RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ZNF771Q7L3S4 317 aaPredicted RBP15.77■□□□□ 0.11
TRAF3-208ENST00000560371 TXLNBQ8N3L3 684 aa15.77■□□□□ 0.11
TRAF3-208ENST00000560371 NKTRP30414 1462 aaKnown RBP15.77■□□□□ 0.11
TRAF3-208ENST00000560371 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
TRAF3-208ENST00000560371 CCDC184Q52MB2 194 aa15.76■□□□□ 0.11
TRAF3-208ENST00000560371 FLIIQ13045 1269 aa15.76■□□□□ 0.11
TRAF3-208ENST00000560371 C14orf93Q9H972 538 aaKnown RBP15.76■□□□□ 0.11
TRAF3-208ENST00000560371 FEZ1Q99689 392 aa15.76■□□□□ 0.11
TRAF3-208ENST00000560371 ST5P78524 1137 aa15.76■□□□□ 0.11
TRAF3-208ENST00000560371 UBE3BQ7Z3V4 1068 aa15.76■□□□□ 0.11
TRAF3-208ENST00000560371 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
TRAF3-208ENST00000560371 RNF41Q9H4P4 317 aaPredicted RBP15.75■□□□□ 0.11
TRAF3-208ENST00000560371 SMARCA5O60264 1052 aaPredicted RBP15.75■□□□□ 0.11
TRAF3-208ENST00000560371 DHX8Q14562 1220 aaKnown RBP15.75■□□□□ 0.11
TRAF3-208ENST00000560371 MYCNP04198 464 aaPredicted RBP15.75■□□□□ 0.11
TRAF3-208ENST00000560371 SNRPA1P09661 255 aaKnown RBP15.75■□□□□ 0.11
TRAF3-208ENST00000560371 RARSP54136 660 aaKnown RBP15.75■□□□□ 0.11
TRAF3-208ENST00000560371 ERCC4Q92889 916 aaPredicted RBP15.75■□□□□ 0.11
TRAF3-208ENST00000560371 C8orf37Q96NL8 207 aa15.75■□□□□ 0.11
TRAF3-208ENST00000560371 UHRF1BP1LA0JNW5 1464 aa15.75■□□□□ 0.11
TRAF3-208ENST00000560371 ATP5J2-PTCD1G3V325 749 aa15.75■□□□□ 0.11
TRAF3-208ENST00000560371 ERLIN2O94905 339 aa15.75■□□□□ 0.11
TRAF3-208ENST00000560371 BAG3O95817 575 aa15.75■□□□□ 0.11
TRAF3-208ENST00000560371 SEPT11Q9NVA2 429 aaKnown RBP15.75■□□□□ 0.11
TRAF3-208ENST00000560371 PPP1R12BO60237 982 aaPredicted RBP15.74■□□□□ 0.11
TRAF3-208ENST00000560371 NBPF6Q5VWK0 638 aa15.74■□□□□ 0.11
TRAF3-208ENST00000560371 NBPF5PQ86XG9 351 aaPredicted RBP15.74■□□□□ 0.11
TRAF3-208ENST00000560371 NBPF4Q96M43 638 aa15.74■□□□□ 0.11
TRAF3-208ENST00000560371 NSD2O96028 1365 aa15.74■□□□□ 0.11
TRAF3-208ENST00000560371 NEFHP12036 1026 aa15.74■□□□□ 0.11
TRAF3-208ENST00000560371 SCLT1Q96NL6 688 aa15.74■□□□□ 0.11
TRAF3-208ENST00000560371 PPP4R3AQ6IN85 833 aa15.74■□□□□ 0.11
TRAF3-208ENST00000560371 CCDC82Q8N4S0 544 aa15.74■□□□□ 0.11
TRAF3-208ENST00000560371 CUL5Q93034 780 aa15.74■□□□□ 0.11
TRAF3-208ENST00000560371 HMGB1P09429 215 aaKnown RBP15.74■□□□□ 0.11
TRAF3-208ENST00000560371 ZCRB1Q8TBF4 217 aaKnown RBP15.74■□□□□ 0.11
TRAF3-208ENST00000560371 MAP3K1Q13233 1512 aa15.74■□□□□ 0.11
TRAF3-208ENST00000560371 ASXL2Q76L83 1435 aa15.73■□□□□ 0.11
TRAF3-208ENST00000560371 LDHCP07864 332 aa15.73■□□□□ 0.11
TRAF3-208ENST00000560371 RAB34Q9BZG1 259 aa15.73■□□□□ 0.11
TRAF3-208ENST00000560371 SLC12A7Q9Y666 1083 aa15.73■□□□□ 0.11
TRAF3-208ENST00000560371 SKIDA1Q1XH10 827 aa15.73■□□□□ 0.11
TRAF3-208ENST00000560371 TTF1Q15361 905 aaPredicted RBP15.72■□□□□ 0.11
TRAF3-208ENST00000560371 SETDB2Q96T68 719 aa15.72■□□□□ 0.11
TRAF3-208ENST00000560371 MYO1BO43795 1136 aa15.72■□□□□ 0.11
TRAF3-208ENST00000560371 PI4KAP2A4QPH2 592 aa15.72■□□□□ 0.11
TRAF3-208ENST00000560371 CATIPQ7Z7H3 387 aa15.72■□□□□ 0.11
TRAF3-208ENST00000560371 PI4KAP1Q8N8J0 262 aa15.72■□□□□ 0.11
TRAF3-208ENST00000560371 BACH2Q9BYV9 841 aa15.72■□□□□ 0.11
TRAF3-208ENST00000560371 DNAI2Q9GZS0 605 aa15.72■□□□□ 0.11
TRAF3-208ENST00000560371 IFIT3O14879 490 aaKnown RBP15.72■□□□□ 0.11
TRAF3-208ENST00000560371 CBFA2T2O43439 604 aa15.71■□□□□ 0.11
TRAF3-208ENST00000560371 SPTY2D1Q68D10 685 aaPredicted RBP15.71■□□□□ 0.11
TRAF3-208ENST00000560371 PRPF40BQ6NWY9 871 aaKnown RBP15.71■□□□□ 0.11
TRAF3-208ENST00000560371 CCDC181Q5TID7 509 aa15.71■□□□□ 0.11
TRAF3-208ENST00000560371 ANKRD13DQ6ZTN6 518 aa15.71■□□□□ 0.11
TRAF3-208ENST00000560371 ACSBG1Q96GR2 724 aa15.71■□□□□ 0.11
TRAF3-208ENST00000560371 C8orf76Q96K31 380 aa15.71■□□□□ 0.11
TRAF3-208ENST00000560371 TTC21AQ8NDW8 1320 aa15.71■□□□□ 0.11
TRAF3-208ENST00000560371 ATP6V1AP38606 617 aa15.7■□□□□ 0.1
TRAF3-208ENST00000560371 CCDC152Q4G0S7 254 aa15.7■□□□□ 0.1
TRAF3-208ENST00000560371 NUP62CLQ9H1M0 184 aa15.7■□□□□ 0.1
TRAF3-208ENST00000560371 A2MP01023 1474 aa15.7■□□□□ 0.1
TRAF3-208ENST00000560371 UPF3BQ9BZI7 483 aaKnown RBP15.7■□□□□ 0.1
TRAF3-208ENST00000560371 HLA-DOAP06340 250 aa15.7■□□□□ 0.1
TRAF3-208ENST00000560371 EIF5P55010 431 aaKnown RBP15.7■□□□□ 0.1
TRAF3-208ENST00000560371 DUOX2Q9NRD8 1548 aa15.7■□□□□ 0.1
TRAF3-208ENST00000560371 DDB1Q16531 1140 aa15.7■□□□□ 0.1
TRAF3-208ENST00000560371 CCDC83Q8IWF9 413 aa15.69■□□□□ 0.1
TRAF3-208ENST00000560371 GOLIM4O00461 696 aa15.69■□□□□ 0.1
TRAF3-208ENST00000560371 PDE4BQ07343 736 aa15.69■□□□□ 0.1
TRAF3-208ENST00000560371 ZNF518AQ6AHZ1 1483 aa15.69■□□□□ 0.1
TRAF3-208ENST00000560371 EHMT1Q9H9B1 1298 aa15.69■□□□□ 0.1
TRAF3-208ENST00000560371 PIK3R4Q99570 1358 aa15.69■□□□□ 0.1
TRAF3-208ENST00000560371 POTEJP0CG39 1038 aa15.69■□□□□ 0.1
TRAF3-208ENST00000560371 SEPT7Q16181 437 aaKnown RBP15.69■□□□□ 0.1
TRAF3-208ENST00000560371 PPM1FP49593 454 aaPredicted RBP15.68■□□□□ 0.1
TRAF3-208ENST00000560371 CABP5Q9NP86 173 aa15.68■□□□□ 0.1
TRAF3-208ENST00000560371 TMEM266Q2M3C6 531 aa15.68■□□□□ 0.1
TRAF3-208ENST00000560371 GPATCH8Q9UKJ3 1502 aaKnown RBP15.68■□□□□ 0.1
TRAF3-208ENST00000560371 FAM177A1Q8N128 213 aaPredicted RBP15.68■□□□□ 0.1
TRAF3-208ENST00000560371 EVI5LQ96CN4 794 aa15.68■□□□□ 0.1
TRAF3-208ENST00000560371 SMTNL1A8MU46 457 aa15.68■□□□□ 0.1
TRAF3-208ENST00000560371 NEBLO76041 1014 aa15.68■□□□□ 0.1
TRAF3-208ENST00000560371 SMARCC1Q92922 1105 aaPredicted RBP15.68■□□□□ 0.1
TRAF3-208ENST00000560371 RPRD2Q5VT52 1461 aaKnown RBP15.68■□□□□ 0.1
TRAF3-208ENST00000560371 TSPY2A6NKD2 308 aa15.68■□□□□ 0.1
TRAF3-208ENST00000560371 OGFOD1Q8N543 542 aa15.67■□□□□ 0.1
TRAF3-208ENST00000560371 FAM83GA6ND36 823 aa15.67■□□□□ 0.1
TRAF3-208ENST00000560371 ZNF397Q8NF99 534 aaPredicted RBP15.67■□□□□ 0.1
TRAF3-208ENST00000560371 NLRP3Q96P20 1036 aa15.67■□□□□ 0.1
TRAF3-208ENST00000560371 KIF5BP33176 963 aa15.67■□□□□ 0.1
TRAF3-208ENST00000560371 FERMT3Q86UX7 667 aa15.67■□□□□ 0.1
TRAF3-208ENST00000560371 CCDC97Q96F63 343 aaPredicted RBP15.67■□□□□ 0.1
TRAF3-208ENST00000560371 NLRP5P59047 1200 aa15.67■□□□□ 0.1
TRAF3-208ENST00000560371 TMEM87AQ8NBN3 555 aa15.67■□□□□ 0.1
TRAF3-208ENST00000560371 SSR1P43307 286 aaKnown RBP15.67■□□□□ 0.1
TRAF3-208ENST00000560371 MAP7D2Q96T17 732 aa15.67■□□□□ 0.1
TRAF3-208ENST00000560371 TRIM27P14373 513 aa15.66■□□□□ 0.1
TRAF3-208ENST00000560371 SSRP1Q08945 709 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms