RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 IL17REQ8NFR9 667 aa9.25□□□□□ -0.93
CTDSPL2-210ENST00000560834 RNF25Q96BH1 459 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL2-210ENST00000560834 THUMPD2Q9BTF0 503 aaKnown RBP9.25□□□□□ -0.93
CTDSPL2-210ENST00000560834 LGR6Q9HBX8 967 aa9.25□□□□□ -0.93
CTDSPL2-210ENST00000560834 COL5A3P25940 1745 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL2-210ENST00000560834 WWC1Q8IX03 1113 aa9.24□□□□□ -0.93
CTDSPL2-210ENST00000560834 NUP188Q5SRE5 1749 aa9.23□□□□□ -0.93
CTDSPL2-210ENST00000560834 HNRNPUQ00839 825 aaKnown RBP eCLIP9.23□□□□□ -0.93
CTDSPL2-210ENST00000560834 NGEFQ8N5V2 710 aa9.23□□□□□ -0.93
CTDSPL2-210ENST00000560834 RTF1Q92541 710 aaKnown RBP9.23□□□□□ -0.93
CTDSPL2-210ENST00000560834 ACSBG1Q96GR2 724 aa9.23□□□□□ -0.93
CTDSPL2-210ENST00000560834 SLC52A2Q9HAB3 445 aa9.23□□□□□ -0.93
CTDSPL2-210ENST00000560834 CREBZFQ9NS37 354 aa9.23□□□□□ -0.93
CTDSPL2-210ENST00000560834 TAF1LQ8IZX4 1826 aa9.23□□□□□ -0.93
CTDSPL2-210ENST00000560834 ZBED9Q6R2W3 1325 aa9.23□□□□□ -0.93
CTDSPL2-210ENST00000560834 ERVV-2B6SEH9 535 aa9.22□□□□□ -0.93
CTDSPL2-210ENST00000560834 KCNQ2O43526 872 aa9.22□□□□□ -0.93
CTDSPL2-210ENST00000560834 MNX1P50219 401 aaPredicted RBP9.22□□□□□ -0.93
CTDSPL2-210ENST00000560834 FAM196AQ6ZSG2 479 aa9.22□□□□□ -0.93
CTDSPL2-210ENST00000560834 PTF1AQ7RTS3 328 aa9.22□□□□□ -0.93
CTDSPL2-210ENST00000560834 SALL2Q9Y467 1007 aaPredicted RBP9.22□□□□□ -0.93
CTDSPL2-210ENST00000560834 ST18O60284 1047 aa9.21□□□□□ -0.94
CTDSPL2-210ENST00000560834 PRIM1P49642 420 aaKnown RBP9.21□□□□□ -0.94
CTDSPL2-210ENST00000560834 ILDR2Q71H61 639 aa9.21□□□□□ -0.94
CTDSPL2-210ENST00000560834 PIGBQ92521 554 aa9.21□□□□□ -0.94
CTDSPL2-210ENST00000560834 IL16Q14005 1332 aa9.21□□□□□ -0.94
CTDSPL2-210ENST00000560834 ZNF853P0CG23 659 aa9.2□□□□□ -0.94
CTDSPL2-210ENST00000560834 CABP4P57796 275 aa9.2□□□□□ -0.94
CTDSPL2-210ENST00000560834 TEFQ10587 303 aa9.2□□□□□ -0.94
CTDSPL2-210ENST00000560834 TSHZ2Q9NRE2 1034 aa9.2□□□□□ -0.94
CTDSPL2-210ENST00000560834 TMOD3Q9NYL9 352 aa9.2□□□□□ -0.94
CTDSPL2-210ENST00000560834 TUBGCP6Q96RT7 1819 aa9.19□□□□□ -0.94
CTDSPL2-210ENST00000560834 TRIM37O94972 964 aa9.19□□□□□ -0.94
CTDSPL2-210ENST00000560834 WDR63Q8IWG1 891 aa9.19□□□□□ -0.94
CTDSPL2-210ENST00000560834 NFATC2IPQ8NCF5 419 aa9.19□□□□□ -0.94
CTDSPL2-210ENST00000560834 SYTL4Q96C24 671 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-210ENST00000560834 FAM212AQ96EL1 285 aa9.19□□□□□ -0.94
CTDSPL2-210ENST00000560834 BCL11BQ9C0K0 894 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-210ENST00000560834 IFT57Q9NWB7 429 aa9.19□□□□□ -0.94
CTDSPL2-210ENST00000560834 FANCIQ9NVI1 1328 aa9.19□□□□□ -0.94
CTDSPL2-210ENST00000560834 PALLDQ8WX93 1383 aa9.19□□□□□ -0.94
CTDSPL2-210ENST00000560834 CHL1O00533 1208 aa9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 RIOK3O14730 519 aaKnown RBP9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 C4BP0C0L5 1744 aa9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 CALD1Q05682 793 aaKnown RBP9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 SLC39A6Q13433 755 aa9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 DCAF8Q5TAQ9 597 aa9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 KAT6BQ8WYB5 2073 aa9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 YTHDC1Q96MU7 727 aaKnown RBP9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 MBIPQ9NS73 344 aa9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 ATG3Q9NT62 314 aa9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 BABAM1Q9NWV8 329 aa9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 TAOK2Q9UL54 1235 aa9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 ASAP1Q9ULH1 1129 aa9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 HEG1Q9ULI3 1381 aa9.18□□□□□ -0.94
CTDSPL2-210ENST00000560834 BTBD11A6QL63 1104 aa9.17□□□□□ -0.94
CTDSPL2-210ENST00000560834 KCNQ3O43525 872 aa9.17□□□□□ -0.94
CTDSPL2-210ENST00000560834 GNAI1P63096 354 aa9.17□□□□□ -0.94
CTDSPL2-210ENST00000560834 GOLGA2Q08379 1002 aa9.17□□□□□ -0.94
CTDSPL2-210ENST00000560834 TAF7Q15545 349 aaPredicted RBP9.17□□□□□ -0.94
CTDSPL2-210ENST00000560834 ZNF790Q6PG37 636 aa9.17□□□□□ -0.94
CTDSPL2-210ENST00000560834 TSR2Q969E8 191 aaKnown RBP9.17□□□□□ -0.94
CTDSPL2-210ENST00000560834 CDCA7LQ96GN5 454 aa9.17□□□□□ -0.94
CTDSPL2-210ENST00000560834 MIS18AQ9NYP9 233 aa9.17□□□□□ -0.94
CTDSPL2-210ENST00000560834 TSPYL4Q9UJ04 414 aa9.17□□□□□ -0.94
CTDSPL2-210ENST00000560834 C4AP0C0L4 1744 aa9.17□□□□□ -0.94
CTDSPL2-210ENST00000560834 QSER1Q2KHR3 1735 aa9.17□□□□□ -0.94
CTDSPL2-210ENST00000560834 SLFN5Q08AF3 891 aa9.16□□□□□ -0.94
CTDSPL2-210ENST00000560834 TRMT2AQ8IZ69 625 aaKnown RBP9.16□□□□□ -0.94
CTDSPL2-210ENST00000560834 SLC4A9Q96Q91 983 aa9.16□□□□□ -0.94
CTDSPL2-210ENST00000560834 LAS1LQ9Y4W2 734 aaKnown RBP9.16□□□□□ -0.94
CTDSPL2-210ENST00000560834 UBR3Q6ZT12 1888 aa9.16□□□□□ -0.94
CTDSPL2-210ENST00000560834 E9PSI1 815 aa9.15□□□□□ -0.94
CTDSPL2-210ENST00000560834 CHRM1P11229 460 aaPredicted RBP9.15□□□□□ -0.94
CTDSPL2-210ENST00000560834 EIF4A1P60842 406 aaKnown RBP9.15□□□□□ -0.94
CTDSPL2-210ENST00000560834 KRT24Q2M2I5 525 aa9.15□□□□□ -0.94
CTDSPL2-210ENST00000560834 DUSP27Q5VZP5 1158 aa9.15□□□□□ -0.94
CTDSPL2-210ENST00000560834 ZNF496Q96IT1 587 aaPredicted RBP9.15□□□□□ -0.94
CTDSPL2-210ENST00000560834 MYH14Q7Z406 1995 aaKnown RBP9.15□□□□□ -0.95
CTDSPL2-210ENST00000560834 BCORQ6W2J9 1755 aa9.14□□□□□ -0.95
CTDSPL2-210ENST00000560834 SCN7AQ01118 1682 aa9.14□□□□□ -0.95
CTDSPL2-210ENST00000560834 TTC5Q8N0Z6 440 aa9.14□□□□□ -0.95
CTDSPL2-210ENST00000560834 UPF1Q92900 1129 aaKnown RBP eCLIP9.14□□□□□ -0.95
CTDSPL2-210ENST00000560834 SMARCC1Q92922 1105 aaPredicted RBP9.14□□□□□ -0.95
CTDSPL2-210ENST00000560834 MS4A3Q96HJ5 214 aa9.14□□□□□ -0.95
CTDSPL2-210ENST00000560834 MYH16Q9H6N6 1097 aa9.14□□□□□ -0.95
CTDSPL2-210ENST00000560834 LOC102724428A0A0B4J2F2 783 aa9.13□□□□□ -0.95
CTDSPL2-210ENST00000560834 PRAMEF22A3QJZ6 481 aa9.13□□□□□ -0.95
CTDSPL2-210ENST00000560834 PLSCR1O15162 318 aa9.13□□□□□ -0.95
CTDSPL2-210ENST00000560834 PTCD1O75127 700 aaKnown RBP9.13□□□□□ -0.95
CTDSPL2-210ENST00000560834 APBA3O96018 575 aa9.13□□□□□ -0.95
CTDSPL2-210ENST00000560834 SIK1P57059 783 aa9.13□□□□□ -0.95
CTDSPL2-210ENST00000560834 ITPK1Q13572 414 aa9.13□□□□□ -0.95
CTDSPL2-210ENST00000560834 FMNL2Q96PY5 1086 aa9.13□□□□□ -0.95
CTDSPL2-210ENST00000560834 N4BP2Q86UW6 1770 aaPredicted RBP9.12□□□□□ -0.95
CTDSPL2-210ENST00000560834 GIGYF1O75420 1035 aaPredicted RBP9.12□□□□□ -0.95
CTDSPL2-210ENST00000560834 DEFB132Q7Z7B7 95 aa9.12□□□□□ -0.95
CTDSPL2-210ENST00000560834 RASEFQ8IZ41 740 aa9.12□□□□□ -0.95
CTDSPL2-210ENST00000560834 TSPYL6Q8N831 410 aa9.12□□□□□ -0.95
CTDSPL2-210ENST00000560834 C8orf58Q8NAV2 365 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms