210ENST00000560912 CYP19A1P11511 503 aaPredicted RBP25.91■■□□□ 1.74
CRNDE-210ENST00000560912 USPL1Q5W0Q7 1092 aa25.91■■□□□ 1.74
CRNDE-210ENST00000560912 ZPR1O75312 459 aa25.9■■□□□ 1.74
CRNDE-210ENST00000560912 RNF181Q9P0P0 153 aa25.9■■□□□ 1.74
CRNDE-210ENST00000560912 ANKRD31Q8N7Z5 1873 aa25.89■■□□□ 1.74
CRNDE-210ENST00000560912 KDM2BQ8NHM5 1336 aa25.88■■□□□ 1.73
CRNDE-210ENST00000560912 SLC39A6Q13433 755 aa25.88■■□□□ 1.73
CRNDE-210ENST00000560912 NARFQ9UHQ1 456 aa25.88■■□□□ 1.73
CRNDE-210ENST00000560912 ZBTB1Q9Y2K1 713 aa25.88■■□□□ 1.73
CRNDE-210ENST00000560912 NFIXQ14938 502 aa25.87■■□□□ 1.73
CRNDE-210ENST00000560912 COL3A1P02461 1466 aaPredicted RBP25.86■■□□□ 1.73
CRNDE-210ENST00000560912 HMOX1P09601 288 aa25.86■■□□□ 1.73
CRNDE-210ENST00000560912 BCL2L12Q9HB09 334 aa25.86■■□□□ 1.73
CRNDE-210ENST00000560912 COL11A2P13942 1736 aaPredicted RBP25.85■■□□□ 1.73
CRNDE-210ENST00000560912 FSTL1Q12841 308 aa25.85■■□□□ 1.73
CRNDE-210ENST00000560912 C16orf71Q8IYS4 520 aaPredicted RBP25.85■■□□□ 1.73
CRNDE-210ENST00000560912 VSIG10Q8N0Z9 540 aa25.85■■□□□ 1.73
CRNDE-210ENST00000560912 KIF7Q2M1P5 1343 aa25.85■■□□□ 1.73
CRNDE-210ENST00000560912 ZC3H4Q9UPT8 1303 aaKnown RBP25.85■■□□□ 1.73
CRNDE-210ENST00000560912 MTHFSDQ2M296 383 aaKnown RBP25.84■■□□□ 1.73
CRNDE-210ENST00000560912 DICER1Q9UPY3 1922 aaKnown RBP25.84■■□□□ 1.73
CRNDE-210ENST00000560912 CARMIL3Q8ND23 1372 aa25.82■■□□□ 1.72
CRNDE-210ENST00000560912 RASSF7Q02833 373 aa25.82■■□□□ 1.72
CRNDE-210ENST00000560912 FER1L6Q2WGJ9 1857 aa25.81■■□□□ 1.72
CRNDE-210ENST00000560912 BCORQ6W2J9 1755 aa25.8■■□□□ 1.72
CRNDE-210ENST00000560912 RRAGCQ9HB90 399 aa25.8■■□□□ 1.72
CRNDE-210ENST00000560912 PER1O15534 1290 aaPredicted RBP25.79■■□□□ 1.72
CRNDE-210ENST00000560912 DIAPH1O60610 1272 aaKnown RBP25.79■■□□□ 1.72
CRNDE-210ENST00000560912 SERPINB2P05120 415 aa25.79■■□□□ 1.72
CRNDE-210ENST00000560912 PRELPP51888 382 aa25.79■■□□□ 1.72
CRNDE-210ENST00000560912 KLRG1Q96E93 195 aa25.79■■□□□ 1.72
CRNDE-210ENST00000560912 ARFGEF2Q9Y6D5 1785 aa25.79■■□□□ 1.72
CRNDE-210ENST00000560912 CACNA1SQ13698 1873 aa25.79■■□□□ 1.72
CRNDE-210ENST00000560912 HTRA3P83110 453 aa25.78■■□□□ 1.72
CRNDE-210ENST00000560912 JMYQ8N9B5 988 aa25.77■■□□□ 1.72
CRNDE-210ENST00000560912 LMNB1P20700 586 aa25.76■■□□□ 1.71
CRNDE-210ENST00000560912 EIF5P55010 431 aaKnown RBP25.76■■□□□ 1.71
CRNDE-210ENST00000560912 CANXP27824 592 aaKnown RBP25.75■■□□□ 1.71
CRNDE-210ENST00000560912 TTLL6Q8N841 843 aa25.75■■□□□ 1.71
CRNDE-210ENST00000560912 NPC1L1Q9UHC9 1359 aa25.74■■□□□ 1.71
CRNDE-210ENST00000560912 HEG1Q9ULI3 1381 aa25.74■■□□□ 1.71
CRNDE-210ENST00000560912 C2CD5Q86YS7 1000 aa25.74■■□□□ 1.71
CRNDE-210ENST00000560912 SMC1BQ8NDV3 1235 aa25.74■■□□□ 1.71
CRNDE-210ENST00000560912 NFKBIEO00221 500 aa25.73■■□□□ 1.71
CRNDE-210ENST00000560912 STARD3NLO95772 234 aa25.73■■□□□ 1.71
CRNDE-210ENST00000560912 CC2D1BQ5T0F9 858 aaKnown RBP25.73■■□□□ 1.71
CRNDE-210ENST00000560912 TTC5Q8N0Z6 440 aa25.73■■□□□ 1.71
CRNDE-210ENST00000560912 CCER1Q8TC90 406 aaPredicted RBP25.73■■□□□ 1.71
CRNDE-210ENST00000560912 PCNTO95613 3336 aa25.73■■□□□ 1.71
CRNDE-210ENST00000560912 GLTPD2A6NH11 291 aa25.72■■□□□ 1.71
CRNDE-210ENST00000560912 ZNF496Q96IT1 587 aaPredicted RBP25.72■■□□□ 1.71
CRNDE-210ENST00000560912 A0A087WZG4 1122 aa25.71■■□□□ 1.71
CRNDE-210ENST00000560912 H0YIN7 160 aa25.71■■□□□ 1.71
CRNDE-210ENST00000560912 TBC1D9BQ66K14 1250 aa25.7■■□□□ 1.7
CRNDE-210ENST00000560912 ZNF790Q6PG37 636 aa25.7■■□□□ 1.7
CRNDE-210ENST00000560912 IL17REQ8NFR9 667 aa25.7■■□□□ 1.7
CRNDE-210ENST00000560912 SLX4Q8IY92 1834 aa25.7■■□□□ 1.7
CRNDE-210ENST00000560912 BICDL1Q6ZP65 573 aa25.69■■□□□ 1.7
CRNDE-210ENST00000560912 CEMIPQ8WUJ3 1361 aa25.69■■□□□ 1.7
CRNDE-210ENST00000560912 VEGFAP15692 232 aaPredicted RBP25.68■■□□□ 1.7
CRNDE-210ENST00000560912 GAS2L2Q8NHY3 880 aa25.68■■□□□ 1.7
CRNDE-210ENST00000560912 GNAT3A8MTJ3 354 aa25.67■■□□□ 1.7
CRNDE-210ENST00000560912 TEFQ10587 303 aa25.67■■□□□ 1.7
CRNDE-210ENST00000560912 PDZRN3Q9UPQ7 1066 aa25.67■■□□□ 1.7
CRNDE-210ENST00000560912 IL6STP40189 918 aaPredicted RBP25.66■■□□□ 1.7
CRNDE-210ENST00000560912 PRR5LQ6MZQ0 368 aa25.66■■□□□ 1.7
CRNDE-210ENST00000560912 BRIP1Q9BX63 1249 aa25.66■■□□□ 1.7
CRNDE-210ENST00000560912 TEX13AQ9BXU3 409 aaPredicted RBP25.66■■□□□ 1.7
CRNDE-210ENST00000560912 U2SURPO15042 1029 aaKnown RBP25.64■■□□□ 1.7
CRNDE-210ENST00000560912 PDE6BP35913 854 aa25.63■■□□□ 1.69
CRNDE-210ENST00000560912 TBC1D2BQ9UPU7 963 aa25.63■■□□□ 1.69
CRNDE-210ENST00000560912 POTECB2RU33 542 aa25.62■■□□□ 1.69
CRNDE-210ENST00000560912 FMNL2Q96PY5 1086 aa25.62■■□□□ 1.69
CRNDE-210ENST00000560912 LTBP3Q9NS15 1303 aa25.62■■□□□ 1.69
CRNDE-210ENST00000560912 CAMTA2O94983 1202 aa25.61■■□□□ 1.69
CRNDE-210ENST00000560912 COL13A1Q5TAT6 717 aaPredicted RBP25.61■■□□□ 1.69
CRNDE-210ENST00000560912 ZNF622Q969S3 477 aaKnown RBP eCLIP25.61■■□□□ 1.692e-6■■□□□ 14.2
CRNDE-210ENST00000560912 ZNF330Q9Y3S2 320 aaPredicted RBP25.61■■□□□ 1.69
CRNDE-210ENST00000560912 C21orf2O43822 256 aa25.6■■□□□ 1.69
CRNDE-210ENST00000560912 A1BGP04217 495 aa25.6■■□□□ 1.69
CRNDE-210ENST00000560912 CCDC24Q8N4L8 307 aa25.6■■□□□ 1.69
CRNDE-210ENST00000560912 LAMB4A4D0S4 1761 aa25.59■■□□□ 1.69
CRNDE-210ENST00000560912 CNBD1Q8NA66 436 aa25.58■■□□□ 1.69
CRNDE-210ENST00000560912 SCN4AP35499 1836 aa25.58■■□□□ 1.68
CRNDE-210ENST00000560912 KCNQ3O43525 872 aa25.57■■□□□ 1.68
CRNDE-210ENST00000560912 DPY19L2Q6NUT2 758 aa25.57■■□□□ 1.68
CRNDE-210ENST00000560912 PHACTR3Q96KR7 559 aa25.57■■□□□ 1.68
CRNDE-210ENST00000560912 SETDB2Q96T68 719 aa25.57■■□□□ 1.68
CRNDE-210ENST00000560912 RSPH6AQ9H0K4 717 aa25.57■■□□□ 1.68
CRNDE-210ENST00000560912 ERFEQ4G0M1 354 aa25.56■■□□□ 1.68
CRNDE-210ENST00000560912 STYK1Q6J9G0 422 aa25.56■■□□□ 1.68
CRNDE-210ENST00000560912 ZNF219Q9P2Y4 722 aaPredicted RBP25.56■■□□□ 1.68
CRNDE-210ENST00000560912 BTBD11A6QL63 1104 aa25.55■■□□□ 1.68
CRNDE-210ENST00000560912 SRGNP10124 158 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms