RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 KIF14Q15058 1648 aa8.39□□□□□ -1.07
TSPAN3-209ENST00000560715 GOLGA6L3A6NEY3 463 aa8.39□□□□□ -1.07
TSPAN3-209ENST00000560715 ESPNB1AK53 854 aa8.39□□□□□ -1.07
TSPAN3-209ENST00000560715 CD46P15529 392 aa8.39□□□□□ -1.07
TSPAN3-209ENST00000560715 CLDN10P78369 228 aa8.39□□□□□ -1.07
TSPAN3-209ENST00000560715 NAA30Q147X3 362 aaPredicted RBP8.39□□□□□ -1.07
TSPAN3-209ENST00000560715 MCF2L2Q86YR7 1114 aa8.39□□□□□ -1.07
TSPAN3-209ENST00000560715 RNF34Q969K3 372 aa8.39□□□□□ -1.07
TSPAN3-209ENST00000560715 THRAP3Q9Y2W1 955 aaKnown RBP8.39□□□□□ -1.07
TSPAN3-209ENST00000560715 XPCQ01831 940 aaPredicted RBP8.38□□□□□ -1.07
TSPAN3-209ENST00000560715 CNGB1Q14028 1251 aaPredicted RBP8.38□□□□□ -1.07
TSPAN3-209ENST00000560715 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.38□□□□□ -1.07
TSPAN3-209ENST00000560715 ADGBQ8N7X0 1667 aa8.38□□□□□ -1.07
TSPAN3-209ENST00000560715 MAGEC2Q9UBF1 373 aaPredicted RBP8.38□□□□□ -1.07
TSPAN3-209ENST00000560715 EMILIN1Q9Y6C2 1016 aa8.38□□□□□ -1.07
TSPAN3-209ENST00000560715 ATP10BO94823 1461 aa8.38□□□□□ -1.07
TSPAN3-209ENST00000560715 GPATCH8Q9UKJ3 1502 aaKnown RBP8.38□□□□□ -1.07
TSPAN3-209ENST00000560715 CDC42BPAQ5VT25 1732 aa8.37□□□□□ -1.07
TSPAN3-209ENST00000560715 ZNF76P36508 570 aa8.37□□□□□ -1.07
TSPAN3-209ENST00000560715 UTP14CQ5TAP6 766 aaKnown RBP8.37□□□□□ -1.07
TSPAN3-209ENST00000560715 EXOC6Q8TAG9 804 aa8.37□□□□□ -1.07
TSPAN3-209ENST00000560715 ABCC5O15440 1437 aa8.37□□□□□ -1.07
TSPAN3-209ENST00000560715 CROCC2H7BZ55 1655 aa8.37□□□□□ -1.07
TSPAN3-209ENST00000560715 FMNL1O95466 1100 aaPredicted RBP8.37□□□□□ -1.07
TSPAN3-209ENST00000560715 PTPRGP23470 1445 aa8.37□□□□□ -1.07
TSPAN3-209ENST00000560715 TONSLQ96HA7 1378 aa8.37□□□□□ -1.07
TSPAN3-209ENST00000560715 TGIF2Q9GZN2 237 aa8.37□□□□□ -1.07
TSPAN3-209ENST00000560715 GNL3LQ9NVN8 582 aaKnown RBP8.37□□□□□ -1.07
TSPAN3-209ENST00000560715 CAMSAP2Q08AD1 1489 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 OATP04181 439 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 ANKMY2Q8IV38 441 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 ZSCAN29Q8IWY8 852 aaPredicted RBP8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 OGFOD1Q8N543 542 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 RRP7BPQ9NSQ0 103 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 CHIC2Q9UKJ5 165 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 KDM6BO15054 1643 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 SOCS7O14512 581 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 RRP1P56182 461 aaKnown RBP8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 TMC1Q8TDI8 760 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 CLASP1Q7Z460 1538 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 K7ELQ4 463 aaPredicted RBP8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 C21orf2O43822 256 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 OCLNQ16625 522 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 FAM126AQ9BYI3 521 aaPredicted RBP8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 PANK2Q9BZ23 570 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 ZBTB3Q9H5J0 574 aa8.36□□□□□ -1.07
TSPAN3-209ENST00000560715 ABCC10Q5T3U5 1492 aa8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 TERF1P54274 439 aa8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 ARID5AQ03989 594 aa8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 TSGA10IPQ3SY00 556 aa8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 CYB5RLQ6IPT4 315 aa8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 CHST12Q9NRB3 414 aa8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 CFDP1Q9UEE9 299 aaPredicted RBP8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 ZHX1Q9UKY1 873 aaPredicted RBP8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 ERBB4Q15303 1308 aa8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 TNFRSF10BO14763 440 aa8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 SORBS3O60504 671 aa8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 LARP1Q6PKG0 1096 aaKnown RBP8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 PCDHGA10Q9Y5H3 936 aa8.35□□□□□ -1.07
TSPAN3-209ENST00000560715 HSD3B2P26439 372 aa8.34□□□□□ -1.07
TSPAN3-209ENST00000560715 C1QBPQ07021 282 aaKnown RBP8.34□□□□□ -1.07
TSPAN3-209ENST00000560715 C4orf46Q504U0 113 aa8.34□□□□□ -1.07
TSPAN3-209ENST00000560715 KIAA1211Q6ZU35 1233 aa8.34□□□□□ -1.07
TSPAN3-209ENST00000560715 MAF1Q9H063 256 aa8.34□□□□□ -1.07
TSPAN3-209ENST00000560715 ADGRL2O95490 1459 aa8.34□□□□□ -1.07
TSPAN3-209ENST00000560715 C3orf80F5H4A9 247 aa8.34□□□□□ -1.07
TSPAN3-209ENST00000560715 LDHBP07195 334 aaKnown RBP8.34□□□□□ -1.07
TSPAN3-209ENST00000560715 RBL2Q08999 1139 aa8.34□□□□□ -1.07
TSPAN3-209ENST00000560715 SYCP2LQ5T4T6 812 aa8.34□□□□□ -1.07
TSPAN3-209ENST00000560715 RGL4Q8IZJ4 473 aa8.34□□□□□ -1.07
TSPAN3-209ENST00000560715 ZNF644Q9H582 1327 aaPredicted RBP8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 GIGYF1O75420 1035 aaPredicted RBP8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 MRE11P49959 708 aa8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 DMTNQ08495 405 aa8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 REM2Q8IYK8 340 aaPredicted RBP8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 UBA5Q9GZZ9 404 aa8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 RIPK4P57078 832 aa8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 LRRC41Q15345 812 aa8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 KRBA2Q6ZNG9 492 aa8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 SPC25Q9HBM1 224 aa8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 MRVI1Q9Y6F6 885 aa8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 DENND4BO75064 1496 aaPredicted RBP8.33□□□□□ -1.08
TSPAN3-209ENST00000560715 RCCD1A6NED2 376 aa8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 DNAJC6O75061 913 aa8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 MTERF4Q7Z6M4 381 aaKnown RBP8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 STK10O94804 968 aaKnown RBP8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 FDX1P10109 184 aa8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 WDR78Q5VTH9 848 aa8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 TMEM92Q6UXU6 159 aa8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 ZCRB1Q8TBF4 217 aaKnown RBP8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 PITPNM1O00562 1244 aa8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 PDGFRBP09619 1106 aa8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 HSPA5P11021 654 aaKnown RBP8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 CLEC4GQ6UXB4 293 aa8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 MTA3Q9BTC8 594 aa8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 TMEM51Q9NW97 253 aa8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 TCEAL9Q9UHQ7 104 aa8.32□□□□□ -1.08
TSPAN3-209ENST00000560715 SHANK2Q9UPX8 1470 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms