RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 EXOC5O00471 708 aa13.63□□□□□ -0.23
SNRPA1-211ENST00000560433 NBPF7P0C2Y1 421 aaPredicted RBP13.63□□□□□ -0.23
SNRPA1-211ENST00000560433 NKX1-1Q15270 411 aaPredicted RBP13.63□□□□□ -0.23
SNRPA1-211ENST00000560433 SRCIN1Q9C0H9 1055 aa13.63□□□□□ -0.23
SNRPA1-211ENST00000560433 ASAP1Q9ULH1 1129 aa13.63□□□□□ -0.23
SNRPA1-211ENST00000560433 LRRFIP2Q9Y608 721 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-211ENST00000560433 ERVV-2B6SEH9 535 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 NUCB1Q02818 461 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 FAM161AQ3B820 660 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 BEND3Q5T5X7 828 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 COPS6Q7L5N1 327 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 CHD1LQ86WJ1 897 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 ANKRD44Q8N8A2 993 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 DDX21Q9NR30 783 aaKnown RBP eCLIP13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 PNMA6EA0A0J9YXQ4 647 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 SMARCA5O60264 1052 aaPredicted RBP13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 XAGE3Q8WTP9 111 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 PIGBQ92521 554 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 TMOD3Q9NYL9 352 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 MRC1P22897 1456 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 PLCH1Q4KWH8 1693 aa13.62□□□□□ -0.23
SNRPA1-211ENST00000560433 SEC24BO95487 1268 aa13.61□□□□□ -0.23
SNRPA1-211ENST00000560433 GNAI2P04899 355 aa13.61□□□□□ -0.23
SNRPA1-211ENST00000560433 C16orf71Q8IYS4 520 aaPredicted RBP13.61□□□□□ -0.23
SNRPA1-211ENST00000560433 NGLY1Q96IV0 654 aa13.61□□□□□ -0.23
SNRPA1-211ENST00000560433 A1BGP04217 495 aa13.61□□□□□ -0.23
SNRPA1-211ENST00000560433 ACSBG1Q96GR2 724 aa13.61□□□□□ -0.23
SNRPA1-211ENST00000560433 HYPKQ9NX55 129 aa13.61□□□□□ -0.23
SNRPA1-211ENST00000560433 SPATA31A1Q5TZJ5 1347 aa13.6□□□□□ -0.23
SNRPA1-211ENST00000560433 KSR2Q6VAB6 950 aa13.6□□□□□ -0.23
SNRPA1-211ENST00000560433 RIC3Q7Z5B4 369 aa13.6□□□□□ -0.23
SNRPA1-211ENST00000560433 GCC1Q96CN9 775 aa13.6□□□□□ -0.23
SNRPA1-211ENST00000560433 ZNF330Q9Y3S2 320 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-211ENST00000560433 TOGARAM1Q9Y4F4 1720 aa13.6□□□□□ -0.23
SNRPA1-211ENST00000560433 UBTFL1P0CB47 393 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-211ENST00000560433 RPAP2Q8IXW5 612 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-211ENST00000560433 JARID2Q92833 1246 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-211ENST00000560433 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-211ENST00000560433 EXOC6BQ9Y2D4 811 aa13.6□□□□□ -0.23
SNRPA1-211ENST00000560433 ILDR1Q86SU0 546 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-211ENST00000560433 DCTPP1Q9H773 170 aa13.59□□□□□ -0.23
SNRPA1-211ENST00000560433 DISP2A7MBM2 1401 aa13.59□□□□□ -0.23
SNRPA1-211ENST00000560433 GNAI3P08754 354 aa13.59□□□□□ -0.23
SNRPA1-211ENST00000560433 OTUD7AQ8TE49 926 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-211ENST00000560433 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
SNRPA1-211ENST00000560433 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-211ENST00000560433 DDB1Q16531 1140 aa13.58□□□□□ -0.24
SNRPA1-211ENST00000560433 FAM98CQ17RN3 349 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-211ENST00000560433 NBPF14Q5TI25 921 aa13.58□□□□□ -0.24
SNRPA1-211ENST00000560433 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-211ENST00000560433 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
SNRPA1-211ENST00000560433 LRP10Q7Z4F1 713 aa13.58□□□□□ -0.24
SNRPA1-211ENST00000560433 CHMP4AQ9BY43 222 aa13.58□□□□□ -0.24
SNRPA1-211ENST00000560433 PLEKHG2Q9H7P9 1386 aa13.57□□□□□ -0.24
SNRPA1-211ENST00000560433 MSH5O43196 834 aa13.57□□□□□ -0.24
SNRPA1-211ENST00000560433 MYT1Q01538 1121 aa13.57□□□□□ -0.24
SNRPA1-211ENST00000560433 MYD88Q99836 296 aa13.57□□□□□ -0.24
SNRPA1-211ENST00000560433 ATG3Q9NT62 314 aa13.57□□□□□ -0.24
SNRPA1-211ENST00000560433 C9orf78Q9NZ63 289 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-211ENST00000560433 ATP5J2-PTCD1G3V325 749 aa13.56□□□□□ -0.24
SNRPA1-211ENST00000560433 SPATA31A5Q5VU36 1347 aa13.56□□□□□ -0.24
SNRPA1-211ENST00000560433 SPATA31A7Q8IWB4 1347 aa13.56□□□□□ -0.24
SNRPA1-211ENST00000560433 GLI3P10071 1580 aa13.56□□□□□ -0.24
SNRPA1-211ENST00000560433 DDX58O95786 925 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-211ENST00000560433 IGKV5-2P06315 115 aa13.56□□□□□ -0.24
SNRPA1-211ENST00000560433 HSPA1LP34931 641 aa13.56□□□□□ -0.24
SNRPA1-211ENST00000560433 ANKRD13DQ6ZTN6 518 aa13.56□□□□□ -0.24
SNRPA1-211ENST00000560433 ARXQ96QS3 562 aa13.56□□□□□ -0.24
SNRPA1-211ENST00000560433 RTL5Q5HYW3 569 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-211ENST00000560433 TTLL7Q6ZT98 887 aa13.55□□□□□ -0.24
SNRPA1-211ENST00000560433 PPP1R42Q7Z4L9 355 aa13.55□□□□□ -0.24
SNRPA1-211ENST00000560433 DNAJC10Q8IXB1 793 aa13.55□□□□□ -0.24
SNRPA1-211ENST00000560433 MARCH10Q8NA82 808 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-211ENST00000560433 KCPQ6ZWJ8 1503 aa13.55□□□□□ -0.24
SNRPA1-211ENST00000560433 NRAPQ86VF7 1730 aa13.55□□□□□ -0.24
SNRPA1-211ENST00000560433 EP400Q96L91 3159 aa13.55□□□□□ -0.24
SNRPA1-211ENST00000560433 ATP8B2P98198 1209 aa13.55□□□□□ -0.24
SNRPA1-211ENST00000560433 FAM182BQ5T319 152 aa13.55□□□□□ -0.24
SNRPA1-211ENST00000560433 UNC5CLQ8IV45 518 aa13.55□□□□□ -0.24
SNRPA1-211ENST00000560433 PXDNLA1KZ92 1463 aa13.55□□□□□ -0.24
SNRPA1-211ENST00000560433 JCADQ9P266 1359 aa13.54□□□□□ -0.24
SNRPA1-211ENST00000560433 SLIT2O94813 1529 aa13.54□□□□□ -0.24
SNRPA1-211ENST00000560433 ITGB4P16144 1822 aa13.54□□□□□ -0.24
SNRPA1-211ENST00000560433 SRGAP3O43295 1099 aa13.54□□□□□ -0.24
SNRPA1-211ENST00000560433 HMMRO75330 724 aa13.54□□□□□ -0.24
SNRPA1-211ENST00000560433 TSHZ3Q63HK5 1081 aa13.54□□□□□ -0.24
SNRPA1-211ENST00000560433 SLC4A9Q96Q91 983 aa13.54□□□□□ -0.24
SNRPA1-211ENST00000560433 ZBTB3Q9H5J0 574 aa13.54□□□□□ -0.24
SNRPA1-211ENST00000560433 ANP32AP39687 249 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-211ENST00000560433 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-211ENST00000560433 KCNQ2O43526 872 aa13.53□□□□□ -0.24
SNRPA1-211ENST00000560433 LINS1Q8NG48 757 aa13.53□□□□□ -0.24
SNRPA1-211ENST00000560433 LRP6O75581 1613 aa13.53□□□□□ -0.24
SNRPA1-211ENST00000560433 BCL9LQ86UU0 1499 aa13.53□□□□□ -0.24
SNRPA1-211ENST00000560433 SUCLG2Q96I99 432 aa13.52□□□□□ -0.24
SNRPA1-211ENST00000560433 USP21Q9UK80 565 aa13.52□□□□□ -0.24
SNRPA1-211ENST00000560433 UBR2Q8IWV8 1755 aa13.52□□□□□ -0.25
SNRPA1-211ENST00000560433 TNS2Q63HR2 1409 aa13.52□□□□□ -0.25
SNRPA1-211ENST00000560433 NEURL1BA8MQ27 555 aa13.52□□□□□ -0.25
SNRPA1-211ENST00000560433 NEXNQ0ZGT2 675 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms