RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 CPS1P31327 1500 aa22.88■■□□□ 1.25
SEMA4B-215ENST00000560089 AP5Z1O43299 807 aa22.88■■□□□ 1.25
SEMA4B-215ENST00000560089 GDPD2Q9HCC8 539 aa22.88■■□□□ 1.25
SEMA4B-215ENST00000560089 ZNF446Q9NWS9 450 aa22.88■■□□□ 1.25
SEMA4B-215ENST00000560089 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 U2SURPO15042 1029 aaKnown RBP22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 BRPF1P55201 1214 aaPredicted RBP22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 FOXD4L6Q3SYB3 417 aaPredicted RBP22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 MUM1L1Q5H9M0 696 aa22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 FOXD4L3Q6VB84 417 aaPredicted RBP22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 EP400NLQ6ZTU2 488 aa22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 NEK11Q8NG66 645 aa22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 MYO1CO00159 1063 aa22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 TRIM66O15016 1216 aa22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 BRD1O95696 1058 aa22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 FBLN1P23142 703 aa22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 TCP11L2Q8N4U5 519 aa22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 BANK1Q8NDB2 785 aa22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 POLKQ9UBT6 870 aa22.87■■□□□ 1.25
SEMA4B-215ENST00000560089 HDGFL2Q7Z4V5 671 aaPredicted RBP22.86■■□□□ 1.25
SEMA4B-215ENST00000560089 ZNF592Q92610 1267 aa22.86■■□□□ 1.25
SEMA4B-215ENST00000560089 GTF3C6Q969F1 213 aa22.86■■□□□ 1.25
SEMA4B-215ENST00000560089 PPIP5K1Q6PFW1 1433 aa22.86■■□□□ 1.25
SEMA4B-215ENST00000560089 TXLNBQ8N3L3 684 aa22.86■■□□□ 1.25
SEMA4B-215ENST00000560089 TMEM57Q8N5G2 664 aa22.86■■□□□ 1.25
SEMA4B-215ENST00000560089 NFATC2IPQ8NCF5 419 aa22.86■■□□□ 1.25
SEMA4B-215ENST00000560089 BRMS1Q9HCU9 246 aa22.86■■□□□ 1.25
SEMA4B-215ENST00000560089 SMARCA5O60264 1052 aaPredicted RBP22.86■■□□□ 1.25
SEMA4B-215ENST00000560089 BMS1Q14692 1282 aaKnown RBP22.86■■□□□ 1.25
SEMA4B-215ENST00000560089 ATF7IPQ6VMQ6 1270 aa22.86■■□□□ 1.25
SEMA4B-215ENST00000560089 RUNDC1Q96C34 613 aa22.86■■□□□ 1.25
SEMA4B-215ENST00000560089 KNDC1Q76NI1 1749 aa22.85■■□□□ 1.25
SEMA4B-215ENST00000560089 KRBA2Q6ZNG9 492 aa22.85■■□□□ 1.25
SEMA4B-215ENST00000560089 USP26Q9BXU7 913 aa22.85■■□□□ 1.25
SEMA4B-215ENST00000560089 TOMM22Q9NS69 142 aa22.85■■□□□ 1.25
SEMA4B-215ENST00000560089 ZNF215Q9UL58 517 aaPredicted RBP22.85■■□□□ 1.25
SEMA4B-215ENST00000560089 GUCY2CP25092 1073 aa22.85■■□□□ 1.25
SEMA4B-215ENST00000560089 KDM4FA0A1W2PPD8 638 aa22.84■■□□□ 1.25
SEMA4B-215ENST00000560089 TEX35Q5T0J7 233 aa22.84■■□□□ 1.25
SEMA4B-215ENST00000560089 ELF2Q15723 593 aa22.84■■□□□ 1.25
SEMA4B-215ENST00000560089 USP48Q86UV5 1035 aa22.84■■□□□ 1.25
SEMA4B-215ENST00000560089 GPATCH11Q8N954 259 aa22.84■■□□□ 1.25
SEMA4B-215ENST00000560089 ZNF142P52746 1687 aaPredicted RBP22.84■■□□□ 1.25
SEMA4B-215ENST00000560089 FYB1O15117 783 aa22.83■■□□□ 1.25
SEMA4B-215ENST00000560089 TPD52L1Q16890 204 aaPredicted RBP22.83■■□□□ 1.25
SEMA4B-215ENST00000560089 SLFNL1Q499Z3 407 aa22.83■■□□□ 1.24
SEMA4B-215ENST00000560089 CT47A1Q5JQC4 288 aaPredicted RBP22.83■■□□□ 1.24
SEMA4B-215ENST00000560089 ZRANB1Q9UGI0 708 aa22.83■■□□□ 1.24
SEMA4B-215ENST00000560089 TPRNQ4KMQ1 711 aa22.82■■□□□ 1.24
SEMA4B-215ENST00000560089 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
SEMA4B-215ENST00000560089 CCDC61Q9Y6R9 512 aa22.82■■□□□ 1.24
SEMA4B-215ENST00000560089 MX1P20591 662 aa22.82■■□□□ 1.24
SEMA4B-215ENST00000560089 CEP135Q66GS9 1140 aa22.81■■□□□ 1.24
SEMA4B-215ENST00000560089 LCMT1Q9UIC8 334 aa22.81■■□□□ 1.24
SEMA4B-215ENST00000560089 PATL2C9JE40 543 aaKnown RBP22.81■■□□□ 1.24
SEMA4B-215ENST00000560089 MTHFSP49914 203 aa22.81■■□□□ 1.24
SEMA4B-215ENST00000560089 LRMPQ12912 555 aa22.81■■□□□ 1.24
SEMA4B-215ENST00000560089 GOLGA6L1Q8N7Z2 621 aa22.8■■□□□ 1.24
SEMA4B-215ENST00000560089 CCDC191Q8NCU4 936 aa22.8■■□□□ 1.24
SEMA4B-215ENST00000560089 GCC1Q96CN9 775 aa22.8■■□□□ 1.24
SEMA4B-215ENST00000560089 CFAP44Q96MT7 982 aa22.8■■□□□ 1.24
SEMA4B-215ENST00000560089 NOB1Q9ULX3 412 aaKnown RBP22.8■■□□□ 1.24
SEMA4B-215ENST00000560089 ERO1AQ96HE7 468 aa22.79■■□□□ 1.24
SEMA4B-215ENST00000560089 CEP83Q9Y592 693 aa22.79■■□□□ 1.24
SEMA4B-215ENST00000560089 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.79■■□□□ 1.24
SEMA4B-215ENST00000560089 CCDC186Q7Z3E2 898 aa22.79■■□□□ 1.24
SEMA4B-215ENST00000560089 NME9Q86XW9 330 aa22.78■■□□□ 1.24
SEMA4B-215ENST00000560089 LRRFIP2Q9Y608 721 aaKnown RBP22.78■■□□□ 1.24
SEMA4B-215ENST00000560089 HTATSF1O43719 755 aaKnown RBP22.78■■□□□ 1.24
SEMA4B-215ENST00000560089 SSH1Q8WYL5 1049 aa22.78■■□□□ 1.24
SEMA4B-215ENST00000560089 NPHP4O75161 1426 aaPredicted RBP22.78■■□□□ 1.24
SEMA4B-215ENST00000560089 ATP7BP35670 1465 aa22.77■■□□□ 1.24
SEMA4B-215ENST00000560089 CCDC172P0C7W6 258 aa22.77■■□□□ 1.24
SEMA4B-215ENST00000560089 CWC15Q9P013 229 aaKnown RBP22.77■■□□□ 1.24
SEMA4B-215ENST00000560089 JRKLQ9Y4A0 524 aa22.77■■□□□ 1.24
SEMA4B-215ENST00000560089 CT47B1P0C2W7 299 aaPredicted RBP22.77■■□□□ 1.23
SEMA4B-215ENST00000560089 GSPT1P15170 499 aaKnown RBP22.77■■□□□ 1.23
SEMA4B-215ENST00000560089 TMX3Q96JJ7 454 aa22.76■■□□□ 1.23
SEMA4B-215ENST00000560089 DRC1Q96MC2 740 aa22.76■■□□□ 1.23
SEMA4B-215ENST00000560089 CARD10Q9BWT7 1032 aa22.76■■□□□ 1.23
SEMA4B-215ENST00000560089 IQSEC2Q5JU85 1478 aa22.76■■□□□ 1.23
SEMA4B-215ENST00000560089 POLR3GO15318 223 aaPredicted RBP22.76■■□□□ 1.23
SEMA4B-215ENST00000560089 ZSCAN26Q16670 478 aa22.76■■□□□ 1.23
SEMA4B-215ENST00000560089 DRC7Q8IY82 874 aa22.76■■□□□ 1.23
SEMA4B-215ENST00000560089 FHOD1Q9Y613 1164 aa22.76■■□□□ 1.23
SEMA4B-215ENST00000560089 NPHP1O15259 732 aa22.75■■□□□ 1.23
SEMA4B-215ENST00000560089 C14orf37Q86TY3 774 aa22.75■■□□□ 1.23
SEMA4B-215ENST00000560089 TSR2Q969E8 191 aaKnown RBP22.75■■□□□ 1.23
SEMA4B-215ENST00000560089 POLR3AO14802 1390 aaPredicted RBP22.75■■□□□ 1.23
SEMA4B-215ENST00000560089 PTPRCP08575 1304 aa22.74■■□□□ 1.23
SEMA4B-215ENST00000560089 TPM4P67936 248 aa22.74■■□□□ 1.23
SEMA4B-215ENST00000560089 CCDC27Q2M243 656 aa22.74■■□□□ 1.23
SEMA4B-215ENST00000560089 GIMAP6Q6P9H5 292 aa22.74■■□□□ 1.23
SEMA4B-215ENST00000560089 DIP2AQ14689 1571 aa22.74■■□□□ 1.23
SEMA4B-215ENST00000560089 ACEP12821 1306 aa22.74■■□□□ 1.23
SEMA4B-215ENST00000560089 RNF20Q5VTR2 975 aa22.74■■□□□ 1.23
SEMA4B-215ENST00000560089 INTS3Q68E01 1043 aaKnown RBP22.74■■□□□ 1.23
SEMA4B-215ENST00000560089 ATG3Q9NT62 314 aa22.74■■□□□ 1.23
SEMA4B-215ENST00000560089 PTCH1Q13635 1447 aa22.74■■□□□ 1.23
SEMA4B-215ENST00000560089 FUCA2Q9BTY2 467 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms