RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 PHACTR3Q96KR7 559 aa24.06■■□□□ 1.44
RPL28-210ENST00000560583 SENP3-EIF4A1A0A087X0R7 540 aa24.05■■□□□ 1.44
RPL28-210ENST00000560583 GNAT3A8MTJ3 354 aa24.05■■□□□ 1.44
RPL28-210ENST00000560583 POLRMTO00411 1230 aaKnown RBP24.05■■□□□ 1.44
RPL28-210ENST00000560583 PPP2R1AP30153 589 aa24.05■■□□□ 1.44
RPL28-210ENST00000560583 TM4SF1P30408 202 aa24.05■■□□□ 1.44
RPL28-210ENST00000560583 BCS1LQ9Y276 419 aa24.05■■□□□ 1.44
RPL28-210ENST00000560583 PRKAR2BP31323 418 aa24.04■■□□□ 1.44
RPL28-210ENST00000560583 ZNF496Q96IT1 587 aaPredicted RBP24.03■■□□□ 1.44
RPL28-210ENST00000560583 CFAP53Q96M91 514 aa24.03■■□□□ 1.44
RPL28-210ENST00000560583 BCL2L12Q9HB09 334 aa24.03■■□□□ 1.44
RPL28-210ENST00000560583 HEG1Q9ULI3 1381 aa24.03■■□□□ 1.44
RPL28-210ENST00000560583 TTC5Q8N0Z6 440 aa24.02■■□□□ 1.44
RPL28-210ENST00000560583 ZNF526Q8TF50 670 aaPredicted RBP24.02■■□□□ 1.44
RPL28-210ENST00000560583 NARFQ9UHQ1 456 aa24.02■■□□□ 1.44
RPL28-210ENST00000560583 BCORQ6W2J9 1755 aa24.01■■□□□ 1.43
RPL28-210ENST00000560583 ZPR1O75312 459 aa24.01■■□□□ 1.43
RPL28-210ENST00000560583 TEFQ10587 303 aa24.01■■□□□ 1.43
RPL28-210ENST00000560583 ZNF790Q6PG37 636 aa24.01■■□□□ 1.43
RPL28-210ENST00000560583 GPBP1L1Q9HC44 474 aaPredicted RBP24.01■■□□□ 1.43
RPL28-210ENST00000560583 NFIXQ14938 502 aa24■■□□□ 1.43
RPL28-210ENST00000560583 ANKRD31Q8N7Z5 1873 aa24■■□□□ 1.43
RPL28-210ENST00000560583 FCHSD2O94868 740 aa23.99■■□□□ 1.43
RPL28-210ENST00000560583 DLG5Q8TDM6 1919 aa23.98■■□□□ 1.43
RPL28-210ENST00000560583 CANXP27824 592 aaKnown RBP23.98■■□□□ 1.43
RPL28-210ENST00000560583 CHRNA5P30532 468 aa23.98■■□□□ 1.43
RPL28-210ENST00000560583 EIF5P55010 431 aaKnown RBP23.98■■□□□ 1.43
RPL28-210ENST00000560583 SBF1O95248 1867 aa23.97■■□□□ 1.43
RPL28-210ENST00000560583 CARMIL3Q8ND23 1372 aa23.97■■□□□ 1.43
RPL28-210ENST00000560583 COL11A2P13942 1736 aaPredicted RBP23.96■■□□□ 1.43
RPL28-210ENST00000560583 KCNQ3O43525 872 aa23.96■■□□□ 1.43
RPL28-210ENST00000560583 U2AF1L5P0DN76 240 aaPredicted RBP23.96■■□□□ 1.43
RPL28-210ENST00000560583 U2AF1Q01081 240 aaKnown RBP eCLIP23.96■■□□□ 1.43
RPL28-210ENST00000560583 PIM2Q9P1W9 311 aa23.96■■□□□ 1.43
RPL28-210ENST00000560583 STARD3NLO95772 234 aa23.95■■□□□ 1.42
RPL28-210ENST00000560583 ARHGAP27Q6ZUM4 889 aa23.95■■□□□ 1.42
RPL28-210ENST00000560583 NUDCQ9Y266 331 aa23.95■■□□□ 1.42
RPL28-210ENST00000560583 FMNL2Q96PY5 1086 aa23.93■■□□□ 1.42
RPL28-210ENST00000560583 LAMB4A4D0S4 1761 aa23.93■■□□□ 1.42
RPL28-210ENST00000560583 KIF3CO14782 793 aa23.92■■□□□ 1.42
RPL28-210ENST00000560583 DALRD3Q5D0E6 543 aaKnown RBP23.92■■□□□ 1.42
RPL28-210ENST00000560583 KDM3BQ7LBC6 1761 aa23.92■■□□□ 1.42
RPL28-210ENST00000560583 BTBD11A6QL63 1104 aa23.91■■□□□ 1.42
RPL28-210ENST00000560583 SERPINB2P05120 415 aa23.91■■□□□ 1.42
RPL28-210ENST00000560583 MCM10Q7L590 875 aa23.91■■□□□ 1.42
RPL28-210ENST00000560583 CEP350Q5VT06 3117 aa23.9■■□□□ 1.42
RPL28-210ENST00000560583 TEX13AQ9BXU3 409 aaPredicted RBP23.9■■□□□ 1.42
RPL28-210ENST00000560583 A0A087WZG4 1122 aa23.89■■□□□ 1.41
RPL28-210ENST00000560583 A1BGP04217 495 aa23.89■■□□□ 1.41
RPL28-210ENST00000560583 IL6STP40189 918 aaPredicted RBP23.89■■□□□ 1.41
RPL28-210ENST00000560583 PRAMEF22A3QJZ6 481 aa23.88■■□□□ 1.41
RPL28-210ENST00000560583 DCTN1Q14203 1278 aa23.88■■□□□ 1.41
RPL28-210ENST00000560583 TBC1D9BQ66K14 1250 aa23.88■■□□□ 1.41
RPL28-210ENST00000560583 TIAM2Q8IVF5 1701 aa23.87■■□□□ 1.41
RPL28-210ENST00000560583 C9orf131Q5VYM1 1079 aa23.87■■□□□ 1.41
RPL28-210ENST00000560583 BICDL1Q6ZP65 573 aa23.87■■□□□ 1.41
RPL28-210ENST00000560583 TBC1D2BQ9UPU7 963 aa23.87■■□□□ 1.41
RPL28-210ENST00000560583 ZNF330Q9Y3S2 320 aaPredicted RBP23.87■■□□□ 1.41
RPL28-210ENST00000560583 USP16Q9Y5T5 823 aa23.86■■□□□ 1.41
RPL28-210ENST00000560583 CACNA1SQ13698 1873 aa23.85■■□□□ 1.41
RPL28-210ENST00000560583 CAMTA2O94983 1202 aa23.85■■□□□ 1.41
RPL28-210ENST00000560583 RTF1Q92541 710 aaKnown RBP23.85■■□□□ 1.41
RPL28-210ENST00000560583 TNRC6CQ9HCJ0 1690 aaKnown RBP23.85■■□□□ 1.41
RPL28-210ENST00000560583 ARFGEF2Q9Y6D5 1785 aa23.85■■□□□ 1.41
RPL28-210ENST00000560583 CCDC88AQ3V6T2 1871 aa23.85■■□□□ 1.41
RPL28-210ENST00000560583 PIP4K2AP48426 406 aaPredicted RBP23.84■■□□□ 1.41
RPL28-210ENST00000560583 HTATSF1O43719 755 aaKnown RBP23.83■■□□□ 1.41
RPL28-210ENST00000560583 NMRK2Q9NPI5 230 aa23.83■■□□□ 1.41
RPL28-210ENST00000560583 RASSF7Q02833 373 aa23.82■■□□□ 1.4
RPL28-210ENST00000560583 PRR5LQ6MZQ0 368 aa23.82■■□□□ 1.4
RPL28-210ENST00000560583 C2CD5Q86YS7 1000 aa23.82■■□□□ 1.4
RPL28-210ENST00000560583 HSPA6P17066 643 aa23.81■■□□□ 1.4
RPL28-210ENST00000560583 PRELPP51888 382 aa23.81■■□□□ 1.4
RPL28-210ENST00000560583 PLEKHF1Q96S99 279 aa23.81■■□□□ 1.4
RPL28-210ENST00000560583 RNF181Q9P0P0 153 aa23.81■■□□□ 1.4
RPL28-210ENST00000560583 FER1L6Q2WGJ9 1857 aa23.81■■□□□ 1.4
RPL28-210ENST00000560583 DZIP3Q86Y13 1208 aaKnown RBP23.8■■□□□ 1.4
RPL28-210ENST00000560583 CCDC24Q8N4L8 307 aa23.8■■□□□ 1.4
RPL28-210ENST00000560583 SNRPA1P09661 255 aaKnown RBP23.79■■□□□ 1.4
RPL28-210ENST00000560583 NBPF26B4DH59 902 aa23.78■■□□□ 1.4
RPL28-210ENST00000560583 NBPF10Q6P3W6 841 aaKnown RBP23.78■■□□□ 1.4
RPL28-210ENST00000560583 NBPF15Q8N660 670 aa23.78■■□□□ 1.4
RPL28-210ENST00000560583 TTLL6Q8N841 843 aa23.78■■□□□ 1.4
RPL28-210ENST00000560583 SLX4Q8IY92 1834 aa23.77■■□□□ 1.4
RPL28-210ENST00000560583 H0YIN7 160 aa23.77■■□□□ 1.4
RPL28-210ENST00000560583 BRIP1Q9BX63 1249 aa23.77■■□□□ 1.4
RPL28-210ENST00000560583 DICER1Q9UPY3 1922 aaKnown RBP23.76■■□□□ 1.39
RPL28-210ENST00000560583 TAF7Q15545 349 aaPredicted RBP23.76■■□□□ 1.39
RPL28-210ENST00000560583 MIS18AQ9NYP9 233 aa23.76■■□□□ 1.39
RPL28-210ENST00000560583 NFKBIEO00221 500 aa23.75■■□□□ 1.39
RPL28-210ENST00000560583 CNBD1Q8NA66 436 aa23.75■■□□□ 1.39
RPL28-210ENST00000560583 SETDB2Q96T68 719 aa23.75■■□□□ 1.39
RPL28-210ENST00000560583 TOMM70O94826 608 aa23.74■■□□□ 1.39
RPL28-210ENST00000560583 NFE2L2Q16236 605 aa23.74■■□□□ 1.39
RPL28-210ENST00000560583 NPM2Q86SE8 214 aaKnown RBP23.74■■□□□ 1.39
RPL28-210ENST00000560583 THUMPD2Q9BTF0 503 aaKnown RBP23.74■■□□□ 1.39
RPL28-210ENST00000560583 WDR90Q96KV7 1748 aa23.73■■□□□ 1.39
RPL28-210ENST00000560583 NUP98P52948 1817 aa23.73■■□□□ 1.39
RPL28-210ENST00000560583 PDE6BP35913 854 aa23.73■■□□□ 1.39
RPL28-210ENST00000560583 ZC3H4Q9UPT8 1303 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms