RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 NFIXQ14938 502 aa27.13■■□□□ 1.93
RABGGTA-214ENST00000560163 POLR3GLQ9BT43 218 aa27.13■■□□□ 1.93
RABGGTA-214ENST00000560163 PANK3Q9H999 370 aa27.13■■□□□ 1.93
RABGGTA-214ENST00000560163 TIMELESSQ9UNS1 1208 aa27.13■■□□□ 1.93
RABGGTA-214ENST00000560163 NARFQ9UHQ1 456 aa27.12■■□□□ 1.93
RABGGTA-214ENST00000560163 DLEC1Q9Y238 1755 aa27.12■■□□□ 1.93
RABGGTA-214ENST00000560163 VEGFAP15692 232 aaPredicted RBP27.11■■□□□ 1.93
RABGGTA-214ENST00000560163 IL13P35225 146 aa27.11■■□□□ 1.93
RABGGTA-214ENST00000560163 SLC52A2Q9HAB3 445 aa27.11■■□□□ 1.93
RABGGTA-214ENST00000560163 BCL2L12Q9HB09 334 aa27.11■■□□□ 1.93
RABGGTA-214ENST00000560163 LGR6Q9HBX8 967 aa27.11■■□□□ 1.93
RABGGTA-214ENST00000560163 TNS4Q8IZW8 715 aa27.1■■□□□ 1.93
RABGGTA-214ENST00000560163 AKAP4Q5JQC9 854 aa27.09■■□□□ 1.93
RABGGTA-214ENST00000560163 TTLL6Q8N841 843 aa27.08■■□□□ 1.93
RABGGTA-214ENST00000560163 POTECB2RU33 542 aa27.07■■□□□ 1.92
RABGGTA-214ENST00000560163 CAPN15O75808 1086 aa27.07■■□□□ 1.92
RABGGTA-214ENST00000560163 SERPINB2P05120 415 aa27.07■■□□□ 1.92
RABGGTA-214ENST00000560163 COL15A1P39059 1388 aa27.07■■□□□ 1.92
RABGGTA-214ENST00000560163 MRC1P22897 1456 aa27.06■■□□□ 1.92
RABGGTA-214ENST00000560163 SLC39A6Q13433 755 aa27.06■■□□□ 1.92
RABGGTA-214ENST00000560163 MORC1Q86VD1 984 aa27.06■■□□□ 1.92
RABGGTA-214ENST00000560163 ZBTB1Q9Y2K1 713 aa27.06■■□□□ 1.92
RABGGTA-214ENST00000560163 CCDC88AQ3V6T2 1871 aa27.06■■□□□ 1.92
RABGGTA-214ENST00000560163 NFKBIEO00221 500 aa27.05■■□□□ 1.92
RABGGTA-214ENST00000560163 RNMTO43148 476 aaKnown RBP27.04■■□□□ 1.92
RABGGTA-214ENST00000560163 TIAM2Q8IVF5 1701 aa27.04■■□□□ 1.92
RABGGTA-214ENST00000560163 HSPA1AP0DMV8 641 aaKnown RBP27.03■■□□□ 1.92
RABGGTA-214ENST00000560163 HSPA1BP0DMV9 641 aaKnown RBP27.03■■□□□ 1.92
RABGGTA-214ENST00000560163 CARMIL3Q8ND23 1372 aa27.02■■□□□ 1.92
RABGGTA-214ENST00000560163 C2CD5Q86YS7 1000 aa27.02■■□□□ 1.92
RABGGTA-214ENST00000560163 VSIG10Q8N0Z9 540 aa27.01■■□□□ 1.91
RABGGTA-214ENST00000560163 VIRMAQ69YN4 1812 aaKnown RBP27■■□□□ 1.91
RABGGTA-214ENST00000560163 H0YIN7 160 aa27■■□□□ 1.91
RABGGTA-214ENST00000560163 HSPA5P11021 654 aaKnown RBP26.97■■□□□ 1.91
RABGGTA-214ENST00000560163 EIF5P55010 431 aaKnown RBP26.97■■□□□ 1.91
RABGGTA-214ENST00000560163 UBR2Q8IWV8 1755 aa26.97■■□□□ 1.91
RABGGTA-214ENST00000560163 ANKRD31Q8N7Z5 1873 aa26.96■■□□□ 1.91
RABGGTA-214ENST00000560163 DPY19L2Q6NUT2 758 aa26.96■■□□□ 1.91
RABGGTA-214ENST00000560163 DICER1Q9UPY3 1922 aaKnown RBP26.95■■□□□ 1.9
RABGGTA-214ENST00000560163 CANXP27824 592 aaKnown RBP26.95■■□□□ 1.9
RABGGTA-214ENST00000560163 EIF4G2P78344 907 aaKnown RBP eCLIP26.95■■□□□ 1.9
RABGGTA-214ENST00000560163 FER1L6Q2WGJ9 1857 aa26.94■■□□□ 1.9
RABGGTA-214ENST00000560163 MTHFSDQ2M296 383 aaKnown RBP26.94■■□□□ 1.9
RABGGTA-214ENST00000560163 BICDL1Q6ZP65 573 aa26.93■■□□□ 1.9
RABGGTA-214ENST00000560163 HMOX1P09601 288 aa26.92■■□□□ 1.9
RABGGTA-214ENST00000560163 TBC1D9BQ66K14 1250 aa26.92■■□□□ 1.9
RABGGTA-214ENST00000560163 BRIP1Q9BX63 1249 aa26.92■■□□□ 1.9
RABGGTA-214ENST00000560163 PDZRN3Q9UPQ7 1066 aa26.92■■□□□ 1.9
RABGGTA-214ENST00000560163 KNSTRNQ9Y448 316 aa26.92■■□□□ 1.9
RABGGTA-214ENST00000560163 C21orf2O43822 256 aa26.91■■□□□ 1.9
RABGGTA-214ENST00000560163 TRIM26Q12899 539 aaPredicted RBP26.91■■□□□ 1.9
RABGGTA-214ENST00000560163 ERFEQ4G0M1 354 aa26.91■■□□□ 1.9
RABGGTA-214ENST00000560163 AMER1Q5JTC6 1135 aaPredicted RBP26.91■■□□□ 1.9
RABGGTA-214ENST00000560163 A0A087WZG4 1122 aa26.9■■□□□ 1.9
RABGGTA-214ENST00000560163 PDE6BP35913 854 aa26.9■■□□□ 1.9
RABGGTA-214ENST00000560163 COL11A2P13942 1736 aaPredicted RBP26.9■■□□□ 1.9
RABGGTA-214ENST00000560163 LTBP3Q9NS15 1303 aa26.9■■□□□ 1.9
RABGGTA-214ENST00000560163 STARD3NLO95772 234 aa26.89■■□□□ 1.9
RABGGTA-214ENST00000560163 PRR5LQ6MZQ0 368 aa26.89■■□□□ 1.9
RABGGTA-214ENST00000560163 ZNF622Q969S3 477 aaKnown RBP eCLIP26.89■■□□□ 1.9
RABGGTA-214ENST00000560163 CREBZFQ9NS37 354 aa26.89■■□□□ 1.9
RABGGTA-214ENST00000560163 CHADLQ6NUI6 762 aa26.88■■□□□ 1.89
RABGGTA-214ENST00000560163 CLSPNQ9HAW4 1339 aa26.88■■□□□ 1.89
RABGGTA-214ENST00000560163 SCN7AQ01118 1682 aa26.86■■□□□ 1.89
RABGGTA-214ENST00000560163 POTEIP0CG38 1075 aa26.86■■□□□ 1.89
RABGGTA-214ENST00000560163 POTEJP0CG39 1038 aa26.86■■□□□ 1.89
RABGGTA-214ENST00000560163 CCDC24Q8N4L8 307 aa26.86■■□□□ 1.89
RABGGTA-214ENST00000560163 ZNF496Q96IT1 587 aaPredicted RBP26.86■■□□□ 1.89
RABGGTA-214ENST00000560163 ZNF219Q9P2Y4 722 aaPredicted RBP26.86■■□□□ 1.89
RABGGTA-214ENST00000560163 TBC1D2BQ9UPU7 963 aa26.85■■□□□ 1.89
RABGGTA-214ENST00000560163 DDNO94850 711 aaPredicted RBP26.84■■□□□ 1.89
RABGGTA-214ENST00000560163 SLX4Q8IY92 1834 aa26.83■■□□□ 1.89
RABGGTA-214ENST00000560163 TTC5Q8N0Z6 440 aa26.83■■□□□ 1.89
RABGGTA-214ENST00000560163 TEX13AQ9BXU3 409 aaPredicted RBP26.83■■□□□ 1.89
RABGGTA-214ENST00000560163 TAOK3Q9H2K8 898 aa26.83■■□□□ 1.89
RABGGTA-214ENST00000560163 MKRN1Q9UHC7 482 aaKnown RBP26.83■■□□□ 1.89
RABGGTA-214ENST00000560163 HEG1Q9ULI3 1381 aa26.83■■□□□ 1.88
RABGGTA-214ENST00000560163 IL6STP40189 918 aaPredicted RBP26.82■■□□□ 1.88
RABGGTA-214ENST00000560163 ZNF790Q6PG37 636 aa26.82■■□□□ 1.88
RABGGTA-214ENST00000560163 IL17REQ8NFR9 667 aa26.82■■□□□ 1.88
RABGGTA-214ENST00000560163 SRGNP10124 158 aa26.81■■□□□ 1.88
RABGGTA-214ENST00000560163 PASKQ96RG2 1323 aa26.81■■□□□ 1.88
RABGGTA-214ENST00000560163 DIAPH1O60610 1272 aaKnown RBP26.8■■□□□ 1.88
RABGGTA-214ENST00000560163 STYK1Q6J9G0 422 aa26.8■■□□□ 1.88
RABGGTA-214ENST00000560163 CNKSR1Q969H4 720 aa26.8■■□□□ 1.88
RABGGTA-214ENST00000560163 SIPA1L3O60292 1781 aaPredicted RBP26.79■■□□□ 1.88
RABGGTA-214ENST00000560163 CAMTA2O94983 1202 aa26.79■■□□□ 1.88
RABGGTA-214ENST00000560163 PRPF40BQ6NWY9 871 aaKnown RBP26.79■■□□□ 1.88
RABGGTA-214ENST00000560163 CNTNAP1P78357 1384 aa26.79■■□□□ 1.88
RABGGTA-214ENST00000560163 ARFGEF2Q9Y6D5 1785 aa26.79■■□□□ 1.88
RABGGTA-214ENST00000560163 FOXN1O15353 648 aa26.78■■□□□ 1.88
RABGGTA-214ENST00000560163 C7orf43Q8WVR3 580 aa26.78■■□□□ 1.88
RABGGTA-214ENST00000560163 SETDB2Q96T68 719 aa26.78■■□□□ 1.88
RABGGTA-214ENST00000560163 A1BGP04217 495 aa26.77■■□□□ 1.88
RABGGTA-214ENST00000560163 CNBD1Q8NA66 436 aa26.77■■□□□ 1.88
RABGGTA-214ENST00000560163 L3MBTL3Q96JM7 780 aaPredicted RBP26.77■■□□□ 1.88
RABGGTA-214ENST00000560163 PER1O15534 1290 aaPredicted RBP26.76■■□□□ 1.87
RABGGTA-214ENST00000560163 SOGA3Q5TF21 947 aa26.76■■□□□ 1.87
RABGGTA-214ENST00000560163 MASTLQ96GX5 879 aa26.76■■□□□ 1.87
RABGGTA-214ENST00000560163 ZNF330Q9Y3S2 320 aaPredicted RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms