RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 KCNQ3O43525 872 aa21.6■■□□□ 1.05
SPG21-211ENST00000560564 NRXN2Q9P2S2 1712 aa21.6■■□□□ 1.05
SPG21-211ENST00000560564 NARFQ9UHQ1 456 aa21.59■■□□□ 1.05
SPG21-211ENST00000560564 HTATSF1O43719 755 aaKnown RBP21.58■■□□□ 1.05
SPG21-211ENST00000560564 TM4SF1P30408 202 aa21.58■■□□□ 1.05
SPG21-211ENST00000560564 EIF5P55010 431 aaKnown RBP21.58■■□□□ 1.05
SPG21-211ENST00000560564 TGFB2P61812 414 aa21.58■■□□□ 1.05
SPG21-211ENST00000560564 MCM10Q7L590 875 aa21.58■■□□□ 1.05
SPG21-211ENST00000560564 PLEKHF1Q96S99 279 aa21.58■■□□□ 1.05
SPG21-211ENST00000560564 BCL2L12Q9HB09 334 aa21.58■■□□□ 1.05
SPG21-211ENST00000560564 PARP3Q9Y6F1 533 aa21.58■■□□□ 1.05
SPG21-211ENST00000560564 SCN7AQ01118 1682 aa21.57■■□□□ 1.04
SPG21-211ENST00000560564 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
SPG21-211ENST00000560564 STARD3NLO95772 234 aa21.57■■□□□ 1.04
SPG21-211ENST00000560564 DDX10Q13206 875 aaKnown RBP21.57■■□□□ 1.04
SPG21-211ENST00000560564 DCTN1Q14203 1278 aa21.57■■□□□ 1.04
SPG21-211ENST00000560564 RALBP1Q15311 655 aa21.57■■□□□ 1.04
SPG21-211ENST00000560564 USPL1Q5W0Q7 1092 aa21.57■■□□□ 1.04
SPG21-211ENST00000560564 FMNL2Q96PY5 1086 aa21.57■■□□□ 1.04
SPG21-211ENST00000560564 POLRMTO00411 1230 aaKnown RBP21.56■■□□□ 1.04
SPG21-211ENST00000560564 WWC3Q9ULE0 1092 aa21.56■■□□□ 1.04
SPG21-211ENST00000560564 ZPR1O75312 459 aa21.55■■□□□ 1.04
SPG21-211ENST00000560564 CANXP27824 592 aaKnown RBP21.55■■□□□ 1.04
SPG21-211ENST00000560564 RTF1Q92541 710 aaKnown RBP21.55■■□□□ 1.04
SPG21-211ENST00000560564 TEX13AQ9BXU3 409 aaPredicted RBP21.55■■□□□ 1.04
SPG21-211ENST00000560564 KDM3BQ7LBC6 1761 aa21.55■■□□□ 1.04
SPG21-211ENST00000560564 ARFGEF1Q9Y6D6 1849 aa21.54■■□□□ 1.04
SPG21-211ENST00000560564 A0A0G2JLW4 131 aa21.53■■□□□ 1.04
SPG21-211ENST00000560564 DPEP1P16444 411 aa21.53■■□□□ 1.04
SPG21-211ENST00000560564 ADCY9O60503 1353 aa21.52■■□□□ 1.04
SPG21-211ENST00000560564 BCORQ6W2J9 1755 aa21.52■■□□□ 1.04
SPG21-211ENST00000560564 KCNA3P22001 575 aa21.52■■□□□ 1.04
SPG21-211ENST00000560564 NFIXQ14938 502 aa21.52■■□□□ 1.04
SPG21-211ENST00000560564 IL6STP40189 918 aaPredicted RBP21.51■■□□□ 1.03
SPG21-211ENST00000560564 LAMB4A4D0S4 1761 aa21.51■■□□□ 1.03
SPG21-211ENST00000560564 PRAMEF22A3QJZ6 481 aa21.5■■□□□ 1.03
SPG21-211ENST00000560564 A1BGP04217 495 aa21.5■■□□□ 1.03
SPG21-211ENST00000560564 NFE2L2Q16236 605 aa21.5■■□□□ 1.03
SPG21-211ENST00000560564 USP16Q9Y5T5 823 aa21.5■■□□□ 1.03
SPG21-211ENST00000560564 DLEC1Q9Y238 1755 aa21.49■■□□□ 1.03
SPG21-211ENST00000560564 TAF7Q15545 349 aaPredicted RBP21.49■■□□□ 1.03
SPG21-211ENST00000560564 MYBBP1AQ9BQG0 1328 aaKnown RBP21.49■■□□□ 1.03
SPG21-211ENST00000560564 A0A087WZG4 1122 aa21.48■■□□□ 1.03
SPG21-211ENST00000560564 SNRPA1P09661 255 aaKnown RBP21.47■■□□□ 1.03
SPG21-211ENST00000560564 ANKRD31Q8N7Z5 1873 aa21.47■■□□□ 1.03
SPG21-211ENST00000560564 ATP10DQ9P241 1426 aa21.46■■□□□ 1.03
SPG21-211ENST00000560564 NEFMP07197 916 aa21.46■■□□□ 1.03
SPG21-211ENST00000560564 BCS1LQ9Y276 419 aa21.46■■□□□ 1.03
SPG21-211ENST00000560564 CAMTA2O94983 1202 aa21.45■■□□□ 1.02
SPG21-211ENST00000560564 THUMPD2Q9BTF0 503 aaKnown RBP21.45■■□□□ 1.02
SPG21-211ENST00000560564 PNNQ9H307 717 aaKnown RBP21.45■■□□□ 1.02
SPG21-211ENST00000560564 MIS18AQ9NYP9 233 aa21.45■■□□□ 1.02
SPG21-211ENST00000560564 TBC1D2BQ9UPU7 963 aa21.45■■□□□ 1.02
SPG21-211ENST00000560564 CARMIL3Q8ND23 1372 aa21.45■■□□□ 1.02
SPG21-211ENST00000560564 SERPINB2P05120 415 aa21.44■■□□□ 1.02
SPG21-211ENST00000560564 CHRNA5P30532 468 aa21.44■■□□□ 1.02
SPG21-211ENST00000560564 PIP4K2AP48426 406 aaPredicted RBP21.44■■□□□ 1.02
SPG21-211ENST00000560564 TBC1D9BQ66K14 1250 aa21.44■■□□□ 1.02
SPG21-211ENST00000560564 MAPK8IP3Q9UPT6 1336 aa21.44■■□□□ 1.02
SPG21-211ENST00000560564 NBPF26B4DH59 902 aa21.43■■□□□ 1.02
SPG21-211ENST00000560564 NBPF10Q6P3W6 841 aaKnown RBP21.43■■□□□ 1.02
SPG21-211ENST00000560564 NBPF15Q8N660 670 aa21.43■■□□□ 1.02
SPG21-211ENST00000560564 PIM2Q9P1W9 311 aa21.43■■□□□ 1.02
SPG21-211ENST00000560564 ZNF330Q9Y3S2 320 aaPredicted RBP21.43■■□□□ 1.02
SPG21-211ENST00000560564 PRKRIP1Q9H875 184 aaPredicted RBP21.41■■□□□ 1.02
SPG21-211ENST00000560564 SBF1O95248 1867 aa21.41■■□□□ 1.02
SPG21-211ENST00000560564 COL11A2P13942 1736 aaPredicted RBP21.41■■□□□ 1.02
SPG21-211ENST00000560564 EIF4A1P60842 406 aaKnown RBP21.4■■□□□ 1.02
SPG21-211ENST00000560564 BICDL1Q6ZP65 573 aa21.4■■□□□ 1.02
SPG21-211ENST00000560564 PNISRQ8TF01 805 aaKnown RBP21.4■■□□□ 1.02
SPG21-211ENST00000560564 GIGYF1O75420 1035 aaPredicted RBP21.39■■□□□ 1.01
SPG21-211ENST00000560564 DALRD3Q5D0E6 543 aaKnown RBP21.39■■□□□ 1.01
SPG21-211ENST00000560564 DZIP3Q86Y13 1208 aaKnown RBP21.39■■□□□ 1.01
SPG21-211ENST00000560564 TMPOP42166 694 aaKnown RBP21.38■■□□□ 1.01
SPG21-211ENST00000560564 RIPK4P57078 832 aa21.37■■□□□ 1.01
SPG21-211ENST00000560564 PRR5LQ6MZQ0 368 aa21.37■■□□□ 1.01
SPG21-211ENST00000560564 C1QTNF8P60827 252 aa21.36■■□□□ 1.01
SPG21-211ENST00000560564 ARHGAP27Q6ZUM4 889 aa21.36■■□□□ 1.01
SPG21-211ENST00000560564 NPM2Q86SE8 214 aaKnown RBP21.36■■□□□ 1.01
SPG21-211ENST00000560564 RGL2O15211 777 aa21.35■■□□□ 1.01
SPG21-211ENST00000560564 CLEC4GQ6UXB4 293 aa21.35■■□□□ 1.01
SPG21-211ENST00000560564 NUP98P52948 1817 aa21.34■■□□□ 1.01
SPG21-211ENST00000560564 CCDC146Q8IYE0 955 aa21.34■■□□□ 1.01
SPG21-211ENST00000560564 SETDB2Q96T68 719 aa21.34■■□□□ 1.01
SPG21-211ENST00000560564 C2CD5Q86YS7 1000 aa21.33■■□□□ 1.01
SPG21-211ENST00000560564 BRIP1Q9BX63 1249 aa21.33■■□□□ 1.01
SPG21-211ENST00000560564 ADAMTS8Q9UP79 889 aa21.33■■□□□ 1.01
SPG21-211ENST00000560564 CEP350Q5VT06 3117 aa21.32■■□□□ 1
SPG21-211ENST00000560564 CCDC24Q8N4L8 307 aa21.32■■□□□ 1
SPG21-211ENST00000560564 GPBP1L1Q9HC44 474 aaPredicted RBP21.32■■□□□ 1
SPG21-211ENST00000560564 BABAM1Q9NWV8 329 aa21.32■■□□□ 1
SPG21-211ENST00000560564 RRP7AQ9Y3A4 280 aaKnown RBP21.32■■□□□ 1
SPG21-211ENST00000560564 ARFGEF2Q9Y6D5 1785 aa21.32■■□□□ 1
SPG21-211ENST00000560564 H0YIN7 160 aa21.31■■□□□ 1
SPG21-211ENST00000560564 CNBD1Q8NA66 436 aa21.31■■□□□ 1
SPG21-211ENST00000560564 RUNDC1Q96C34 613 aa21.31■■□□□ 1
SPG21-211ENST00000560564 TSPYL4Q9UJ04 414 aa21.31■■□□□ 1
SPG21-211ENST00000560564 TRIM35Q9UPQ4 493 aa21.31■■□□□ 1
SPG21-211ENST00000560564 ZNF652Q9Y2D9 606 aa21.31■■□□□ 1
SPG21-211ENST00000560564 CCDC88AQ3V6T2 1871 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms