RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 RBM46Q8TBY0 533 aaKnown RBP14.35□□□□□ -0.11
CDC42BPB-207ENST00000560492 SBF1O95248 1867 aa14.35□□□□□ -0.11
CDC42BPB-207ENST00000560492 ZPR1O75312 459 aa14.34□□□□□ -0.11
CDC42BPB-207ENST00000560492 CHRNA5P30532 468 aa14.34□□□□□ -0.11
CDC42BPB-207ENST00000560492 HTRA3P83110 453 aa14.34□□□□□ -0.11
CDC42BPB-207ENST00000560492 AEBP1Q8IUX7 1158 aa14.34□□□□□ -0.11
CDC42BPB-207ENST00000560492 USP42Q9H9J4 1324 aaKnown RBP14.34□□□□□ -0.11
CDC42BPB-207ENST00000560492 CCDC88AQ3V6T2 1871 aa14.33□□□□□ -0.11
CDC42BPB-207ENST00000560492 SULT6B1Q6IMI4 303 aa14.33□□□□□ -0.12
CDC42BPB-207ENST00000560492 PANK3Q9H999 370 aa14.33□□□□□ -0.12
CDC42BPB-207ENST00000560492 RRAGCQ9HB90 399 aa14.33□□□□□ -0.12
CDC42BPB-207ENST00000560492 AFDNP55196 1824 aaKnown RBP14.32□□□□□ -0.12
CDC42BPB-207ENST00000560492 KCNA3P22001 575 aa14.32□□□□□ -0.12
CDC42BPB-207ENST00000560492 DDR1Q08345 913 aa14.32□□□□□ -0.12
CDC42BPB-207ENST00000560492 TRIM26Q12899 539 aaPredicted RBP14.32□□□□□ -0.12
CDC42BPB-207ENST00000560492 FSTL1Q12841 308 aa14.31□□□□□ -0.12
CDC42BPB-207ENST00000560492 DNAJC5GQ8N7S2 189 aa14.31□□□□□ -0.12
CDC42BPB-207ENST00000560492 EIF4G2P78344 907 aaKnown RBP eCLIP14.3□□□□□ -0.12
CDC42BPB-207ENST00000560492 RASSF7Q02833 373 aa14.3□□□□□ -0.12
CDC42BPB-207ENST00000560492 USPL1Q5W0Q7 1092 aa14.3□□□□□ -0.12
CDC42BPB-207ENST00000560492 KLRG1Q96E93 195 aa14.3□□□□□ -0.12
CDC42BPB-207ENST00000560492 PCGF6Q9BYE7 350 aa14.3□□□□□ -0.12
CDC42BPB-207ENST00000560492 TIAM2Q8IVF5 1701 aa14.29□□□□□ -0.12
CDC42BPB-207ENST00000560492 POLRMTO00411 1230 aaKnown RBP14.29□□□□□ -0.12
CDC42BPB-207ENST00000560492 DNAJC10Q8IXB1 793 aa14.29□□□□□ -0.12
CDC42BPB-207ENST00000560492 HSPA5P11021 654 aaKnown RBP14.28□□□□□ -0.12
CDC42BPB-207ENST00000560492 INTS5Q6P9B9 1019 aaKnown RBP14.28□□□□□ -0.12
CDC42BPB-207ENST00000560492 SMC1BQ8NDV3 1235 aa14.28□□□□□ -0.12
CDC42BPB-207ENST00000560492 TIMELESSQ9UNS1 1208 aa14.28□□□□□ -0.12
CDC42BPB-207ENST00000560492 KNSTRNQ9Y448 316 aa14.28□□□□□ -0.12
CDC42BPB-207ENST00000560492 DLEC1Q9Y238 1755 aa14.27□□□□□ -0.12
CDC42BPB-207ENST00000560492 AKAP4Q5JQC9 854 aa14.27□□□□□ -0.13
CDC42BPB-207ENST00000560492 ADAMTS7Q9UKP4 1686 aa14.26□□□□□ -0.13
CDC42BPB-207ENST00000560492 COL15A1P39059 1388 aa14.26□□□□□ -0.13
CDC42BPB-207ENST00000560492 SLC39A6Q13433 755 aa14.26□□□□□ -0.13
CDC42BPB-207ENST00000560492 MKRN4PQ13434 485 aaPredicted RBP14.26□□□□□ -0.13
CDC42BPB-207ENST00000560492 BICDL1Q6ZP65 573 aa14.26□□□□□ -0.13
CDC42BPB-207ENST00000560492 SLC52A2Q9HAB3 445 aa14.26□□□□□ -0.13
CDC42BPB-207ENST00000560492 CACNA1SQ13698 1873 aa14.26□□□□□ -0.13
CDC42BPB-207ENST00000560492 SOS1Q07889 1333 aaPredicted RBP14.25□□□□□ -0.13
CDC42BPB-207ENST00000560492 HMOX1P09601 288 aa14.25□□□□□ -0.13
CDC42BPB-207ENST00000560492 LMNB1P20700 586 aa14.25□□□□□ -0.13
CDC42BPB-207ENST00000560492 TM4SF1P30408 202 aa14.25□□□□□ -0.13
CDC42BPB-207ENST00000560492 LGR6Q9HBX8 967 aa14.25□□□□□ -0.13
CDC42BPB-207ENST00000560492 ZNF330Q9Y3S2 320 aaPredicted RBP14.25□□□□□ -0.13
CDC42BPB-207ENST00000560492 PITPNM1O00562 1244 aa14.24□□□□□ -0.13
CDC42BPB-207ENST00000560492 NPHP1O15259 732 aa14.24□□□□□ -0.13
CDC42BPB-207ENST00000560492 SERPINB2P05120 415 aa14.24□□□□□ -0.13
CDC42BPB-207ENST00000560492 CANXP27824 592 aaKnown RBP14.24□□□□□ -0.13
CDC42BPB-207ENST00000560492 NFIXQ14938 502 aa14.24□□□□□ -0.13
CDC42BPB-207ENST00000560492 COL13A1Q5TAT6 717 aaPredicted RBP14.24□□□□□ -0.13
CDC42BPB-207ENST00000560492 C2CD5Q86YS7 1000 aa14.24□□□□□ -0.13
CDC42BPB-207ENST00000560492 TNS4Q8IZW8 715 aa14.24□□□□□ -0.13
CDC42BPB-207ENST00000560492 TTLL6Q8N841 843 aa14.24□□□□□ -0.13
CDC42BPB-207ENST00000560492 NARFQ9UHQ1 456 aa14.24□□□□□ -0.13
CDC42BPB-207ENST00000560492 ZBTB1Q9Y2K1 713 aa14.24□□□□□ -0.13
CDC42BPB-207ENST00000560492 H0YIN7 160 aa14.23□□□□□ -0.13
CDC42BPB-207ENST00000560492 RNMTO43148 476 aaKnown RBP14.23□□□□□ -0.13
CDC42BPB-207ENST00000560492 CYP19A1P11511 503 aaPredicted RBP14.23□□□□□ -0.13
CDC42BPB-207ENST00000560492 VEGFAP15692 232 aaPredicted RBP14.23□□□□□ -0.13
CDC42BPB-207ENST00000560492 IL13P35225 146 aa14.23□□□□□ -0.13
CDC42BPB-207ENST00000560492 TTC5Q8N0Z6 440 aa14.23□□□□□ -0.13
CDC42BPB-207ENST00000560492 NRXN2Q9P2S2 1712 aa14.23□□□□□ -0.13
CDC42BPB-207ENST00000560492 ZC3H4Q9UPT8 1303 aaKnown RBP14.22□□□□□ -0.13
CDC42BPB-207ENST00000560492 CNGB1Q14028 1251 aaPredicted RBP14.22□□□□□ -0.13
CDC42BPB-207ENST00000560492 NPM2Q86SE8 214 aaKnown RBP14.22□□□□□ -0.13
CDC42BPB-207ENST00000560492 JMYQ8N9B5 988 aa14.22□□□□□ -0.13
CDC42BPB-207ENST00000560492 ZNF622Q969S3 477 aaKnown RBP eCLIP14.22□□□□□ -0.13
CDC42BPB-207ENST00000560492 MRC1P22897 1456 aa14.21□□□□□ -0.13
CDC42BPB-207ENST00000560492 GLTPD2A6NH11 291 aa14.21□□□□□ -0.13
CDC42BPB-207ENST00000560492 UBR2Q8IWV8 1755 aa14.2□□□□□ -0.14
CDC42BPB-207ENST00000560492 DICER1Q9UPY3 1922 aaKnown RBP14.2□□□□□ -0.14
CDC42BPB-207ENST00000560492 DPY19L2Q6NUT2 758 aa14.2□□□□□ -0.14
CDC42BPB-207ENST00000560492 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
CDC42BPB-207ENST00000560492 CARMIL3Q8ND23 1372 aa14.2□□□□□ -0.14
CDC42BPB-207ENST00000560492 ANKRD31Q8N7Z5 1873 aa14.19□□□□□ -0.14
CDC42BPB-207ENST00000560492 STARD3NLO95772 234 aa14.19□□□□□ -0.14
CDC42BPB-207ENST00000560492 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
CDC42BPB-207ENST00000560492 CLSPNQ9HAW4 1339 aa14.18□□□□□ -0.14
CDC42BPB-207ENST00000560492 SCN7AQ01118 1682 aa14.18□□□□□ -0.14
CDC42BPB-207ENST00000560492 A0A087WZG4 1122 aa14.18□□□□□ -0.14
CDC42BPB-207ENST00000560492 SPDYE2BA6NHP3 402 aa14.18□□□□□ -0.14
CDC42BPB-207ENST00000560492 SPDYE6P0CI01 402 aa14.18□□□□□ -0.14
CDC42BPB-207ENST00000560492 HSPA1AP0DMV8 641 aaKnown RBP14.18□□□□□ -0.14
CDC42BPB-207ENST00000560492 HSPA1BP0DMV9 641 aaKnown RBP14.18□□□□□ -0.14
CDC42BPB-207ENST00000560492 TEFQ10587 303 aa14.18□□□□□ -0.14
CDC42BPB-207ENST00000560492 MTHFSDQ2M296 383 aaKnown RBP14.18□□□□□ -0.14
CDC42BPB-207ENST00000560492 SPDYE2Q495Y8 402 aa14.18□□□□□ -0.14
CDC42BPB-207ENST00000560492 CCDC24Q8N4L8 307 aa14.18□□□□□ -0.14
CDC42BPB-207ENST00000560492 COL11A2P13942 1736 aaPredicted RBP14.18□□□□□ -0.14
CDC42BPB-207ENST00000560492 C21orf2O43822 256 aa14.17□□□□□ -0.14
CDC42BPB-207ENST00000560492 DIAPH1O60610 1272 aaKnown RBP14.17□□□□□ -0.14
CDC42BPB-207ENST00000560492 ERFEQ4G0M1 354 aa14.17□□□□□ -0.14
CDC42BPB-207ENST00000560492 VSIG10Q8N0Z9 540 aa14.17□□□□□ -0.14
CDC42BPB-207ENST00000560492 BCL2L12Q9HB09 334 aa14.17□□□□□ -0.14
CDC42BPB-207ENST00000560492 PCNTO95613 3336 aa14.17□□□□□ -0.14
CDC42BPB-207ENST00000560492 FER1L6Q2WGJ9 1857 aa14.16□□□□□ -0.14
CDC42BPB-207ENST00000560492 NFKBIEO00221 500 aa14.16□□□□□ -0.14
CDC42BPB-207ENST00000560492 U2SURPO15042 1029 aaKnown RBP14.16□□□□□ -0.14
CDC42BPB-207ENST00000560492 PDE6BP35913 854 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms