RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 PRKRIP1Q9H875 184 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-210ENST00000560383 SOS1Q07889 1333 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-210ENST00000560383 TEFQ10587 303 aa20.17■□□□□ 0.82
SNRPA1-210ENST00000560383 ARFGEF1Q9Y6D6 1849 aa20.17■□□□□ 0.82
SNRPA1-210ENST00000560383 SRP68Q9UHB9 627 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-210ENST00000560383 COL15A1P39059 1388 aa20.16■□□□□ 0.82
SNRPA1-210ENST00000560383 PNNQ9H307 717 aaKnown RBP20.15■□□□□ 0.82
SNRPA1-210ENST00000560383 NRXN2Q9P2S2 1712 aa20.15■□□□□ 0.82
SNRPA1-210ENST00000560383 FKBP8Q14318 412 aa20.14■□□□□ 0.81
SNRPA1-210ENST00000560383 ZNF790Q6PG37 636 aa20.14■□□□□ 0.81
SNRPA1-210ENST00000560383 TTC5Q8N0Z6 440 aa20.14■□□□□ 0.81
SNRPA1-210ENST00000560383 ZNF316A6NFI3 1004 aaPredicted RBP20.13■□□□□ 0.81
SNRPA1-210ENST00000560383 ZPR1O75312 459 aa20.13■□□□□ 0.81
SNRPA1-210ENST00000560383 NEFMP07197 916 aa20.13■□□□□ 0.81
SNRPA1-210ENST00000560383 RTF1Q92541 710 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-210ENST00000560383 AFDNP55196 1824 aaKnown RBP20.12■□□□□ 0.81
SNRPA1-210ENST00000560383 A0A0G2JLW4 131 aa20.12■□□□□ 0.81
SNRPA1-210ENST00000560383 DDR1Q08345 913 aa20.12■□□□□ 0.81
SNRPA1-210ENST00000560383 WWC3Q9ULE0 1092 aa20.12■□□□□ 0.81
SNRPA1-210ENST00000560383 ZBTB1Q9Y2K1 713 aa20.12■□□□□ 0.81
SNRPA1-210ENST00000560383 SCN7AQ01118 1682 aa20.12■□□□□ 0.81
SNRPA1-210ENST00000560383 POLRMTO00411 1230 aaKnown RBP20.11■□□□□ 0.81
SNRPA1-210ENST00000560383 TM4SF1P30408 202 aa20.11■□□□□ 0.81
SNRPA1-210ENST00000560383 NFE2L2Q16236 605 aa20.11■□□□□ 0.81
SNRPA1-210ENST00000560383 MCM10Q7L590 875 aa20.11■□□□□ 0.81
SNRPA1-210ENST00000560383 ZNF496Q96IT1 587 aaPredicted RBP20.11■□□□□ 0.81
SNRPA1-210ENST00000560383 NARFQ9UHQ1 456 aa20.11■□□□□ 0.81
SNRPA1-210ENST00000560383 CEP350Q5VT06 3117 aa20.11■□□□□ 0.81
SNRPA1-210ENST00000560383 HEG1Q9ULI3 1381 aa20.1■□□□□ 0.81
SNRPA1-210ENST00000560383 STARD3NLO95772 234 aa20.1■□□□□ 0.81
SNRPA1-210ENST00000560383 DPEP1P16444 411 aa20.1■□□□□ 0.81
SNRPA1-210ENST00000560383 USPL1Q5W0Q7 1092 aa20.1■□□□□ 0.81
SNRPA1-210ENST00000560383 BCS1LQ9Y276 419 aa20.1■□□□□ 0.81
SNRPA1-210ENST00000560383 DLEC1Q9Y238 1755 aa20.1■□□□□ 0.81
SNRPA1-210ENST00000560383 BTBD11A6QL63 1104 aa20.09■□□□□ 0.81
SNRPA1-210ENST00000560383 DCTN1Q14203 1278 aa20.09■□□□□ 0.81
SNRPA1-210ENST00000560383 TEX13AQ9BXU3 409 aaPredicted RBP20.09■□□□□ 0.81
SNRPA1-210ENST00000560383 GPBP1L1Q9HC44 474 aaPredicted RBP20.09■□□□□ 0.81
SNRPA1-210ENST00000560383 MAPK8IP3Q9UPT6 1336 aa20.08■□□□□ 0.81
SNRPA1-210ENST00000560383 KCNA3P22001 575 aa20.08■□□□□ 0.81
SNRPA1-210ENST00000560383 SENP3-EIF4A1A0A087X0R7 540 aa20.07■□□□□ 0.8
SNRPA1-210ENST00000560383 FMNL2Q96PY5 1086 aa20.07■□□□□ 0.8
SNRPA1-210ENST00000560383 PIM2Q9P1W9 311 aa20.07■□□□□ 0.8
SNRPA1-210ENST00000560383 KCNQ3O43525 872 aa20.06■□□□□ 0.8
SNRPA1-210ENST00000560383 EIF5P55010 431 aaKnown RBP20.06■□□□□ 0.8
SNRPA1-210ENST00000560383 A0A087WZG4 1122 aa20.05■□□□□ 0.8
SNRPA1-210ENST00000560383 NFIXQ14938 502 aa20.05■□□□□ 0.8
SNRPA1-210ENST00000560383 TAF7Q15545 349 aaPredicted RBP20.05■□□□□ 0.8
SNRPA1-210ENST00000560383 BCL2L12Q9HB09 334 aa20.05■□□□□ 0.8
SNRPA1-210ENST00000560383 BCORQ6W2J9 1755 aa20.05■□□□□ 0.8
SNRPA1-210ENST00000560383 CANXP27824 592 aaKnown RBP20.04■□□□□ 0.8
SNRPA1-210ENST00000560383 WDR43Q15061 677 aaKnown RBP eCLIP20.03■□□□□ 0.8
SNRPA1-210ENST00000560383 DALRD3Q5D0E6 543 aaKnown RBP20.03■□□□□ 0.8
SNRPA1-210ENST00000560383 ADAMTS8Q9UP79 889 aa20.03■□□□□ 0.8
SNRPA1-210ENST00000560383 IL6STP40189 918 aaPredicted RBP20.02■□□□□ 0.8
SNRPA1-210ENST00000560383 ARHGAP27Q6ZUM4 889 aa20.02■□□□□ 0.8
SNRPA1-210ENST00000560383 TMPOP42166 694 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-210ENST00000560383 PNISRQ8TF01 805 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-210ENST00000560383 ZNF526Q8TF50 670 aaPredicted RBP20.01■□□□□ 0.79
SNRPA1-210ENST00000560383 DLG5Q8TDM6 1919 aa20.01■□□□□ 0.79
SNRPA1-210ENST00000560383 SERPINB2P05120 415 aa20■□□□□ 0.79
SNRPA1-210ENST00000560383 RIPK4P57078 832 aa20■□□□□ 0.79
SNRPA1-210ENST00000560383 RUNDC1Q96C34 613 aa20■□□□□ 0.79
SNRPA1-210ENST00000560383 LAMB4A4D0S4 1761 aa20■□□□□ 0.79
SNRPA1-210ENST00000560383 SBF1O95248 1867 aa19.99■□□□□ 0.79
SNRPA1-210ENST00000560383 ANKRD31Q8N7Z5 1873 aa19.99■□□□□ 0.79
SNRPA1-210ENST00000560383 SNRPA1P09661 255 aaKnown RBP19.99■□□□□ 0.79
SNRPA1-210ENST00000560383 CHRNA5P30532 468 aa19.99■□□□□ 0.79
SNRPA1-210ENST00000560383 THUMPD2Q9BTF0 503 aaKnown RBP19.99■□□□□ 0.79
SNRPA1-210ENST00000560383 LMOD3Q0VAK6 560 aa19.98■□□□□ 0.79
SNRPA1-210ENST00000560383 CCDC146Q8IYE0 955 aa19.98■□□□□ 0.79
SNRPA1-210ENST00000560383 USP16Q9Y5T5 823 aa19.98■□□□□ 0.79
SNRPA1-210ENST00000560383 CARMIL3Q8ND23 1372 aa19.97■□□□□ 0.79
SNRPA1-210ENST00000560383 MIS18AQ9NYP9 233 aa19.97■□□□□ 0.79
SNRPA1-210ENST00000560383 KDM3BQ7LBC6 1761 aa19.97■□□□□ 0.79
SNRPA1-210ENST00000560383 KIF3CO14782 793 aa19.96■□□□□ 0.79
SNRPA1-210ENST00000560383 A1BGP04217 495 aa19.96■□□□□ 0.79
SNRPA1-210ENST00000560383 NPM2Q86SE8 214 aaKnown RBP19.96■□□□□ 0.79
SNRPA1-210ENST00000560383 BABAM1Q9NWV8 329 aa19.96■□□□□ 0.79
SNRPA1-210ENST00000560383 COL11A2P13942 1736 aaPredicted RBP19.96■□□□□ 0.79
SNRPA1-210ENST00000560383 PRAMEF22A3QJZ6 481 aa19.95■□□□□ 0.78
SNRPA1-210ENST00000560383 TBC1D9BQ66K14 1250 aa19.95■□□□□ 0.78
SNRPA1-210ENST00000560383 PDZRN3Q9UPQ7 1066 aa19.95■□□□□ 0.78
SNRPA1-210ENST00000560383 TNRC6CQ9HCJ0 1690 aaKnown RBP19.94■□□□□ 0.78
SNRPA1-210ENST00000560383 CAMTA2O94983 1202 aa19.94■□□□□ 0.78
SNRPA1-210ENST00000560383 EIF4A1P60842 406 aaKnown RBP19.94■□□□□ 0.78
SNRPA1-210ENST00000560383 C9orf131Q5VYM1 1079 aa19.94■□□□□ 0.78
SNRPA1-210ENST00000560383 TRIM35Q9UPQ4 493 aa19.94■□□□□ 0.78
SNRPA1-210ENST00000560383 TBC1D2BQ9UPU7 963 aa19.94■□□□□ 0.78
SNRPA1-210ENST00000560383 RRP7AQ9Y3A4 280 aaKnown RBP19.94■□□□□ 0.78
SNRPA1-210ENST00000560383 ZNF330Q9Y3S2 320 aaPredicted RBP19.94■□□□□ 0.78
SNRPA1-210ENST00000560383 CCDC184Q52MB2 194 aa19.93■□□□□ 0.78
SNRPA1-210ENST00000560383 ZC3H4Q9UPT8 1303 aaKnown RBP19.93■□□□□ 0.78
SNRPA1-210ENST00000560383 H0YIN7 160 aa19.92■□□□□ 0.78
SNRPA1-210ENST00000560383 RGL2O15211 777 aa19.92■□□□□ 0.78
SNRPA1-210ENST00000560383 ANP32CO43423 234 aa19.92■□□□□ 0.78
SNRPA1-210ENST00000560383 BICDL1Q6ZP65 573 aa19.92■□□□□ 0.78
SNRPA1-210ENST00000560383 DZIP3Q86Y13 1208 aaKnown RBP19.92■□□□□ 0.78
SNRPA1-210ENST00000560383 TTLL6Q8N841 843 aa19.92■□□□□ 0.78
SNRPA1-210ENST00000560383 BRIP1Q9BX63 1249 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms