RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 COL15A1P39059 1388 aa24.82■■□□□ 1.56
TPM1-224ENST00000560615 TJP1Q07157 1748 aa24.82■■□□□ 1.56
TPM1-224ENST00000560615 ZBTB1Q9Y2K1 713 aa24.82■■□□□ 1.56
TPM1-224ENST00000560615 KCNA3P22001 575 aa24.81■■□□□ 1.56
TPM1-224ENST00000560615 CANXP27824 592 aaKnown RBP24.8■■□□□ 1.56
TPM1-224ENST00000560615 ZNF790Q6PG37 636 aa24.8■■□□□ 1.56
TPM1-224ENST00000560615 KCPQ6ZWJ8 1503 aa24.78■■□□□ 1.56
TPM1-224ENST00000560615 HSPA6P17066 643 aa24.78■■□□□ 1.56
TPM1-224ENST00000560615 NFIXQ14938 502 aa24.78■■□□□ 1.56
TPM1-224ENST00000560615 N4BP2Q86UW6 1770 aaPredicted RBP24.77■■□□□ 1.56
TPM1-224ENST00000560615 COL3A1P02461 1466 aaPredicted RBP24.77■■□□□ 1.56
TPM1-224ENST00000560615 IL17REQ8NFR9 667 aa24.77■■□□□ 1.56
TPM1-224ENST00000560615 FMNL2Q96PY5 1086 aa24.77■■□□□ 1.56
TPM1-224ENST00000560615 KIF3CO14782 793 aa24.76■■□□□ 1.55
TPM1-224ENST00000560615 SERPINB2P05120 415 aa24.76■■□□□ 1.55
TPM1-224ENST00000560615 CHRNA5P30532 468 aa24.76■■□□□ 1.55
TPM1-224ENST00000560615 PRKAR2BP31323 418 aa24.76■■□□□ 1.55
TPM1-224ENST00000560615 C9orf131Q5VYM1 1079 aa24.76■■□□□ 1.55
TPM1-224ENST00000560615 RTF1Q92541 710 aaKnown RBP24.76■■□□□ 1.55
TPM1-224ENST00000560615 HEG1Q9ULI3 1381 aa24.76■■□□□ 1.55
TPM1-224ENST00000560615 ADAMTS7Q9UKP4 1686 aa24.75■■□□□ 1.55
TPM1-224ENST00000560615 KIAA1551Q9HCM1 1747 aa24.75■■□□□ 1.55
TPM1-224ENST00000560615 ZNF496Q96IT1 587 aaPredicted RBP24.75■■□□□ 1.55
TPM1-224ENST00000560615 TOMM70O94826 608 aa24.74■■□□□ 1.55
TPM1-224ENST00000560615 EIF5P55010 431 aaKnown RBP24.74■■□□□ 1.55
TPM1-224ENST00000560615 BTBD11A6QL63 1104 aa24.73■■□□□ 1.55
TPM1-224ENST00000560615 U2AF1L5P0DN76 240 aaPredicted RBP24.73■■□□□ 1.55
TPM1-224ENST00000560615 U2AF1Q01081 240 aaKnown RBP eCLIP24.73■■□□□ 1.556e-9■■■■□ 21.7
TPM1-224ENST00000560615 PDZRN3Q9UPQ7 1066 aa24.73■■□□□ 1.55
TPM1-224ENST00000560615 KDM2BQ8NHM5 1336 aa24.72■■□□□ 1.55
TPM1-224ENST00000560615 IL6STP40189 918 aaPredicted RBP24.72■■□□□ 1.55
TPM1-224ENST00000560615 C16orf71Q8IYS4 520 aaPredicted RBP24.72■■□□□ 1.55
TPM1-224ENST00000560615 RSPH6AQ9H0K4 717 aa24.72■■□□□ 1.55
TPM1-224ENST00000560615 ZNF330Q9Y3S2 320 aaPredicted RBP24.72■■□□□ 1.55
TPM1-224ENST00000560615 H0YIN7 160 aa24.71■■□□□ 1.55
TPM1-224ENST00000560615 NEFMP07197 916 aa24.71■■□□□ 1.55
TPM1-224ENST00000560615 BCL2L12Q9HB09 334 aa24.71■■□□□ 1.55
TPM1-224ENST00000560615 RNF181Q9P0P0 153 aa24.71■■□□□ 1.55
TPM1-224ENST00000560615 CEMIPQ8WUJ3 1361 aa24.7■■□□□ 1.55
TPM1-224ENST00000560615 PPP2R1AP30153 589 aa24.7■■□□□ 1.54
TPM1-224ENST00000560615 BICDL1Q6ZP65 573 aa24.7■■□□□ 1.54
TPM1-224ENST00000560615 TTLL6Q8N841 843 aa24.7■■□□□ 1.54
TPM1-224ENST00000560615 PHACTR3Q96KR7 559 aa24.7■■□□□ 1.54
TPM1-224ENST00000560615 NPHP1O15259 732 aa24.68■■□□□ 1.54
TPM1-224ENST00000560615 C2CD5Q86YS7 1000 aa24.68■■□□□ 1.54
TPM1-224ENST00000560615 HTATSF1O43719 755 aaKnown RBP24.67■■□□□ 1.54
TPM1-224ENST00000560615 PDE6BP35913 854 aa24.67■■□□□ 1.54
TPM1-224ENST00000560615 APLP1P51693 650 aa24.66■■□□□ 1.54
TPM1-224ENST00000560615 TBC1D2BQ9UPU7 963 aa24.66■■□□□ 1.54
TPM1-224ENST00000560615 ZC3H4Q9UPT8 1303 aaKnown RBP24.65■■□□□ 1.54
TPM1-224ENST00000560615 UBR2Q8IWV8 1755 aa24.65■■□□□ 1.54
TPM1-224ENST00000560615 SETDB2Q96T68 719 aa24.65■■□□□ 1.54
TPM1-224ENST00000560615 NMRK2Q9NPI5 230 aa24.65■■□□□ 1.54
TPM1-224ENST00000560615 ARFGEF1Q9Y6D6 1849 aa24.65■■□□□ 1.54
TPM1-224ENST00000560615 BRCA1P38398 1863 aaKnown RBP24.64■■□□□ 1.54
TPM1-224ENST00000560615 SNRPA1P09661 255 aaKnown RBP24.64■■□□□ 1.54
TPM1-224ENST00000560615 TBC1D9BQ66K14 1250 aa24.64■■□□□ 1.54
TPM1-224ENST00000560615 BRIP1Q9BX63 1249 aa24.64■■□□□ 1.54
TPM1-224ENST00000560615 CARMIL3Q8ND23 1372 aa24.64■■□□□ 1.53
TPM1-224ENST00000560615 VIRMAQ69YN4 1812 aaKnown RBP24.63■■□□□ 1.53
TPM1-224ENST00000560615 A1BGP04217 495 aa24.63■■□□□ 1.53
TPM1-224ENST00000560615 LMNB1P20700 586 aa24.63■■□□□ 1.53
TPM1-224ENST00000560615 RBM46Q8TBY0 533 aaKnown RBP24.63■■□□□ 1.53
TPM1-224ENST00000560615 DZIP3Q86Y13 1208 aaKnown RBP24.62■■□□□ 1.53
TPM1-224ENST00000560615 ST5P78524 1137 aa24.61■■□□□ 1.53
TPM1-224ENST00000560615 ZNF622Q969S3 477 aaKnown RBP eCLIP24.61■■□□□ 1.537e-8■■□□□ 14.3
TPM1-224ENST00000560615 ZNF652Q9Y2D9 606 aa24.61■■□□□ 1.53
TPM1-224ENST00000560615 MCM10Q7L590 875 aa24.6■■□□□ 1.53
TPM1-224ENST00000560615 CNBD1Q8NA66 436 aa24.6■■□□□ 1.53
TPM1-224ENST00000560615 PNNQ9H307 717 aaKnown RBP24.6■■□□□ 1.53
TPM1-224ENST00000560615 NRXN2Q9P2S2 1712 aa24.59■■□□□ 1.53
TPM1-224ENST00000560615 KCNQ3O43525 872 aa24.59■■□□□ 1.53
TPM1-224ENST00000560615 FSTL1Q12841 308 aa24.59■■□□□ 1.53
TPM1-224ENST00000560615 CLEC4GQ6UXB4 293 aa24.59■■□□□ 1.53
TPM1-224ENST00000560615 USP16Q9Y5T5 823 aa24.59■■□□□ 1.53
TPM1-224ENST00000560615 CAMTA2O94983 1202 aa24.58■■□□□ 1.53
TPM1-224ENST00000560615 RASSF7Q02833 373 aa24.58■■□□□ 1.53
TPM1-224ENST00000560615 TAF7Q15545 349 aaPredicted RBP24.58■■□□□ 1.53
TPM1-224ENST00000560615 PRR5LQ6MZQ0 368 aa24.58■■□□□ 1.53
TPM1-224ENST00000560615 PNISRQ8TF01 805 aaKnown RBP24.57■■□□□ 1.52
TPM1-224ENST00000560615 RRAGCQ9HB90 399 aa24.57■■□□□ 1.52
TPM1-224ENST00000560615 CNKSR1Q969H4 720 aa24.56■■□□□ 1.52
TPM1-224ENST00000560615 RGL2O15211 777 aa24.55■■□□□ 1.52
TPM1-224ENST00000560615 DPY19L2Q6NUT2 758 aa24.55■■□□□ 1.52
TPM1-224ENST00000560615 AFDNP55196 1824 aaKnown RBP24.55■■□□□ 1.52
TPM1-224ENST00000560615 SIPA1L3O60292 1781 aaPredicted RBP24.54■■□□□ 1.52
TPM1-224ENST00000560615 SOGA3Q5TF21 947 aa24.54■■□□□ 1.52
TPM1-224ENST00000560615 GLTPD2A6NH11 291 aa24.53■■□□□ 1.52
TPM1-224ENST00000560615 DCTN1Q14203 1278 aa24.53■■□□□ 1.52
TPM1-224ENST00000560615 STYK1Q6J9G0 422 aa24.53■■□□□ 1.52
TPM1-224ENST00000560615 NBPF5PQ86XG9 351 aaPredicted RBP24.53■■□□□ 1.52
TPM1-224ENST00000560615 C21orf2O43822 256 aa24.52■■□□□ 1.52
TPM1-224ENST00000560615 VEGFAP15692 232 aaPredicted RBP24.52■■□□□ 1.52
TPM1-224ENST00000560615 SMC1BQ8NDV3 1235 aa24.52■■□□□ 1.52
TPM1-224ENST00000560615 SCN7AQ01118 1682 aa24.51■■□□□ 1.51
TPM1-224ENST00000560615 TPTE2Q6XPS3 522 aa24.51■■□□□ 1.51
TPM1-224ENST00000560615 CCDC24Q8N4L8 307 aa24.51■■□□□ 1.51
TPM1-224ENST00000560615 MASTLQ96GX5 879 aa24.51■■□□□ 1.51
TPM1-224ENST00000560615 PIP4K2AP48426 406 aaPredicted RBP24.5■■□□□ 1.51
TPM1-224ENST00000560615 MAPK8IP3Q9UPT6 1336 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms