RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 UBR2Q8IWV8 1755 aa27.54■■■□□ 2
ETFA-213ENST00000560309 HTATSF1O43719 755 aaKnown RBP27.53■■■□□ 2
ETFA-213ENST00000560309 RTF1Q92541 710 aaKnown RBP27.53■■■□□ 2
ETFA-213ENST00000560309 FMNL2Q96PY5 1086 aa27.53■■■□□ 2
ETFA-213ENST00000560309 ZBTB1Q9Y2K1 713 aa27.53■■■□□ 2
ETFA-213ENST00000560309 COL15A1P39059 1388 aa27.52■■■□□ 2
ETFA-213ENST00000560309 HEG1Q9ULI3 1381 aa27.52■■■□□ 2
ETFA-213ENST00000560309 DPEP1P16444 411 aa27.52■■■□□ 2
ETFA-213ENST00000560309 ZNF496Q96IT1 587 aaPredicted RBP27.52■■■□□ 2
ETFA-213ENST00000560309 BCS1LQ9Y276 419 aa27.52■■■□□ 2
ETFA-213ENST00000560309 PIM2Q9P1W9 311 aa27.51■■□□□ 1.99
ETFA-213ENST00000560309 BTBD11A6QL63 1104 aa27.5■■□□□ 1.99
ETFA-213ENST00000560309 POLRMTO00411 1230 aaKnown RBP27.5■■□□□ 1.99
ETFA-213ENST00000560309 NEFMP07197 916 aa27.5■■□□□ 1.99
ETFA-213ENST00000560309 DDR1Q08345 913 aa27.5■■□□□ 1.99
ETFA-213ENST00000560309 WWC3Q9ULE0 1092 aa27.5■■□□□ 1.99
ETFA-213ENST00000560309 CANXP27824 592 aaKnown RBP27.49■■□□□ 1.99
ETFA-213ENST00000560309 EIF5P55010 431 aaKnown RBP27.49■■□□□ 1.99
ETFA-213ENST00000560309 NPM2Q86SE8 214 aaKnown RBP27.49■■□□□ 1.99
ETFA-213ENST00000560309 ATP10DQ9P241 1426 aa27.49■■□□□ 1.99
ETFA-213ENST00000560309 SIPA1L3O60292 1781 aaPredicted RBP27.48■■□□□ 1.99
ETFA-213ENST00000560309 N4BP2Q86UW6 1770 aaPredicted RBP27.48■■□□□ 1.99
ETFA-213ENST00000560309 KIAA1551Q9HCM1 1747 aa27.48■■□□□ 1.99
ETFA-213ENST00000560309 GPBP1L1Q9HC44 474 aaPredicted RBP27.48■■□□□ 1.99
ETFA-213ENST00000560309 ADCY9O60503 1353 aa27.48■■□□□ 1.99
ETFA-213ENST00000560309 IL6STP40189 918 aaPredicted RBP27.47■■□□□ 1.99
ETFA-213ENST00000560309 KCNA3P22001 575 aa27.46■■□□□ 1.99
ETFA-213ENST00000560309 PNNQ9H307 717 aaKnown RBP27.46■■□□□ 1.99
ETFA-213ENST00000560309 NFIXQ14938 502 aa27.45■■□□□ 1.98
ETFA-213ENST00000560309 DALRD3Q5D0E6 543 aaKnown RBP27.45■■□□□ 1.98
ETFA-213ENST00000560309 ARHGAP27Q6ZUM4 889 aa27.44■■□□□ 1.98
ETFA-213ENST00000560309 SERPINB2P05120 415 aa27.42■■□□□ 1.98
ETFA-213ENST00000560309 BCL2L12Q9HB09 334 aa27.42■■□□□ 1.98
ETFA-213ENST00000560309 BRCA1P38398 1863 aaKnown RBP27.42■■□□□ 1.98
ETFA-213ENST00000560309 SNRPA1P09661 255 aaKnown RBP27.4■■□□□ 1.98
ETFA-213ENST00000560309 PDZRN3Q9UPQ7 1066 aa27.4■■□□□ 1.98
ETFA-213ENST00000560309 ARFGEF1Q9Y6D6 1849 aa27.39■■□□□ 1.98
ETFA-213ENST00000560309 RALBP1Q15311 655 aa27.39■■□□□ 1.98
ETFA-213ENST00000560309 TAF7Q15545 349 aaPredicted RBP27.39■■□□□ 1.98
ETFA-213ENST00000560309 MCM10Q7L590 875 aa27.39■■□□□ 1.98
ETFA-213ENST00000560309 SENP3-EIF4A1A0A087X0R7 540 aa27.37■■□□□ 1.97
ETFA-213ENST00000560309 KCNQ3O43525 872 aa27.37■■□□□ 1.97
ETFA-213ENST00000560309 PNISRQ8TF01 805 aaKnown RBP27.37■■□□□ 1.97
ETFA-213ENST00000560309 NRXN2Q9P2S2 1712 aa27.36■■□□□ 1.97
ETFA-213ENST00000560309 A1BGP04217 495 aa27.36■■□□□ 1.97
ETFA-213ENST00000560309 CHRNA5P30532 468 aa27.35■■□□□ 1.97
ETFA-213ENST00000560309 TBC1D2BQ9UPU7 963 aa27.35■■□□□ 1.97
ETFA-213ENST00000560309 ZNF330Q9Y3S2 320 aaPredicted RBP27.35■■□□□ 1.97
ETFA-213ENST00000560309 AFDNP55196 1824 aaKnown RBP27.34■■□□□ 1.97
ETFA-213ENST00000560309 USP16Q9Y5T5 823 aa27.34■■□□□ 1.97
ETFA-213ENST00000560309 H0YIN7 160 aa27.33■■□□□ 1.97
ETFA-213ENST00000560309 RGL2O15211 777 aa27.33■■□□□ 1.97
ETFA-213ENST00000560309 DCTN1Q14203 1278 aa27.32■■□□□ 1.96
ETFA-213ENST00000560309 CLEC4GQ6UXB4 293 aa27.32■■□□□ 1.96
ETFA-213ENST00000560309 BICDL1Q6ZP65 573 aa27.32■■□□□ 1.96
ETFA-213ENST00000560309 ZNF526Q8TF50 670 aaPredicted RBP27.32■■□□□ 1.96
ETFA-213ENST00000560309 PLEKHF1Q96S99 279 aa27.32■■□□□ 1.96
ETFA-213ENST00000560309 SETDB2Q96T68 719 aa27.32■■□□□ 1.96
ETFA-213ENST00000560309 PDE6BP35913 854 aa27.31■■□□□ 1.96
ETFA-213ENST00000560309 TBC1D9BQ66K14 1250 aa27.31■■□□□ 1.96
ETFA-213ENST00000560309 BRIP1Q9BX63 1249 aa27.31■■□□□ 1.96
ETFA-213ENST00000560309 CARMIL3Q8ND23 1372 aa27.31■■□□□ 1.96
ETFA-213ENST00000560309 NFE2L2Q16236 605 aa27.3■■□□□ 1.96
ETFA-213ENST00000560309 DZIP3Q86Y13 1208 aaKnown RBP27.3■■□□□ 1.96
ETFA-213ENST00000560309 TTLL6Q8N841 843 aa27.3■■□□□ 1.96
ETFA-213ENST00000560309 MAPK8IP3Q9UPT6 1336 aa27.3■■□□□ 1.96
ETFA-213ENST00000560309 CAMTA2O94983 1202 aa27.29■■□□□ 1.96
ETFA-213ENST00000560309 C9orf131Q5VYM1 1079 aa27.29■■□□□ 1.96
ETFA-213ENST00000560309 C2CD5Q86YS7 1000 aa27.29■■□□□ 1.96
ETFA-213ENST00000560309 ZNF652Q9Y2D9 606 aa27.29■■□□□ 1.96
ETFA-213ENST00000560309 SCN7AQ01118 1682 aa27.27■■□□□ 1.96
ETFA-213ENST00000560309 KIF3CO14782 793 aa27.25■■□□□ 1.95
ETFA-213ENST00000560309 PRR5LQ6MZQ0 368 aa27.25■■□□□ 1.95
ETFA-213ENST00000560309 NPHP1O15259 732 aa27.24■■□□□ 1.95
ETFA-213ENST00000560309 ST5P78524 1137 aa27.24■■□□□ 1.95
ETFA-213ENST00000560309 CNBD1Q8NA66 436 aa27.24■■□□□ 1.95
ETFA-213ENST00000560309 ZC3H4Q9UPT8 1303 aaKnown RBP27.23■■□□□ 1.95
ETFA-213ENST00000560309 DLEC1Q9Y238 1755 aa27.23■■□□□ 1.95
ETFA-213ENST00000560309 PRAMEF22A3QJZ6 481 aa27.23■■□□□ 1.95
ETFA-213ENST00000560309 DLG5Q8TDM6 1919 aa27.23■■□□□ 1.95
ETFA-213ENST00000560309 RNF181Q9P0P0 153 aa27.22■■□□□ 1.95
ETFA-213ENST00000560309 KDM2BQ8NHM5 1336 aa27.21■■□□□ 1.95
ETFA-213ENST00000560309 TOMM70O94826 608 aa27.21■■□□□ 1.95
ETFA-213ENST00000560309 DDX10Q13206 875 aaKnown RBP27.21■■□□□ 1.95
ETFA-213ENST00000560309 MIS18AQ9NYP9 233 aa27.21■■□□□ 1.95
ETFA-213ENST00000560309 NBPF26B4DH59 902 aa27.2■■□□□ 1.94
ETFA-213ENST00000560309 NBPF10Q6P3W6 841 aaKnown RBP27.2■■□□□ 1.94
ETFA-213ENST00000560309 NBPF15Q8N660 670 aa27.2■■□□□ 1.94
ETFA-213ENST00000560309 ZNF622Q969S3 477 aaKnown RBP eCLIP27.2■■□□□ 1.94
ETFA-213ENST00000560309 BABAM1Q9NWV8 329 aa27.2■■□□□ 1.94
ETFA-213ENST00000560309 MYBBP1AQ9BQG0 1328 aaKnown RBP27.19■■□□□ 1.94
ETFA-213ENST00000560309 HSPA6P17066 643 aa27.19■■□□□ 1.94
ETFA-213ENST00000560309 LMNB1P20700 586 aa27.19■■□□□ 1.94
ETFA-213ENST00000560309 LMOD3Q0VAK6 560 aa27.19■■□□□ 1.94
ETFA-213ENST00000560309 TPTE2Q6XPS3 522 aa27.19■■□□□ 1.94
ETFA-213ENST00000560309 CNKSR1Q969H4 720 aa27.19■■□□□ 1.94
ETFA-213ENST00000560309 SBF1O95248 1867 aa27.19■■□□□ 1.94
ETFA-213ENST00000560309 BCORQ6W2J9 1755 aa27.18■■□□□ 1.94
ETFA-213ENST00000560309 EIF4A1P60842 406 aaKnown RBP27.18■■□□□ 1.94
ETFA-213ENST00000560309 NBPF5PQ86XG9 351 aaPredicted RBP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms